Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0147s0014 Marchantia polymorpha HOM05D005415 ORTHO05D006242 0.0e+00 1303.1 748 100.0
SGA_v2.0_scaffold414G51200 Striga asiatica HOM05D005415 ORTHO05D006242 1.2e-74 285.4 752 32.0
Migut.I00557 Erythranthe guttata HOM05D005415 ORTHO05D006242 3.8e-71 273.9 724 32.0
Peaxi162Scf00047g00185 Petunia axillaris HOM05D005415 ORTHO05D006242 2.7e-69 267.7 737 30.7
MSTRG.22895 Avicennia marina HOM05D005415 ORTHO05D006242 6.0e-69 266.5 675 31.9
CsaV3_1G000400 Cucumis sativus L. HOM05D005415 ORTHO05D006242 6.0e-69 266.5 701 30.8
Phvul.002G284900 Phaseolus vulgaris HOM05D005415 ORTHO05D006242 1.0e-68 265.8 702 30.3
Sopen12g001850 Solanum pennellii HOM05D005415 ORTHO05D006242 2.3e-68 264.6 739 30.7
PGSC0003DMG400013896 Solanum tuberosum HOM05D005415 ORTHO05D006242 5.1e-68 263.5 693 30.6
Aqoxy3G01618 Aquilegia oxysepala HOM05D005415 ORTHO05D006242 1.5e-67 261.9 729 31.0
Lj4g0026231 Lotus japonicus HOM05D005415 ORTHO05D006242 3.3e-67 260.8 723 30.2
Thecc.03G133700 Theobroma cacao HOM05D005415 ORTHO05D006242 3.3e-67 260.8 714 30.4
Nitab4.5_0001213g0090 Nicotiana tabacum HOM05D005415 ORTHO05D006242 2.1e-66 258.1 726 30.7
Atru.chr6.1849 Acer truncatum HOM05D005415 ORTHO05D006242 2.8e-66 257.7 709 29.8
Dinv11193 Davidia involucrata HOM05D005415 ORTHO05D006242 2.8e-66 257.7 675 29.9
THA.LOC104798938 Tarenaya hassleriana HOM05D005415 ORTHO05D006242 4.7e-66 256.9 756 31.0
MELO3C026191.2 Cucumis melo HOM05D005415 ORTHO05D006242 6.2e-66 256.5 767 30.4
SalBow5G0795 Salvia bowleyana HOM05D005415 ORTHO05D006242 6.2e-66 256.5 703 32.3
Sed0003726 Sechium edule HOM05D005415 ORTHO05D006242 8.1e-66 256.1 735 29.7
Solyc12g005900.3 Solanum lycopersicum HOM05D005415 ORTHO05D006242 2.4e-65 254.6 746 30.7
Eucgr.B00088 Eucalyptus grandis HOM05D005415 ORTHO05D006242 4.0e-65 253.8 672 30.7
Cc10_g14800 Coffea canephora HOM05D005415 ORTHO05D006242 6.9e-65 253.1 670 30.7
PSO017G0412 Papaver somniferum HOM05D005415 ORTHO05D006242 2.0e-64 251.5 673 40.3
GSVIVG01008582001 Vitis vinifera HOM05D005415 ORTHO05D006242 2.0e-64 251.5 744 31.2
VMungo0251G3541 Vigna mungo HOM05D005415 ORTHO05D006242 2.6e-64 251.1 697 30.1
QL10p002178 Quercus lobata HOM05D005415 ORTHO05D006242 4.4e-64 250.4 684 30.3
RcHm_v2.0_Chr7g0189541 Rosa chinensis HOM05D005415 ORTHO05D006242 4.4e-64 250.4 759 30.4
Duzib068G0666 Durio zibethinus HOM05D005415 ORTHO05D006242 7.6e-64 249.6 718 29.4
Glyma.08G010700 Glycine max HOM05D005415 ORTHO05D006242 9.9e-64 249.2 752 35.4
COL.COLO4_16633 Corchorus olitorius HOM05D005415 ORTHO05D006242 2.2e-63 248.1 748 29.3
PSO478G2612 Papaver somniferum HOM05D005415 ORTHO05D006242 2.2e-63 248.1 781 37.5
CiPaw.13G052100 Carya illinoinensis HOM05D005415 ORTHO05D006242 3.8e-63 247.3 675 29.9
PGR083G0902 Punica granatum HOM05D005415 ORTHO05D006242 3.8e-63 247.3 665 32.0
FAN19G3201 Fragaria x ananassa HOM05D005415 ORTHO05D006242 6.4e-63 246.5 689 30.5
