Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0139s0021 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.6e-105 386.0 181 100.0
Mapoly0037s0147 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.5e-45 186.0 107 78.5
Mapoly0037s0148 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.5e-45 186.0 107 78.5
Mapoly0203s0003 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.2e-44 183.7 107 78.5
Mapoly0203s0004 Marchantia polymorpha HOM05D000066 ORTHO05D000055 8.9e-43 177.6 103 77.7
Mapoly0203s0005 Marchantia polymorpha HOM05D000066 ORTHO05D000055 9.5e-37 157.5 131 56.5
Mapoly0203s0006 Marchantia polymorpha HOM05D000066 ORTHO05D000055 6.4e-33 144.8 128 54.7
Mapoly0203s0007 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.7e-31 139.4 128 51.6
Mapoly0203s0008 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.3e-30 137.1 128 50.8
Mapoly0072s0065 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.5e-26 123.6 103 56.3
Mapoly0132s0043 Marchantia polymorpha HOM05D000066 ORTHO05D000055 3.1e-19 99.4 85 52.9
Mapoly0149s0003 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.6e-15 87.0 123 43.9
Mapoly0149s0002 Marchantia polymorpha HOM05D000066 ORTHO05D000055 3.5e-15 85.9 123 43.9
Mapoly0089s0005 Marchantia polymorpha HOM05D000066 ORTHO05D000055 6.0e-15 85.1 123 43.1
Mapoly1415s0001 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.3e-14 84.0 121 43.0
Mapoly0071s0084 Marchantia polymorpha HOM05D000066 ORTHO05D000055 3.9e-14 82.4 126 41.3
Mapoly0223s0003 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.9e-13 80.1 128 40.6
Mapoly0066s0023 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.5e-13 79.7 122 37.7
Mapoly0071s0082 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.1e-11 74.3 123 35.8
Mapoly0117s0020 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.4e-11 73.2 88 44.3
Mapoly0066s0075 Marchantia polymorpha HOM05D000066 ORTHO05D000055 8.9e-11 71.2 128 38.3
Mapoly0071s0083 Marchantia polymorpha HOM05D000066 ORTHO05D000055 4.4e-10 68.9 125 35.2
PGSC0003DMG400024060 Solanum tuberosum HOM05D000066 ORTHO05D000055 9.9e-10 67.8 100 34.0
Actinidia30498 Actinidia chinensis HOM05D000066 ORTHO05D000055 2.2e-09 66.6 97 29.9
Mapoly0066s0076 Marchantia polymorpha HOM05D000066 ORTHO05D000055 3.8e-09 65.9 86 39.5
Cc01_g16870 Coffea canephora HOM05D000066 ORTHO05D000055 6.4e-09 65.1 123 30.1
Hund01199 Selenicereus undatus HOM05D000066 ORTHO05D000055 6.4e-09 65.1 84 34.5
Mapoly0071s0085 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.4e-08 63.2 131 34.4
SMO364G0455 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 2.4e-08 63.2 100 35.0
Mapoly0066s0074 Marchantia polymorpha HOM05D000066 ORTHO05D000055 3.2e-08 62.8 128 34.4
BolC9t53226H Brassica oleracea HOM05D000066 ORTHO05D000055 4.2e-08 62.4 97 32.0
Mapoly0094s0049 Marchantia polymorpha HOM05D000066 ORTHO05D000055 4.2e-08 62.4 84 32.1
Ah.01g005150 Amaranthus hybridus HOM05D000066 ORTHO05D000055 5.4e-08 62.0 101 29.7
