Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 0.0e+00 1112.4 549 100.0
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 4.9e-254 880.9 542 78.4
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 4.0e-248 861.3 537 77.3
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 7.9e-244 847.0 537 74.7
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 2.3e-235 818.9 538 72.3
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 9.7e-234 813.5 541 72.6
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 1.0e-230 803.5 540 70.4
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.4e-224 783.1 547 69.5
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 5.3e-224 781.2 536 69.4
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 5.3e-224 781.2 547 68.7
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 9.1e-224 780.4 547 68.9
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 1.5e-223 779.6 547 68.9
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 2.0e-223 779.2 536 69.0
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 2.0e-223 779.2 543 69.2
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 3.4e-223 778.5 536 69.0
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 3.4e-223 778.5 558 68.1
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 7.7e-223 777.3 543 69.1
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 1.0e-222 776.9 536 69.0
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.0e-222 776.9 547 69.1
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 1.0e-222 776.9 559 67.6
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.3e-222 776.5 547 68.0
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 1.3e-222 776.5 547 68.6
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.7e-222 776.2 536 68.5
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 1.7e-222 776.2 535 69.2
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 2.2e-222 775.8 555 67.6
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 2.9e-222 775.4 555 67.4
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 2.9e-222 775.4 541 69.3
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 3.8e-222 775.0 558 68.5
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 5.0e-222 774.6 544 68.4
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 6.5e-222 774.2 543 68.0
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.1e-221 773.5 547 67.6
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 1.9e-221 772.7 554 67.1
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.5e-221 772.3 544 68.2
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 2.5e-221 772.3 547 68.6
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 3.2e-221 771.9 547 68.6
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 4.2e-221 771.5 539 67.5
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 4.2e-221 771.5 542 68.5
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 4.2e-221 771.5 547 67.3
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 4.2e-221 771.5 539 67.2
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 4.2e-221 771.5 555 67.2
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 4.2e-221 771.5 547 68.4
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 5.5e-221 771.2 547 68.2
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 7.2e-221 770.8 541 67.8
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 9.4e-221 770.4 536 69.0
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.2e-220 770.0 547 68.4
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 2.1e-220 769.2 539 67.3
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 2.7e-220 768.8 544 68.2
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 2.7e-220 768.8 536 68.5
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 4.7e-220 768.1 539 67.0
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 6.1e-220 767.7 538 67.1
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 6.1e-220 767.7 535 68.8
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 7.9e-220 767.3 547 68.0
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 1.0e-219 766.9 539 66.4
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 1.0e-219 766.9 544 67.1
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 1.0e-219 766.9 535 67.1
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 1.8e-219 766.1 537 67.8
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 1.8e-219 766.1 535 68.8
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 2.3e-219 765.8 536 68.1
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 3.0e-219 765.4 538 67.3
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 3.9e-219 765.0 535 67.5
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 5.1e-219 764.6 547 68.0
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 6.7e-219 764.2 538 66.7
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 8.8e-219 763.8 539 66.6
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 1.5e-218 763.1 543 67.2
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 2.0e-218 762.7 539 66.8
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 2.0e-218 762.7 540 66.9
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 2.6e-218 762.3 536 67.5
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 2.6e-218 762.3 536 67.5
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 4.4e-218 761.5 540 68.0
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 7.4e-218 760.8 546 67.8
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 7.4e-218 760.8 541 67.5
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 1.3e-217 760.0 538 68.2
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 2.2e-217 759.2 535 68.2
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 6.3e-217 757.7 544 66.5
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 6.3e-217 757.7 539 66.2
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 8.2e-217 757.3 542 66.8
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 1.1e-216 756.9 536 66.6
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 1.4e-216 756.5 566 64.7
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 1.8e-216 756.1 536 67.4