Gorai.001G056700 Gossypium raimondii HOM05D005415 ORTHO05D006242 6.4e-63 246.5 716 30.6
arahy.Tifrunner.gnm1.ann1.NCF6IW Arachis hypogaea HOM05D005415 ORTHO05D006242 4.2e-62 243.8 740 32.6
FvH4_1g26610 Fragaria vesca HOM05D005415 ORTHO05D006242 5.4e-62 243.4 689 30.2
Gohir.D07G053600 Gossypium hirsutum HOM05D005415 ORTHO05D006242 7.1e-62 243.0 716 30.4
TAR629G2415 Trochodendron aralioides HOM05D005415 ORTHO05D006242 7.1e-62 243.0 667 29.1
Pp3c4_19920 Physcomitrium patens HOM05D005415 ORTHO05D006242 1.2e-61 242.3 667 32.8
FAN26G2295 Fragaria x ananassa HOM05D005415 ORTHO05D006242 1.6e-61 241.9 683 30.9
HanXRQChr09g0273461 Helianthus annuus HOM05D005415 ORTHO05D006242 2.1e-61 241.5 730 28.4
AL8G40620 Arabidopsis lyrata HOM05D005415 ORTHO05D006242 2.7e-61 241.1 689 30.3
Psat7g037120 Pisum sativum HOM05D005415 ORTHO05D006242 2.7e-61 241.1 753 35.5
EL10Ac5g11383 Beta vulgaris HOM05D005415 ORTHO05D006242 3.5e-61 240.7 733 29.2
Lsat_1_v5_gn_4_82521 Lactuca sativa HOM05D005415 ORTHO05D006242 4.6e-61 240.4 667 35.1
CARHR277400 Cardamine hirsuta HOM05D005415 ORTHO05D006242 7.8e-61 239.6 674 29.8
Ciclev10031056m.g Citrus clementina HOM05D005415 ORTHO05D006242 7.8e-61 239.6 703 28.9
Nitab4.5_0003683g0010 Nicotiana tabacum HOM05D005415 ORTHO05D006242 7.8e-61 239.6 686 35.6
Oeu030666.2 Olea europaea HOM05D005415 ORTHO05D006242 7.8e-61 239.6 860 28.5
unitig_8.g4692 Utricularia gibba HOM05D005415 ORTHO05D006242 1.0e-60 239.2 682 31.4
ECA232G0893 Erigeron canadensis HOM05D005415 ORTHO05D006242 1.3e-60 238.8 690 38.0
Sabra15G0120800 Salix brachista HOM05D005415 ORTHO05D006242 1.7e-60 238.4 689 30.6
Aa31LG1G18400 Aethionema arabicum HOM05D005415 ORTHO05D006242 3.0e-60 237.7 702 29.1
SMO146G0239 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 5.1e-60 236.9 636 30.0
AagrBONN_evm.TU.Sc2ySwM_117.2504 Anthoceros agrestis HOM05D005415 ORTHO05D006242 6.6e-60 236.5 733 30.7
BcaC04g23337 Brassica carinata HOM05D005415 ORTHO05D006242 6.6e-60 236.5 690 29.3
Lalb_Chr13g0297171 Lupinus albus HOM05D005415 ORTHO05D006242 8.7e-60 236.1 755 27.2
MD14G1152700 Malus domestica HOM05D005415 ORTHO05D006242 8.7e-60 236.1 697 29.7
Potri.015G100200 Populus trichocarpa HOM05D005415 ORTHO05D006242 8.7e-60 236.1 700 30.7
Thhalv10003815m.g Eutrema salsugineum HOM05D005415 ORTHO05D006242 1.1e-59 235.7 689 28.9
Sp2g26630 Schrenkiella parvula HOM05D005415 ORTHO05D006242 1.5e-59 235.3 673 29.3
ATR0582G259 Amborella trichopoda HOM05D005415 ORTHO05D006242 1.9e-59 235.0 720 38.1
Actinidia18334 Actinidia chinensis HOM05D005415 ORTHO05D006242 2.5e-59 234.6 684 37.7
AUR62043951 Chenopodium quinoa HOM05D005415 ORTHO05D006242 3.3e-59 234.2 705 28.5
AUR62038846 Chenopodium quinoa HOM05D005415 ORTHO05D006242 4.3e-59 233.8 701 29.4
SMO173G0006 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 7.3e-59 233.0 636 29.9
BcaB04g19924 Brassica carinata HOM05D005415 ORTHO05D006242 9.6e-59 232.6 695 29.6
HPP92_021709 Vanilla planifolia HOM05D005415 ORTHO05D006242 9.6e-59 232.6 742 27.9