BcaC04g23953 Brassica carinata HOM05D000066 ORTHO05D000055 5.4e-08 62.0 97 32.0
BcaC04g23991 Brassica carinata HOM05D000066 ORTHO05D000055 5.4e-08 62.0 97 32.0
C09p02980 Brassica napus HOM05D000066 ORTHO05D000055 5.4e-08 62.0 97 32.0
CAN.G624.14 Capsicum annuum HOM05D000066 ORTHO05D000055 5.4e-08 62.0 105 30.5
Nitab4.5_0002113g0020 Nicotiana tabacum HOM05D000066 ORTHO05D000055 5.4e-08 62.0 105 31.4
SMO228G0189 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 5.4e-08 62.0 100 32.0
A09p02500 Brassica napus HOM05D000066 ORTHO05D000055 7.1e-08 61.6 97 33.0
BraA03t12235Z Brassica rapa HOM05D000066 ORTHO05D000055 7.1e-08 61.6 97 32.0
BraA09t35897Z Brassica rapa HOM05D000066 ORTHO05D000055 7.1e-08 61.6 97 32.0
Lj4g0017744 Lotus japonicus HOM05D000066 ORTHO05D000055 7.1e-08 61.6 117 28.2
MBI02_g10105_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D000055 9.3e-08 61.2 98 30.6
Mapoly0040s0062 Marchantia polymorpha HOM05D000066 ORTHO05D000055 9.3e-08 61.2 83 32.5
BcaC01g06697 Brassica carinata HOM05D000066 ORTHO05D000055 1.2e-07 60.8 97 32.0
A03p30550 Brassica napus HOM05D000066 ORTHO05D000055 1.2e-07 60.8 97 32.0
C03p37070 Brassica napus HOM05D000066 ORTHO05D000055 1.2e-07 60.8 97 32.0
BolC3t16005H Brassica oleracea HOM05D000066 ORTHO05D000055 1.2e-07 60.8 97 32.0
Pp3c16_21040 Physcomitrium patens HOM05D000066 ORTHO05D000055 1.2e-07 60.8 83 33.7
SalBow7G0656 Salvia bowleyana HOM05D000066 ORTHO05D000055 1.2e-07 60.8 100 30.0
CsaV3_1G017270 Cucumis sativus L. HOM05D000066 ORTHO05D000055 1.6e-07 60.5 98 28.6
Pp3c6_490 Physcomitrium patens HOM05D000066 ORTHO05D000055 1.6e-07 60.5 83 33.7
Aqoxy4G01888 Aquilegia oxysepala HOM05D000066 ORTHO05D000055 2.1e-07 60.1 80 35.0
BcaB01g01971 Brassica carinata HOM05D000066 ORTHO05D000055 2.1e-07 60.1 97 30.9
CARHR251660 Cardamine hirsuta HOM05D000066 ORTHO05D000055 2.1e-07 60.1 97 32.0
Dinv10893 Davidia involucrata HOM05D000066 ORTHO05D000055 2.1e-07 60.1 89 34.8
Mapoly0072s0046 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.1e-07 60.1 85 30.6
Mapoly0149s0004 Marchantia polymorpha HOM05D000066 ORTHO05D000055 2.1e-07 60.1 102 38.2
Potri.018G084300 Populus trichocarpa HOM05D000066 ORTHO05D000055 2.1e-07 60.1 81 34.6
Sabra19G0123300 Salix brachista HOM05D000066 ORTHO05D000055 2.1e-07 60.1 87 32.2
PGSC0003DMG400002188 Solanum tuberosum HOM05D000066 ORTHO05D000055 2.1e-07 60.1 100 35.0
Sabra19G0131300 Salix brachista HOM05D000066 ORTHO05D000055 2.7e-07 59.7 87 32.2
Pp3c16_20960 Physcomitrium patens HOM05D000066 ORTHO05D000055 3.5e-07 59.3 125 28.8
Sabra13G0122500 Salix brachista HOM05D000066 ORTHO05D000055 3.5e-07 59.3 86 32.6
HanXRQChr15g0479351 Helianthus annuus HOM05D000066 ORTHO05D000055 4.6e-07 58.9 80 32.5
SGA_v2.0_scaffold34G13891 Striga asiatica HOM05D000066 ORTHO05D000055 4.6e-07 58.9 98 28.6
GSVIVG01000416001 Vitis vinifera HOM05D000066 ORTHO05D000055 4.6e-07 58.9 83 36.1
Dinv18558 Davidia involucrata HOM05D000066 ORTHO05D000055 6.0e-07 58.5 100 31.0
