Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0140s0032 Marchantia polymorpha HOM05D005820 ORTHO05D007116 0.0e+00 1520.8 792 100.0
Pp3c16_7630 Physcomitrium patens HOM05D005820 ORTHO05D007116 7.4e-126 455.7 972 32.8
AagrBONN_evm.TU.Sc2ySwM_368.2608 Anthoceros agrestis HOM05D005820 ORTHO05D007116 8.2e-125 452.2 754 35.8
SMO203G0218 Selaginella moellendorffii HOM05D005820 ORTHO05D007116 2.2e-117 427.6 750 35.1
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 2.2e-109 401.0 809 34.2
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 4.2e-105 386.7 812 32.5
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 7.2e-105 386.0 796 33.3
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 2.7e-104 384.0 796 33.3
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 5.1e-103 379.8 822 33.2
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 4.4e-102 376.7 823 31.5
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 1.7e-101 374.8 854 32.7
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 4.8e-101 373.2 810 32.2
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 8.2e-101 372.5 808 31.8
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 1.4e-100 371.7 824 31.4
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 4.1e-100 370.2 823 32.1
ATR0829G080 Amborella trichopoda HOM05D005820 ORTHO05D007116 4.5e-99 366.7 727 32.5
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 2.9e-98 364.0 810 31.2
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 3.8e-98 363.6 801 30.5
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 8.5e-98 362.5 809 31.3
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 1.4e-97 361.7 808 31.3
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 1.4e-97 361.7 807 31.2
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 3.2e-97 360.5 810 30.2
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 7.2e-97 359.4 802 31.0
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.2e-96 358.6 801 30.2
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 1.6e-96 358.2 811 30.1
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 2.7e-96 357.5 818 30.9
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 1.4e-95 355.1 824 29.9
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.4e-95 355.1 737 31.1
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 1.8e-95 354.8 814 30.2
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 5.2e-95 353.2 815 30.6
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 1.1e-94 352.1 705 32.2
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 7.0e-92 342.8 836 31.0
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 2.0e-91 341.3 805 29.7
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 3.5e-91 340.5 811 29.6
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 7.7e-91 339.3 839 29.4
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 2.9e-90 337.4 818 30.4
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 2.9e-90 337.4 811 29.2
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 3.8e-90 337.0 785 29.3
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 5.0e-90 336.7 810 32.2
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 6.5e-90 336.3 810 29.4
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 1.1e-89 335.5 707 32.1
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 3.2e-89 334.0 816 29.3
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 3.2e-89 334.0 853 29.9
Peaxi162Scf00046g02624 Petunia axillaris HOM05D005820 ORTHO05D007116 3.2e-89 334.0 806 29.3
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 5.5e-89 333.2 806 29.5
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 7.2e-89 332.8 802 30.3
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 9.4e-89 332.4 806 29.2
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 2.1e-88 331.3 807 28.5
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 2.1e-88 331.3 715 30.3
HPP92_000954 Vanilla planifolia HOM05D005820 ORTHO05D007116 2.1e-88 331.3 813 29.9
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 4.0e-87 327.0 802 29.9
RcHm_v2.0_Chr1g0384611 Rosa chinensis HOM05D005820 ORTHO05D007116 4.0e-87 327.0 821 29.7
Lsat_1_v5_gn_9_46201 Lactuca sativa HOM05D005820 ORTHO05D007116 6.7e-87 326.2 804 30.2
MSTRG.19155 Avicennia marina HOM05D005820 ORTHO05D007116 1.2e-86 325.5 799 28.8
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 1.5e-86 325.1 811 29.8
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 3.3e-86 323.9 793 29.8
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 5.7e-86 323.2 814 28.1
FAN01G2368 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.2e-85 321.2 810 29.4
Os10g0402200 Oryza sativa ssp. japonica HOM05D005820 ORTHO05D007116 2.8e-85 320.9 738 29.4
CBR_g52284 Chara braunii HOM05D005820 ORTHO05D007116 3.7e-85 320.5 977 27.6
FvH4_7g34260 Fragaria vesca HOM05D005820 ORTHO05D007116 4.8e-85 320.1 809 29.2
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 3.1e-84 317.4 705 29.9
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 5.3e-84 316.6 746 30.2
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 5.3e-84 316.6 807 29.2