C09p09400 Brassica napus HOM05D005415 ORTHO05D006242 1.6e-58 231.9 691 29.2
Ca_17566_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 2.8e-58 231.1 716 27.7
Ca_29727_v3 Cicer arietinum L. HOM05D005415 ORTHO05D006242 2.8e-58 231.1 716 27.7
AT5G63540 Arabidopsis thaliana HOM05D005415 ORTHO05D006242 3.6e-58 230.7 754 28.9
Cpa.g.sc4.162 Carica papaya HOM05D005415 ORTHO05D006242 3.6e-58 230.7 243 51.9
Lj9C481T20 Lonicera japonica HOM05D005415 ORTHO05D006242 4.8e-58 230.3 693 29.6
HPP92_021694 Vanilla planifolia HOM05D005415 ORTHO05D006242 1.4e-57 228.8 769 27.6
Prupe.5G147700 Prunus persica HOM05D005415 ORTHO05D006242 1.8e-57 228.4 683 30.6
AUR62029576 Chenopodium quinoa HOM05D005415 ORTHO05D006242 2.4e-57 228.0 684 28.5
Sc10g0010570 Simmondsia chinensis HOM05D005415 ORTHO05D006242 5.3e-57 226.9 666 28.4
A09p08330 Brassica napus HOM05D005415 ORTHO05D006242 9.0e-57 226.1 766 29.8
Actinidia25556 Actinidia chinensis HOM05D005415 ORTHO05D006242 2.0e-56 224.9 274 47.1
Carub.0008s2427 Capsella rubella HOM05D005415 ORTHO05D006242 2.0e-56 224.9 673 28.8
DCAR_021639 Daucus carota HOM05D005415 ORTHO05D006242 2.6e-56 224.6 256 50.4
CANSAT25G2590 Cannabis sativa HOM05D005415 ORTHO05D006242 4.5e-56 223.8 677 30.4
MBI07_g01996_MAGBIO Magnolia biondii HOM05D005415 ORTHO05D006242 5.8e-56 223.4 722 36.8
arahy.Tifrunner.gnm1.ann1.MQVT4E Arachis hypogaea HOM05D005415 ORTHO05D006242 9.9e-56 222.6 766 36.4
FAN28G1156 Fragaria x ananassa HOM05D005415 ORTHO05D006242 9.9e-56 222.6 687 29.8
Hund02456 Selenicereus undatus HOM05D005415 ORTHO05D006242 9.9e-56 222.6 740 28.8
Zm00001eb085270 Zea mays HOM05D005415 ORTHO05D006242 9.9e-56 222.6 682 29.6
ClCG06G018070 Citrullus lanatus HOM05D005415 ORTHO05D006242 1.7e-55 221.9 723 31.5
CSS0000208 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 2.9e-55 221.1 235 49.4
FAN23G0140 Fragaria x ananassa HOM05D005415 ORTHO05D006242 3.8e-55 220.7 669 31.2
BolC9t53852H Brassica oleracea HOM05D005415 ORTHO05D006242 6.4e-55 219.9 705 28.4
Haze_07175 Corylus avellana HOM05D005415 ORTHO05D006242 6.4e-55 219.9 243 49.4
TPR.G12905 Trifolium pratense HOM05D005415 ORTHO05D006242 1.9e-54 218.4 244 50.4
Cfa018765 Carpinus fangiana HOM05D005415 ORTHO05D006242 4.2e-54 217.2 677 29.1
CDE05G0217 Ceratophyllum demersum HOM05D005415 ORTHO05D006242 1.2e-53 215.7 719 35.3
BraA09t36482Z Brassica rapa HOM05D005415 ORTHO05D006242 6.0e-53 213.4 779 28.9
SMO146G0204 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 6.0e-53 213.4 231 50.2
Medtr8g096570 Medicago truncatula HOM05D005415 ORTHO05D006242 1.9e-51 208.4 781 34.4
Gohir.A07G049320 Gossypium hirsutum HOM05D005415 ORTHO05D006242 2.5e-51 208.0 187 57.8
Rhsim08G0192500 Rhododendron simsii HOM05D005415 ORTHO05D006242 3.3e-51 207.6 724 26.0
SMO173G0041 Selaginella moellendorffii HOM05D005415 ORTHO05D006242 4.3e-51 207.2 175 60.0
Os04g0391000 Oryza sativa ssp. japonica HOM05D005415 ORTHO05D006242 1.3e-50 205.7 251 47.4
