Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 2.7e-211 738.4 374 100.0
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 7.8e-86 321.6 381 47.8
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 3.2e-71 273.1 386 41.7
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 5.5e-71 272.3 392 42.3
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 6.7e-69 265.4 393 41.5
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 1.1e-68 264.6 389 40.6
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 4.3e-68 262.7 387 39.5
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 9.6e-68 261.5 392 42.1
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 9.6e-68 261.5 392 42.1
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 1.3e-67 261.2 389 42.2
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 3.7e-67 259.6 390 40.8
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 8.2e-67 258.5 391 40.2
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.1e-66 258.1 388 41.0
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 1.4e-66 257.7 388 39.7
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 2.4e-66 256.9 387 39.3
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 2.4e-66 256.9 391 39.4
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 3.1e-66 256.5 395 41.3
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 4.0e-66 256.1 388 39.7
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 5.3e-66 255.8 387 40.1
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 6.9e-66 255.4 389 39.3
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 6.9e-66 255.4 385 42.1
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 9.0e-66 255.0 389 39.3
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 1.2e-65 254.6 388 39.9
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 2.6e-65 253.4 389 39.1
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 7.6e-65 251.9 395 39.7
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 1.3e-64 251.1 385 41.0
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 4.9e-64 249.2 389 38.8
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 6.5e-64 248.8 391 39.4
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 8.4e-64 248.4 389 38.6
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 2.5e-63 246.9 388 39.9
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 4.2e-63 246.1 390 39.5
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 4.2e-63 246.1 390 39.5
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 1.2e-62 244.6 392 39.5
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.7e-62 243.4 384 39.1
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 3.5e-62 243.0 389 38.6
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 4.6e-62 242.7 388 38.9
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 4.6e-62 242.7 388 37.6
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 2.3e-61 240.4 387 37.7
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 3.0e-61 240.0 391 40.2
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 5.1e-61 239.2 382 38.5
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 6.7e-61 238.8 389 38.8
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 1.1e-60 238.0 389 39.1
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 1.1e-60 238.0 391 38.6
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 4.3e-60 236.1 383 37.3
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 7.4e-60 235.3 397 37.3
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 7.4e-60 235.3 380 39.2
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 9.7e-60 235.0 391 37.1
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 9.7e-60 235.0 391 37.1
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 1.3e-59 234.6 389 39.8
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.2e-59 233.8 391 36.8
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.8e-59 233.4 395 39.0
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 2.8e-59 233.4 382 39.5
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 4.8e-59 232.6 386 38.9
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 6.3e-59 232.3 385 38.7
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 6.3e-59 232.3 383 37.1
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 3.4e-57 226.5 382 38.7
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 5.9e-57 225.7 386 36.5
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 5.9e-57 225.7 391 38.6
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 7.7e-57 225.3 374 40.6
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 1.3e-56 224.6 390 37.2
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 2.9e-56 223.4 391 38.4
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 5.0e-56 222.6 392 37.5
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 6.5e-56 222.2 386 36.0
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 6.5e-56 222.2 328 39.9
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 6.5e-56 222.2 391 36.8
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 6.5e-56 222.2 391 36.8
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 1.4e-55 221.1 387 38.2
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 1.9e-55 220.7 408 38.0
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 3.2e-55 219.9 390 36.9
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 4.2e-55 219.5 388 36.1
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 4.2e-55 219.5 390 37.2
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 1.2e-54 218.0 401 36.9
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 1.6e-54 217.6 383 37.9
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 3.6e-54 216.5 387 38.0
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 4.6e-54 216.1 381 37.3
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 4.6e-54 216.1 395 37.2
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.0e-53 214.9 384 35.9
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 2.3e-53 213.8 395 37.0
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 3.0e-53 213.4 392 36.5
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 3.9e-53 213.0 391 35.8
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 8.8e-53 211.8 388 38.7
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 3.3e-52 209.9 391 37.1
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 4.3e-52 209.5 394 36.3
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 7.4e-52 208.8 388 36.6
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 1.7e-51 207.6 390 36.4
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 1.7e-51 207.6 398 36.7
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 2.8e-51 206.8 387 35.1
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 3.7e-51 206.5 390 36.2
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 4.8e-51 206.1 411 35.0
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 4.8e-51 206.1 344 37.5
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 1.8e-50 204.1 387 36.7
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.2e-49 201.4 385 34.5
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 1.2e-49 201.4 371 39.1
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.5e-49 201.1 411 34.1
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 1.3e-48 198.0 348 38.8
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 3.7e-43 179.9 235 43.4
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 1.1e-42 178.3 293 38.9
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 1.0e-37 161.8 322 36.6
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 2.2e-35 154.1 259 37.5
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 4.5e-33 146.4 200 39.5
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 2.2e-32 144.1 271 35.4
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 2.1e-30 137.5 239 40.2
AagrBONN_evm.TU.Sc2ySwM_368.1687 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.3e-27 128.3 159 39.6
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 3.1e-26 123.6 148 50.0
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 1.0e-24 118.6 149 48.3
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 1.0e-24 118.6 381 28.6
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 5.5e-23 112.8 146 47.9
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 7.2e-23 112.5 149 48.3
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 8.8e-21 105.5 176 33.5
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.3e-19 101.7 162 37.7
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 3.0e-13 80.5 268 27.2
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 9.8e-12 75.5 159 30.8
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 1.7e-11 74.7 160 29.4
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.1e-10 72.0 87 42.5
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 7.0e-10 69.3 428 25.2
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 3.5e-09 67.0 167 26.3
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.5e-07 61.6 184 26.6
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 9.5e-07 58.9 154 30.5
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.1e-06 57.8 184 26.1


User provided reference genes

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