Thhalv10025941m.g Eutrema salsugineum HOM05D000066 ORTHO05D000055 6.0e-07 58.5 102 31.4
HanXRQChr17g0543231 Helianthus annuus HOM05D000066 ORTHO05D000055 6.0e-07 58.5 80 33.8
Nitab4.5_0000396g0010 Nicotiana tabacum HOM05D000066 ORTHO05D000055 6.0e-07 58.5 97 28.9
Sp7g28150 Schrenkiella parvula HOM05D000066 ORTHO05D000055 6.0e-07 58.5 102 31.4
SGA_v2.0_scaffold6G03228 Striga asiatica HOM05D000066 ORTHO05D000055 6.0e-07 58.5 117 29.1
TWI18G0782 Tripterygium wilfordii HOM05D000066 ORTHO05D000055 6.0e-07 58.5 87 33.3
arahy.Tifrunner.gnm1.ann1.4KDK0P Arachis hypogaea HOM05D000066 ORTHO05D000055 7.8e-07 58.2 90 32.2
arahy.Tifrunner.gnm1.ann1.6NV05N Arachis hypogaea HOM05D000066 ORTHO05D000055 7.8e-07 58.2 90 32.2
BcaB01g02513 Brassica carinata HOM05D000066 ORTHO05D000055 7.8e-07 58.2 97 33.0
Ciclev10016129m.g Citrus clementina HOM05D000066 ORTHO05D000055 7.8e-07 58.2 84 31.0
Nitab4.5_0003353g0040 Nicotiana tabacum HOM05D000066 ORTHO05D000055 7.8e-07 58.2 97 28.9
Zm00001eb382500 Zea mays HOM05D000066 ORTHO05D000055 7.8e-07 58.2 101 31.7
MSTRG.14838 Avicennia marina HOM05D000066 ORTHO05D000055 1.0e-06 57.8 80 31.2
Cc04_g08710 Coffea canephora HOM05D000066 ORTHO05D000055 1.0e-06 57.8 97 29.9
DCAR_025835 Daucus carota HOM05D000066 ORTHO05D000055 1.0e-06 57.8 97 28.9
Migut.N00624 Erythranthe guttata HOM05D000066 ORTHO05D000055 1.0e-06 57.8 83 32.5
Mapoly0094s0050 Marchantia polymorpha HOM05D000066 ORTHO05D000055 1.0e-06 57.8 84 29.8
Nitab4.5_0005286g0100 Nicotiana tabacum HOM05D000066 ORTHO05D000055 1.0e-06 57.8 100 31.0
Potri.019G125000 Populus trichocarpa HOM05D000066 ORTHO05D000055 1.0e-06 57.8 87 32.2
PGR142G3998 Punica granatum HOM05D000066 ORTHO05D000055 1.0e-06 57.8 86 32.6
Sp6g03250 Schrenkiella parvula HOM05D000066 ORTHO05D000055 1.0e-06 57.8 97 32.0
Sed0011148 Sechium edule HOM05D000066 ORTHO05D000055 1.0e-06 57.8 103 28.2
SEGI_09102 Sequoiadendron giganteum HOM05D000066 ORTHO05D000055 1.0e-06 57.8 97 28.9
BcaC09g51811 Brassica carinata HOM05D000066 ORTHO05D000055 1.3e-06 57.4 102 32.4
C01p08780 Brassica napus HOM05D000066 ORTHO05D000055 1.3e-06 57.4 102 33.3
Carub.0006s3384 Capsella rubella HOM05D000066 ORTHO05D000055 1.3e-06 57.4 97 32.0
Pp3c25_10760 Physcomitrium patens HOM05D000066 ORTHO05D000055 1.3e-06 57.4 84 34.5
SalBow5G2295 Salvia bowleyana HOM05D000066 ORTHO05D000055 1.3e-06 57.4 97 29.9
SalBow5G2837 Salvia bowleyana HOM05D000066 ORTHO05D000055 1.3e-06 57.4 97 29.9
SEGI_10391 Sequoiadendron giganteum HOM05D000066 ORTHO05D000055 1.3e-06 57.4 99 29.3
TWI75G0306 Tripterygium wilfordii HOM05D000066 ORTHO05D000055 1.3e-06 57.4 87 34.5
AT4G03210 Arabidopsis thaliana HOM05D000066 ORTHO05D000055 1.7e-06 57.0 97 32.0
BcaNung03002 Brassica carinata HOM05D000066 ORTHO05D000055 1.7e-06 57.0 102 32.4
A01p07870 Brassica napus HOM05D000066 ORTHO05D000055 1.7e-06 57.0 102 32.4
BolC1t00868H Brassica oleracea HOM05D000066 ORTHO05D000055 1.7e-06 57.0 102 32.4
BraA01t00732Z Brassica rapa HOM05D000066 ORTHO05D000055 1.7e-06 57.0 102 32.4