vmacro19135 Vaccinium macrocarpon HOM05D005415 ORTHO05D006242 1.6e-50 205.3 740 26.1
Sopen05g009520 Solanum pennellii HOM05D005415 ORTHO05D006242 3.1e-49 201.1 741 27.3
Nn4g22247 Nelumbo nucifera HOM05D005415 ORTHO05D006242 6.7e-44 183.3 599 29.5
CBR_g45436 Chara braunii HOM05D005415 ORTHO05D006242 2.8e-42 177.9 207 44.4
Ah.11g045540 Amaranthus hybridus HOM05D005415 ORTHO05D006242 2.0e-40 171.8 673 26.7
SHI31561 Sapria himalayana HOM05D005415 ORTHO05D006242 2.6e-40 171.4 197 50.8
Solyc05g014400.4 Solanum lycopersicum HOM05D005415 ORTHO05D006242 1.2e-37 162.5 577 27.2
Manes.06G122000 Manihot esculenta HOM05D005415 ORTHO05D006242 2.1e-37 161.8 577 27.9
CAN.G2034.2 Capsicum annuum HOM05D005415 ORTHO05D006242 3.5e-37 161.0 569 27.1
Cre17.g712450 Chlamydomonas reinhardtii HOM05D005415 ORTHO05D006242 2.0e-32 145.2 195 44.1
SHI10695 Sapria himalayana HOM05D005415 ORTHO05D006242 5.1e-28 130.6 192 43.2
MCO10G310 Micromonas commoda HOM05D005415 ORTHO05D006242 8.2e-26 123.2 233 36.9
Gohir.A07G049360 Gossypium hirsutum HOM05D005415 ORTHO05D006242 2.4e-25 121.7 182 35.7
TPR.G12965 Trifolium pratense HOM05D005415 ORTHO05D006242 1.4e-22 112.5 165 35.2
PSO302G0032 Papaver somniferum HOM05D005415 ORTHO05D006242 6.1e-21 107.1 225 34.2
PRCOL_00000625 Prasinoderma coloniale HOM05D005415 ORTHO05D006242 3.9e-20 104.4 140 43.6
Medtr1g057810 Medicago truncatula HOM05D000559 ORTHO05D000596 2.2e-18 98.6 172 36.0
Medtr1g105150 Medicago truncatula HOM05D000559 ORTHO05D000596 2.2e-18 98.6 172 36.0
TAR629G1046 Trochodendron aralioides HOM05D005415 ORTHO05D006242 2.2e-15 88.6 118 39.8
SEGI_12458 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 2.1e-13 82.0 93 43.0
PSO063G6924 Papaver somniferum HOM05D005415 ORTHO05D006242 1.8e-12 79.0 127 35.4
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 1.3e-10 72.8 126 35.7
CSS0026788 Camellia sinensis var. sinensis HOM05D005415 ORTHO05D006242 2.2e-10 72.0 87 46.0
SEGI_11582 Sequoiadendron giganteum HOM05D005415 ORTHO05D006242 2.2e-10 72.0 80 41.2
SHI10702 Sapria himalayana HOM05D005415 ORTHO05D006242 3.7e-10 71.2 160 28.8
SMO146G0246 Selaginella moellendorffii HOM05D025663 ORTHO05D006242 6.3e-10 70.5 115 40.0
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 1.4e-09 69.3 173 32.4
SMO146G0197 Selaginella moellendorffii HOM05D025663 ORTHO05D006242 1.8e-09 68.9 147 36.7
Medtr1g069480 Medicago truncatula HOM05D005415 ORTHO05D006242 3.1e-09 68.2 104 39.4
TAR381G1645 Trochodendron aralioides HOM05D005415 ORTHO05D006242 3.1e-09 68.2 59 59.3
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 4.1e-09 67.8 170 31.8
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 4.1e-09 67.8 169 33.1
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 9.1e-09 66.6 120 36.7
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 1.2e-08 66.2 122 32.8
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 1.2e-08 66.2 176 30.7
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 1.6e-08 65.9 182 30.8
