Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 0.0e+00 1108.6 607 100.0
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 7.6e-123 445.3 492 51.4
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 3.4e-107 393.3 480 47.3
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 8.5e-106 388.7 499 46.3
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.7e-93 347.8 549 38.1
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 2.2e-90 337.4 447 42.5
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 1.6e-88 331.3 463 42.8
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 5.7e-86 322.8 435 40.5
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 4.2e-81 306.6 753 31.7
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.2e-80 305.1 435 39.1
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 5.7e-78 296.2 433 39.0
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 9.1e-76 288.9 430 37.9
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 2.3e-74 284.3 434 38.0
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 5.0e-74 283.1 430 38.8
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 6.6e-74 282.7 431 38.3
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 8.6e-74 282.3 434 36.6
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 1.1e-73 282.0 431 38.3
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 1.5e-73 281.6 430 38.6
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.5e-73 281.6 434 37.1
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 2.5e-73 280.8 430 37.2
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 3.3e-73 280.4 430 37.9
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 4.2e-73 280.0 434 36.6
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 4.2e-73 280.0 435 36.8
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 5.5e-73 279.6 430 38.6
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 2.1e-72 277.7 430 37.2
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 2.1e-72 277.7 427 36.5
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 4.7e-72 276.6 435 37.7
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 4.7e-72 276.6 433 36.7
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 6.1e-72 276.2 436 37.8
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 6.1e-72 276.2 435 37.7
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 6.1e-72 276.2 431 36.2
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 1.4e-71 275.0 436 37.8
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 1.4e-71 275.0 434 35.5
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 1.4e-71 275.0 435 36.8
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 2.3e-71 274.2 434 36.4
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 2.3e-71 274.2 428 36.0
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 2.3e-71 274.2 435 37.2
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 4.0e-71 273.5 446 38.3
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 6.8e-71 272.7 421 36.8
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 1.5e-70 271.6 434 35.9
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 3.4e-70 270.4 433 36.7
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 9.8e-70 268.9 428 36.4
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 9.8e-70 268.9 471 34.8
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 1.3e-69 268.5 421 37.1
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 1.7e-69 268.1 431 36.7
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 1.7e-69 268.1 426 36.4
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 2.2e-69 267.7 435 35.2
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 2.2e-69 267.7 455 36.5
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 2.9e-69 267.3 435 36.3
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 3.7e-69 266.9 436 36.2
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 4.9e-69 266.5 429 35.7
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 4.9e-69 266.5 489 36.4
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 1.1e-68 265.4 490 35.1
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 2.4e-68 264.2 426 35.7
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 3.2e-68 263.8 436 36.5
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 3.2e-68 263.8 435 35.6
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 3.2e-68 263.8 434 36.4
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 4.1e-68 263.5 421 35.6
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 1.2e-67 261.9 436 36.0
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 2.0e-67 261.2 451 36.6
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 2.7e-67 260.8 442 34.8
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 2.7e-67 260.8 433 36.7
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 4.6e-67 260.0 432 35.2
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 4.6e-67 260.0 498 34.7
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 1.3e-66 258.5 435 35.4
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.3e-66 258.5 427 37.2
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 2.3e-66 257.7 498 34.1
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 2.9e-66 257.3 434 34.8
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 8.6e-66 255.8 496 34.1
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 8.6e-66 255.8 433 37.0
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 1.1e-65 255.4 423 36.2
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 2.5e-65 254.2 492 33.7
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 2.5e-65 254.2 492 33.7
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 2.5e-65 254.2 425 37.2
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 3.3e-65 253.8 433 33.9
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 3.3e-65 253.8 433 35.8
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 3.3e-65 253.8 425 36.9
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 3.3e-65 253.8 425 35.1
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 5.6e-65 253.1 427 34.9
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 7.3e-65 252.7 512 33.4
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 9.5e-65 252.3 503 34.0
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 2.1e-64 251.1 430 35.1
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 2.8e-64 250.8 504 33.7
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 3.6e-64 250.4 449 34.1
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 4.7e-64 250.0 439 36.4
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 4.7e-64 250.0 502 33.3
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 6.2e-64 249.6 425 36.2
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 8.0e-64 249.2 434 35.5
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 1.0e-63 248.8 505 33.1
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 2.3e-63 247.7 429 34.7
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 3.1e-63 247.3 450 35.1
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 5.2e-63 246.5 436 36.0
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 5.8e-62 243.0 471 33.8
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 9.8e-62 242.3 423 34.5
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 1.1e-60 238.8 384 36.7
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 4.1e-60 236.9 433 33.5
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 2.3e-58 231.1 433 32.1
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 2.5e-57 227.6 444 34.5
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 3.3e-57 227.3 395 34.4
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 4.7e-56 223.4 441 32.4
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 1.8e-55 221.5 445 31.5
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 2.9e-53 214.2 428 33.2
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 3.7e-53 213.8 416 31.7
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 6.6e-50 203.0 433 32.3
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 2.8e-48 197.6 199 47.2
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 1.8e-47 194.9 396 31.1
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 5.8e-46 189.9 201 46.8
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 1.7e-45 188.3 399 30.8
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 2.5e-41 174.5 430 29.5
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 7.3e-41 172.9 198 46.0
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 3.1e-39 167.5 158 48.1
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 4.0e-39 167.2 156 49.4
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 1.4e-36 158.7 198 41.4
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 1.1e-33 149.1 148 51.4
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 9.6e-33 146.0 166 45.8
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 9.0e-31 139.4 116 56.0
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 6.0e-27 126.7 357 28.9
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 1.3e-21 109.0 102 54.9
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 2.6e-14 84.7 126 35.7
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 1.3e-10 72.4 165 36.4
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 1.4e-07 62.4 72 37.5
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 9.0e-07 59.7 58 44.8
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 1.2e-06 59.3 72 37.5


User provided reference genes

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