Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 5.6e-233 810.8 487 100.0
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 1.3e-40 171.8 166 57.8
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 3.8e-40 170.2 426 35.7
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 8.5e-40 169.1 173 54.9
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 9.4e-39 165.6 426 35.4
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 9.4e-39 165.6 426 35.2
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 6.7e-37 159.5 193 46.1
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 1.1e-36 158.7 425 35.1
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 1.5e-36 158.3 122 63.1
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 1.5e-36 158.3 134 59.0
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 2.0e-36 157.9 183 48.1
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 7.4e-36 156.0 179 50.8
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 7.4e-36 156.0 190 46.3
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 7.4e-36 156.0 198 46.5
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 7.4e-36 156.0 161 52.8
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 9.7e-36 155.6 131 58.0
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 1.3e-35 155.2 149 55.0
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 2.2e-35 154.5 151 53.0
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 2.8e-35 154.1 146 54.8
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 2.8e-35 154.1 135 57.8
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 3.7e-35 153.7 192 46.9
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 4.8e-35 153.3 189 46.6
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 6.3e-35 152.9 228 41.7
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 8.2e-35 152.5 130 58.5
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 8.2e-35 152.5 180 47.8
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 8.2e-35 152.5 193 47.7
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 8.2e-35 152.5 468 32.7
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 1.1e-34 152.1 130 58.5
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 1.1e-34 152.1 143 53.8
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 1.4e-34 151.8 193 47.2
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 1.4e-34 151.8 166 49.4
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 1.4e-34 151.8 161 49.7
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 1.4e-34 151.8 288 39.2
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 1.4e-34 151.8 165 49.1
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 1.8e-34 151.4 193 48.2
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.8e-34 151.4 193 47.2
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 2.4e-34 151.0 195 48.2
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 2.4e-34 151.0 137 56.2
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.4e-34 151.0 241 41.1
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 9.1e-34 149.1 146 54.1
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 9.1e-34 149.1 149 52.3
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 1.2e-33 148.7 148 53.4
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 1.2e-33 148.7 172 50.0
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 1.5e-33 148.3 191 47.6
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 1.5e-33 148.3 191 47.6
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 1.5e-33 148.3 225 42.7
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 2.0e-33 147.9 122 59.8
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 2.0e-33 147.9 150 53.3
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 2.6e-33 147.5 148 52.0
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 2.6e-33 147.5 464 31.9
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 2.6e-33 147.5 185 45.9
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 2.6e-33 147.5 120 59.2
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 2.6e-33 147.5 194 44.3
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 3.4e-33 147.1 202 44.6
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 5.9e-33 146.4 419 31.0
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 7.7e-33 146.0 120 57.5
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 1.0e-32 145.6 145 55.2
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 1.0e-32 145.6 145 55.2
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 1.0e-32 145.6 421 33.0
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 1.7e-32 144.8 455 31.6
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 1.7e-32 144.8 172 45.9
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 2.2e-32 144.4 432 30.8
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 2.2e-32 144.4 208 43.3
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 2.9e-32 144.1 410 30.5
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 2.9e-32 144.1 150 51.3
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.9e-32 144.1 403 34.5
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 2.9e-32 144.1 454 32.2
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 2.9e-32 144.1 198 45.5
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 5.0e-32 143.3 271 39.5
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 6.5e-32 142.9 459 30.3
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 8.5e-32 142.5 305 35.4
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 8.5e-32 142.5 315 35.9
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 8.5e-32 142.5 161 47.8
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 1.4e-31 141.7 182 44.5
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 1.9e-31 141.4 169 43.8
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 1.9e-31 141.4 155 49.0
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 2.5e-31 141.0 313 35.5
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 2.5e-31 141.0 308 34.7
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 3.2e-31 140.6 416 31.5
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 4.2e-31 140.2 414 32.1
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 5.5e-31 139.8 487 31.4
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 7.2e-31 139.4 434 33.2
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 9.4e-31 139.0 172 45.9
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.2e-30 138.7 309 34.6
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 2.7e-30 137.5 425 35.1
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 3.6e-30 137.1 452 31.0
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 3.6e-30 137.1 187 43.9
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 4.7e-30 136.7 169 46.2
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 4.7e-30 136.7 271 36.2
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 6.1e-30 136.3 177 45.8
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 6.1e-30 136.3 416 32.0
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 1.0e-29 135.6 167 44.9
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 3.9e-29 133.7 417 30.5
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 3.9e-29 133.7 449 29.0
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 6.7e-29 132.9 135 54.1
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 8.8e-29 132.5 190 43.2
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 2.0e-28 131.3 215 40.9
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 3.3e-28 130.6 409 29.8
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 4.4e-28 130.2 189 42.3
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 2.2e-27 127.9 419 29.1
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 4.8e-27 126.7 159 50.9
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 8.2e-27 125.9 292 34.6
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 8.2e-27 125.9 416 31.5
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 1.4e-26 125.2 416 31.0
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 2.4e-26 124.4 235 37.9
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 1.2e-25 122.1 164 46.3
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 1.0e-24 119.0 136 49.3
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 3.8e-24 117.1 180 41.1
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 5.0e-24 116.7 122 52.5
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 1.1e-23 115.5 148 46.6
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 7.2e-23 112.8 183 41.0
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 9.4e-23 112.5 120 50.8
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 1.2e-22 112.1 94 59.6
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 3.6e-22 110.5 542 27.3
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 4.7e-22 110.2 123 56.9
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 1.2e-20 105.5 378 29.9
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 5.3e-18 96.7 130 46.9
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 7.0e-18 96.3 105 46.7
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 9.1e-18 95.9 113 48.7
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.7e-17 94.4 225 32.9
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 1.1e-15 89.0 372 28.2
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 6.1e-14 83.2 123 42.3
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 8.0e-14 82.8 148 39.2
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 3.4e-12 77.4 463 24.6
MCO04G384 Micromonas commoda HOM05D006277 ORTHO05D007673 1.2e-09 68.9 124 35.5
Cre02.g105050 Chlamydomonas reinhardtii HOM05D006277 ORTHO05D007673 7.7e-09 66.2 131 35.9
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 3.3e-07 60.8 53 43.4


User provided reference genes

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