Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 6.7e-221 770.4 394 100.0
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 8.3e-171 604.0 311 99.7
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 7.1e-130 468.0 373 64.9
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 1.8e-120 436.8 396 60.1
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 4.3e-119 432.2 378 59.0
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 2.8e-118 429.5 372 58.6
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 1.8e-117 426.8 377 59.4
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 3.1e-117 426.0 385 56.6
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.2e-116 424.1 378 57.7
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 2.0e-116 423.3 376 56.4
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 3.4e-116 422.5 369 58.0
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 4.5e-116 422.2 372 58.6
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 4.5e-116 422.2 372 58.6
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 4.5e-116 422.2 371 58.0
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 7.7e-116 421.4 372 58.9
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 7.7e-116 421.4 373 58.2
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 7.7e-116 421.4 372 57.3
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 1.0e-115 421.0 367 58.6
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 1.0e-115 421.0 380 57.6
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 1.3e-115 420.6 382 58.4
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 2.2e-115 419.9 372 57.3
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 2.9e-115 419.5 372 58.3
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.8e-115 419.1 384 55.7
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 3.8e-115 419.1 372 58.3
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 3.8e-115 419.1 372 57.5
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 5.0e-115 418.7 373 57.9
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 6.5e-115 418.3 372 57.8
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 8.5e-115 417.9 378 57.7
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 1.1e-114 417.5 372 57.8
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.1e-114 417.5 378 57.4
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 1.1e-114 417.5 372 57.8
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 1.9e-114 416.8 372 56.7
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.9e-114 416.8 369 56.9
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.9e-114 416.8 391 54.7
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 2.5e-114 416.4 372 57.8
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 5.5e-114 415.2 372 56.7
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 5.5e-114 415.2 388 55.2
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 7.2e-114 414.8 383 57.7
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 7.2e-114 414.8 377 56.2
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 7.2e-114 414.8 384 57.0
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 9.4e-114 414.5 377 57.0
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.6e-113 413.7 371 58.2
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 2.7e-113 412.9 388 54.6
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 2.7e-113 412.9 376 56.9
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 3.6e-113 412.5 371 57.1
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 4.7e-113 412.1 380 56.8
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 6.1e-113 411.8 378 57.7
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 7.9e-113 411.4 382 56.5
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 1.0e-112 411.0 383 55.4
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 1.4e-112 410.6 369 57.5
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 1.8e-112 410.2 397 55.2
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 1.8e-112 410.2 380 55.0
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 3.0e-112 409.5 383 55.6
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 3.0e-112 409.5 382 55.5
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 3.9e-112 409.1 374 56.1
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 6.7e-112 408.3 378 56.6
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 6.7e-112 408.3 380 55.5
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 6.7e-112 408.3 386 55.2
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 8.8e-112 407.9 378 56.3
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 1.1e-111 407.5 379 56.5
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 1.1e-111 407.5 387 54.8
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 1.5e-111 407.1 378 56.3
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 2.6e-111 406.4 373 56.0
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 3.3e-111 406.0 384 55.7
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 3.3e-111 406.0 374 57.0
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 9.7e-111 404.4 379 57.0
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 1.3e-110 404.1 376 56.4
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 1.3e-110 404.1 388 55.2
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 1.7e-110 403.7 389 55.3
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 2.2e-110 403.3 377 57.3
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 2.8e-110 402.9 361 58.2
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 3.7e-110 402.5 383 54.0
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 6.3e-110 401.7 375 57.1
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 4.1e-109 399.1 379 53.8
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 5.3e-109 398.7 369 55.8
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 5.3e-109 398.7 371 56.3
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 3.4e-108 396.0 384 54.2
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 4.5e-108 395.6 372 56.5
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 7.7e-108 394.8 373 54.2
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 2.2e-107 393.3 368 56.0
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.9e-107 392.9 374 55.6
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 3.2e-106 389.4 374 55.1
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 3.2e-106 389.4 375 53.6
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 4.2e-106 389.0 387 53.5
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 5.5e-106 388.7 371 53.4
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 9.4e-106 387.9 359 56.0
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 2.1e-105 386.7 372 53.2
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 2.7e-105 386.3 362 56.9
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 6.1e-105 385.2 365 55.9
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.3e-104 383.3 367 57.5
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 3.0e-104 382.9 373 54.2
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 6.7e-104 381.7 364 55.8
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 8.8e-104 381.3 372 55.1
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 8.8e-104 381.3 365 56.4
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 8.8e-104 381.3 365 56.4
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 2.6e-103 379.8 377 53.6
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 3.3e-103 379.4 366 54.6
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 3.3e-103 379.4 372 55.1
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 7.4e-103 378.3 365 55.3
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 2.2e-102 376.7 442 47.5
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 5.3e-101 372.1 348 55.7
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 2.0e-100 370.2 386 54.7
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 5.5e-98 362.1 390 53.6
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 2.7e-97 359.8 372 52.4
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 4.7e-97 359.0 373 50.7
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 4.0e-96 355.9 373 51.2
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 4.2e-90 335.9 383 47.8
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 1.6e-89 334.0 360 50.6
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 1.5e-87 327.4 403 46.4
Cre16.g671450 Chlamydomonas reinhardtii HOM05D005694 ORTHO05D007402 6.5e-83 312.0 393 46.1
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 2.8e-81 306.6 323 53.9
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 6.1e-81 305.4 373 44.2
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 4.4e-79 299.3 372 44.4
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 1.0e-67 261.5 247 55.9
CAN.G572.58 Capsicum annuum HOM05D005694 ORTHO05D007402 3.6e-65 253.1 278 51.1
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 8.0e-65 251.9 393 41.5
Aa31LG1G15830 Aethionema arabicum HOM05D005694 ORTHO05D007402 7.5e-63 245.4 229 53.3
FAN28G1711 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.5e-52 209.9 175 58.9
FAN28G1889 Fragaria x ananassa HOM05D005694 ORTHO05D007402 3.5e-52 209.9 175 58.9
MCO09G374 Micromonas commoda HOM05D005694 ORTHO05D007402 1.3e-51 208.0 384 38.3
Actinidia36463 Actinidia chinensis HOM05D005694 ORTHO05D007402 2.1e-41 174.1 160 53.8
Cfa023451 Carpinus fangiana HOM05D000115 ORTHO05D005317 2.4e-32 144.1 411 31.1
Lj7A77T5 Lonicera japonica HOM05D005694 ORTHO05D007402 1.5e-31 141.4 112 58.9
PRCOL_00002834 Prasinoderma coloniale HOM05D005694 ORTHO05D007402 9.9e-31 138.7 398 31.2
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.2e-29 133.7 115 60.0
Aa31sc2295G20 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.5e-28 130.2 121 54.5
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.0e-27 127.1 144 49.3
Medtr8g072720 Medicago truncatula HOM05D005694 ORTHO05D007402 2.5e-21 107.5 82 61.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.6e-09 68.2 409 24.7
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 3.7e-09 67.0 103 39.8
Cfa026332 Carpinus fangiana HOM05D005694 ORTHO05D123404 3.1e-08 63.9 340 25.9


User provided reference genes

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