TPR.G19809 Trifolium pratense HOM05D005820 ORTHO05D007116 7.0e-84 316.2 729 30.0
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 4.5e-83 313.5 679 32.3
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 5.9e-83 313.2 708 31.1
Prupe.2G329300 Prunus persica HOM05D005820 ORTHO05D007116 7.7e-83 312.8 786 29.6
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 1.3e-82 312.0 798 29.4
FAN03G2216 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.9e-82 310.8 818 29.0
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 4.2e-81 307.0 673 31.4
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 9.4e-81 305.8 816 28.1
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.2e-80 305.4 724 29.4
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 2.7e-80 304.3 724 29.1
Eucgr.A02992 Eucalyptus grandis HOM05D005820 ORTHO05D007116 3.6e-80 303.9 811 27.9
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 1.4e-79 302.0 790 30.0
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 1.4e-79 302.0 787 27.8
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 4.8e-77 293.5 836 28.2
Migut.J00550 Erythranthe guttata HOM05D005820 ORTHO05D007116 1.2e-75 288.9 811 30.6
SGA_v2.0_scaffold75G24867 Striga asiatica HOM05D005820 ORTHO05D007116 7.7e-75 286.2 790 27.2
FAN10G1332 Fragaria x ananassa HOM05D005820 ORTHO05D007116 2.9e-74 284.3 691 29.7
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 2.9e-74 284.3 687 29.4
Rhsim03G0224500 Rhododendron simsii HOM05D005820 ORTHO05D007116 6.5e-74 283.1 787 27.7
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 4.7e-72 276.9 787 28.1
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 2.9e-66 257.7 444 36.3
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 2.2e-61 241.5 654 29.2
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 4.1e-60 237.3 519 30.3
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 5.0e-58 230.3 538 29.9
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 6.2e-56 223.4 524 29.6
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 1.5e-54 218.8 563 28.4
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 9.8e-54 216.1 515 30.3
CAN.G103.20 Capsicum annuum HOM05D005820 ORTHO05D007116 2.4e-52 211.5 556 28.1
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 3.2e-52 211.1 462 30.3
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 1.2e-51 209.1 691 24.6
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 2.1e-51 208.4 363 35.0
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 1.2e-48 199.1 351 35.9
Ca_03104_v3 Cicer arietinum L. HOM05D005820 ORTHO05D007116 6.8e-47 193.4 427 31.6
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 2.0e-46 191.8 341 34.6
AUR62042764 Chenopodium quinoa HOM05D005820 ORTHO05D007116 7.5e-46 189.9 648 25.8
PGSC0003DMG402015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 1.1e-44 186.0 353 33.4
SHI15005 Sapria himalayana HOM05D005820 ORTHO05D007116 6.0e-43 180.3 293 36.2
Hma1.2p1_0419F.1_g149500 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 2.5e-41 174.9 264 37.5
SalBow3G3950 Salvia bowleyana HOM05D005820 ORTHO05D007116 1.6e-40 172.2 532 25.9
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 2.8e-40 171.4 369 30.9
PGSC0003DMG401015362 Solanum tuberosum HOM05D005820 ORTHO05D007116 3.0e-34 151.4 389 27.2
arahy.Tifrunner.gnm1.ann1.86ZX86 Arachis hypogaea HOM05D005820 ORTHO05D007116 5.6e-33 147.1 511 26.0
Ciclev10032799m.g Citrus clementina HOM05D005820 ORTHO05D007116 8.1e-32 143.3 212 36.3
SEGI_39455 Sequoiadendron giganteum HOM05D005820 ORTHO05D007116 1.7e-29 135.6 168 43.5
Cpa.g.sc43.143 Carica papaya HOM05D005820 ORTHO05D007116 1.7e-26 125.6 222 34.2
Oeu046340.1 Olea europaea HOM05D005820 ORTHO05D007116 3.0e-26 124.8 197 35.5
Lalb_Chr01g0000771 Lupinus albus HOM05D005820 ORTHO05D007116 8.7e-26 123.2 199 35.2
CAN.G824.56 Capsicum annuum HOM05D005820 ORTHO05D007116 1.9e-25 122.1 197 35.5
MD01G1239300 Malus domestica HOM05D005820 ORTHO05D007116 1.8e-23 115.5 428 25.2
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 2.0e-22 112.1 257 30.4
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 7.6e-22 110.2 255 29.8
arahy.Tifrunner.gnm1.ann1.9KL91U Arachis hypogaea HOM05D005820 ORTHO05D007116 1.3e-21 109.4 198 31.8
Nitab4.5_0010710g0040 Nicotiana tabacum HOM05D005820 ORTHO05D007116 9.3e-20 103.2 173 37.0
arahy.Tifrunner.gnm1.ann1.CH4JFK Arachis hypogaea HOM05D005820 ORTHO05D007116 1.0e-18 99.8 176 33.0
Oeu001352.2 Olea europaea HOM05D005820 ORTHO05D007116 7.4e-17 93.6 257 26.8
Hma1.2p1_0419F.1_g149520 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 9.0e-15 86.7 87 42.5
AUR62022348 Chenopodium quinoa HOM05D005820 ORTHO05D007116 3.8e-13 81.3 102 37.3
Lj3A884T57 Lonicera japonica HOM05D005820 ORTHO05D007116 3.8e-13 81.3 274 27.0
MCO08G313 Micromonas commoda HOM05D005820 ORTHO05D007116 1.9e-09 68.9 129 29.5
CAN.G557.3 Capsicum annuum HOM05D005820 ORTHO05D007116 2.1e-08 65.5 142 31.7
Cfa022750 Carpinus fangiana HOM05D005820 ORTHO05D007116 2.4e-07 62.0 480 21.5


User provided reference genes

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