Lsat_1_v5_gn_8_99581 Lactuca sativa HOM05D005415 ORTHO05D006242 2.0e-08 65.5 134 31.3
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 3.5e-08 64.7 198 27.3
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 3.5e-08 64.7 198 27.3
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 5.9e-08 63.9 122 32.0
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 7.7e-08 63.5 198 27.8
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 7.7e-08 63.5 128 33.6
SHI31560 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-08 63.5 86 38.4
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 7.7e-08 63.5 122 32.8
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 1.0e-07 63.2 122 31.1
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 1.0e-07 63.2 122 32.0
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.0e-07 63.2 198 27.8
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 1.3e-07 62.8 173 28.3
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 1.3e-07 62.8 122 35.2
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 1.7e-07 62.4 117 34.2
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 1.7e-07 62.4 125 32.8
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 2.2e-07 62.0 124 34.7
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 2.9e-07 61.6 117 30.8
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 3.8e-07 61.2 169 27.8
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 5.0e-07 60.8 117 32.5
Ca_05468_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 8.5e-07 60.1 123 33.3
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 8.5e-07 60.1 117 32.5
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 1.5e-06 59.3 122 32.8
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 1.5e-06 59.3 123 33.3
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 1.5e-06 59.3 123 34.1
SHI10696 Sapria himalayana HOM05D005415 ORTHO05D006242 1.9e-06 58.9 49 61.2
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 3.2e-06 58.2 130 33.8
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 3.2e-06 58.2 175 30.9
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 3.2e-06 58.2 123 30.9
Medtr1g069490 Medicago truncatula HOM05D000559 ORTHO05D000596 4.2e-06 57.8 57 50.9
Medtr1g071270 Medicago truncatula HOM05D005415 ORTHO05D006242 4.2e-06 57.8 93 40.9
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 5.5e-06 57.4 139 32.4
Cre16.g653000 Chlamydomonas reinhardtii HOM05D006752 ORTHO05D008597 7.2e-06 57.0 124 33.1
Lsat_1_v5_gn_4_20540 Lactuca sativa HOM05D005415 ORTHO05D006242 7.2e-06 57.0 48 54.2
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 7.2e-06 57.0 118 31.4
SMO173G0064 Selaginella moellendorffii HOM05D025663 ORTHO05D006242 9.4e-06 56.6 112 37.5
SMO173G0067 Selaginella moellendorffii HOM05D025663 ORTHO05D006242 9.4e-06 56.6 112 37.5


User provided reference genes

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