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 2.4e-216 755.7 536 66.0
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 7.0e-216 754.2 536 65.9
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 4.5e-215 751.5 536 68.3
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 5.9e-215 751.1 536 66.8
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 1.7e-214 749.6 536 66.2
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 2.9e-214 748.8 540 67.2
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 3.8e-214 748.4 536 68.1
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 3.8e-214 748.4 536 65.3
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 8.5e-214 747.3 536 65.1
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.1e-213 746.9 535 66.7
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 1.4e-213 746.5 546 65.4
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 1.9e-213 746.1 547 66.2
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 2.5e-213 745.7 536 67.7
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 7.2e-213 744.2 571 62.3
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 9.4e-213 743.8 536 65.5
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 1.2e-212 743.4 521 68.5
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.6e-212 743.0 547 66.0
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 3.6e-212 741.9 539 66.6
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 4.7e-212 741.5 535 65.0
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 2.3e-211 739.2 536 65.5
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 7.4e-210 734.2 536 64.6
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 1.7e-209 733.0 536 64.7
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 2.2e-209 732.6 538 65.4
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 5.9e-207 724.5 540 63.1
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 2.3e-203 712.6 503 68.4
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 3.0e-203 712.2 492 68.3
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.7e-201 706.4 536 63.4
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.8e-201 705.7 536 63.2
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 6.3e-201 704.5 559 62.3
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 1.4e-200 703.4 536 63.6
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.3e-193 680.2 540 61.7
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 3.7e-193 678.7 536 61.6
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 6.3e-193 677.9 513 64.7
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 7.0e-192 674.5 554 61.4
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 9.1e-192 674.1 552 61.1
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 2.4e-184 649.4 546 60.6
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 1.3e-182 643.7 538 59.7
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 1.5e-181 640.2 444 69.1
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 4.0e-171 605.5 424 69.3
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 5.4e-168 595.1 535 56.6
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 1.3e-166 590.5 413 69.5
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 9.5e-165 584.3 533 55.3
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 9.5e-165 584.3 533 55.3
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 9.9e-162 574.3 544 56.4
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 8.4e-145 518.1 603 48.8
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 4.9e-129 465.7 323 68.7
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 4.2e-128 462.6 323 69.0
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.3e-118 431.0 298 70.1
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 4.1e-115 419.5 543 44.8
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 1.3e-113 414.5 281 70.8
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 2.6e-93 347.1 329 54.1
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 2.2e-92 344.0 256 61.7
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 5.9e-82 309.3 199 73.9
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 5.0e-81 306.2 335 51.6
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.2e-67 260.4 498 36.3
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 1.3e-49 201.8 183 50.3
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 5.8e-45 186.4 140 67.1
PGSC0003DMG402015193 Solanum tuberosum HOM05D004694 ORTHO05D016782 5.4e-43 179.9 133 66.9
BcaC08g44622 Brassica carinata HOM05D004694 ORTHO05D016782 3.1e-38 164.1 168 50.0
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 1.5e-37 161.8 134 56.0
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 8.4e-36 156.0 119 62.2
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 2.4e-35 154.5 113 60.2
A03p11210 Brassica napus HOM05D004694 ORTHO05D016782 7.1e-35 152.9 124 56.5
C06p36560 Brassica napus HOM05D004694 ORTHO05D016782 7.1e-35 152.9 124 56.5
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 3.9e-33 147.1 109 60.6
C06p20980 Brassica napus HOM05D004694 ORTHO05D016782 6.2e-31 139.8 115 56.5
BolC6t37284H Brassica oleracea HOM05D004694 ORTHO05D016782 6.2e-31 139.8 115 56.5
A09p39550 Brassica napus HOM05D004694 ORTHO05D016782 1.8e-30 138.3 116 55.2
BraA01t01659Z Brassica rapa HOM05D004694 ORTHO05D016782 1.8e-30 138.3 116 55.2
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 2.6e-29 134.4 109 54.1
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 5.8e-29 133.3 124 51.6
Glyma.05G045851 Glycine max HOM05D004694 ORTHO05D046692 2.9e-28 131.0 95 62.1
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 3.8e-28 130.6 76 73.7
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 2.1e-18 98.2 72 58.3
Ca_03499_v3 Cicer arietinum L. HOM05D004694 ORTHO05D016782 1.9e-16 91.7 79 53.2
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 4.3e-16 90.5 76 56.6
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 2.8e-15 87.8 113 45.1
Glyma.19G088650 Glycine max HOM05D004694 ORTHO05D213888 2.6e-13 81.3 57 63.2
MD14G1161800 Malus domestica HOM05D004694 ORTHO05D016782 4.3e-08 63.9 52 55.8


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