Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 4.1e-130 468.0 228 100.0
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 2.9e-43 179.5 173 49.7
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.1e-42 177.6 144 53.5
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.5e-42 176.4 144 54.2
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 3.2e-42 176.0 153 51.6
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 3.2e-42 176.0 143 51.0
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 5.5e-42 175.3 144 54.2
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 7.2e-42 174.9 180 46.7
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 7.2e-42 174.9 147 53.1
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 9.4e-42 174.5 177 48.0
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 2.7e-41 172.9 144 52.8
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.7e-41 172.9 144 52.8
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.7e-41 172.9 144 52.8
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 3.6e-41 172.6 175 47.4
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 3.6e-41 172.6 144 52.8
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.6e-41 172.6 135 56.3
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.6e-41 172.6 135 56.3
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 3.6e-41 172.6 135 57.0
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 6.1e-41 171.8 177 46.9
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 1.0e-40 171.0 135 55.6
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.0e-40 171.0 177 46.9
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.0e-40 171.0 143 53.8
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 1.4e-40 170.6 135 54.1
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 1.4e-40 170.6 135 54.8
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 1.4e-40 170.6 158 50.0
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 1.8e-40 170.2 144 51.4
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 1.8e-40 170.2 163 46.6
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 2.3e-40 169.9 144 51.4
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 3.0e-40 169.5 135 54.8
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 4.0e-40 169.1 143 51.7
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 4.0e-40 169.1 135 53.3
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 5.2e-40 168.7 154 48.7
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 6.8e-40 168.3 140 51.4
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.2e-39 167.5 177 45.8
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 1.5e-39 167.2 140 51.4
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.5e-39 167.2 143 50.3
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 1.5e-39 167.2 192 41.7
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 2.0e-39 166.8 143 50.3
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 2.0e-39 166.8 143 50.3
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 2.0e-39 166.8 143 50.3
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 2.6e-39 166.4 143 51.0
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 2.6e-39 166.4 143 49.0
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.6e-39 166.4 135 51.9
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 3.4e-39 166.0 143 49.7
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 3.4e-39 166.0 196 42.9
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 3.4e-39 166.0 147 50.3
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 5.7e-39 165.2 143 49.0
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 5.7e-39 165.2 135 52.6
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 5.7e-39 165.2 143 49.7
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 7.5e-39 164.9 194 42.8
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 1.7e-38 163.7 143 48.3
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 1.7e-38 163.7 135 51.9
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.7e-38 163.7 164 46.3
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 1.7e-38 163.7 135 52.6
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 2.2e-38 163.3 143 49.0
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 2.2e-38 163.3 143 49.0
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 2.2e-38 163.3 143 49.7
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.2e-38 163.3 140 49.3
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 2.2e-38 163.3 178 44.4
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 2.8e-38 162.9 143 50.3
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 2.8e-38 162.9 178 45.5
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 3.7e-38 162.5 135 51.9
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 4.9e-38 162.2 143 47.6
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 6.3e-38 161.8 143 47.6
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 6.3e-38 161.8 143 50.3
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 6.3e-38 161.8 143 50.3
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 6.3e-38 161.8 171 44.4
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 6.3e-38 161.8 135 51.9
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 6.3e-38 161.8 171 44.4
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 8.3e-38 161.4 143 49.7
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 8.3e-38 161.4 143 47.6
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 8.3e-38 161.4 140 50.0
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 8.3e-38 161.4 153 45.1
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 8.3e-38 161.4 143 49.0
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.1e-37 161.0 143 48.3
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.4e-37 160.6 171 43.3
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.8e-37 160.2 143 48.3
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 1.8e-37 160.2 140 48.6
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 2.4e-37 159.8 167 46.1
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 3.1e-37 159.5 178 44.4
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 3.1e-37 159.5 178 44.4
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 4.1e-37 159.1 177 43.5
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 4.1e-37 159.1 135 51.1
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 5.4e-37 158.7 178 44.4
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 5.4e-37 158.7 174 45.4
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 9.1e-37 157.9 143 47.6
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 7.7e-36 154.8 147 48.3
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 2.9e-35 152.9 129 51.9
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 1.1e-34 151.0 159 46.5
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 1.5e-34 150.6 135 48.9
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.3e-34 149.4 134 47.8
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 2.1e-33 146.7 135 47.4
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 4.4e-31 139.0 144 41.7
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 2.9e-30 136.3 130 46.9
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 4.1e-29 132.5 128 46.9
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 2.3e-27 126.7 152 38.8
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.5e-26 124.0 126 42.1
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 1.8e-24 117.1 132 38.6
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 4.1e-21 105.9 79 58.2
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 9.2e-21 104.8 106 46.2
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 3.9e-19 99.4 136 38.2
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 4.3e-18 95.9 52 71.2
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 6.8e-16 88.6 149 34.2
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 7.3e-10 68.6 53 56.6
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.5e-07 60.8 73 38.4
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.0e-07 60.5 101 33.7


User provided reference genes

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