MELO3C021686.2 Cucumis melo HOM05D000066 ORTHO05D000055 1.7e-06 57.0 97 27.8
Migut.H00313 Erythranthe guttata HOM05D000066 ORTHO05D000055 1.7e-06 57.0 97 28.9
Eucgr.H00619 Eucalyptus grandis HOM05D000066 ORTHO05D000055 1.7e-06 57.0 97 29.9
Glyma.13G304400 Glycine max HOM05D000066 ORTHO05D000055 1.7e-06 57.0 86 31.4
Hma1.2p1_0712F.1_g207540 Hydrangea macrophylla HOM05D000066 ORTHO05D000055 1.7e-06 57.0 83 33.7
Hma1.2p1_2154F.1_g315270 Hydrangea macrophylla HOM05D000066 ORTHO05D000055 1.7e-06 57.0 97 26.8
Nn3g21428 Nelumbo nucifera HOM05D000066 ORTHO05D000055 1.7e-06 57.0 100 32.0
Phvul.003G231900 Phaseolus vulgaris HOM05D000066 ORTHO05D000055 1.7e-06 57.0 97 28.9
PGSC0003DMG400026189 Solanum tuberosum HOM05D000066 ORTHO05D000055 1.7e-06 57.0 100 29.0
TWI63G0948 Tripterygium wilfordii HOM05D000066 ORTHO05D000055 1.7e-06 57.0 106 34.0
unitig_699.g19609 Utricularia gibba HOM05D000066 ORTHO05D000055 1.7e-06 57.0 102 29.4
AL6G49720 Arabidopsis lyrata HOM05D000066 ORTHO05D000055 2.3e-06 56.6 97 32.0
Dinv23064 Davidia involucrata HOM05D000066 ORTHO05D000055 2.3e-06 56.6 97 28.9
HanXRQChr15g0475521 Helianthus annuus HOM05D000066 ORTHO05D000055 2.3e-06 56.6 97 25.8
Lsat_1_v5_gn_3_43161 Lactuca sativa HOM05D000066 ORTHO05D000055 2.3e-06 56.6 80 32.5
Lj3g0001866 Lotus japonicus HOM05D000066 ORTHO05D000055 2.3e-06 56.6 84 29.8
Nitab4.5_0003353g0030 Nicotiana tabacum HOM05D000066 ORTHO05D000055 2.3e-06 56.6 97 27.8
PSO063G1251 Papaver somniferum HOM05D000066 ORTHO05D000055 2.3e-06 56.6 122 27.9
Pp3c25_10500 Physcomitrium patens HOM05D000066 ORTHO05D000055 2.3e-06 56.6 125 27.2
SMO275G0018 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 2.3e-06 56.6 99 29.3
TAR271G0002 Trochodendron aralioides HOM05D000066 ORTHO05D000055 2.3e-06 56.6 80 30.0
DCAR_019205 Daucus carota HOM05D000066 ORTHO05D000055 3.0e-06 56.2 87 32.2
Gohir.A11G049200 Gossypium hirsutum HOM05D000066 ORTHO05D000055 3.0e-06 56.2 97 27.8
Gohir.D11G052800 Gossypium hirsutum HOM05D000066 ORTHO05D000055 3.0e-06 56.2 97 28.9
Gorai.007G057400 Gossypium raimondii HOM05D000066 ORTHO05D000055 3.0e-06 56.2 97 28.9
Lsat_1_v5_gn_4_159341 Lactuca sativa HOM05D000066 ORTHO05D000055 3.0e-06 56.2 97 27.8
Lalb_Chr14g0375571 Lupinus albus HOM05D000066 ORTHO05D000055 3.0e-06 56.2 86 31.4
SMO203G0106 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 3.0e-06 56.2 98 30.6
Sc08g0007730 Simmondsia chinensis HOM05D000066 ORTHO05D000055 3.0e-06 56.2 84 32.1
Sc14g0009290 Simmondsia chinensis HOM05D000066 ORTHO05D000055 3.0e-06 56.2 105 29.5
ECA246G1718 Erigeron canadensis HOM05D000066 ORTHO05D000055 3.9e-06 55.8 80 32.5
FAN26G0997 Fragaria x ananassa HOM05D000066 ORTHO05D000055 3.9e-06 55.8 97 25.8
MBI02_g35317_MAGBIO Magnolia biondii HOM05D000066 ORTHO05D000055 3.9e-06 55.8 85 31.8
Nitab4.5_0005793g0020 Nicotiana tabacum HOM05D000066 ORTHO05D000055 3.9e-06 55.8 80 36.2
Phvul.005G111300 Phaseolus vulgaris HOM05D000066 ORTHO05D000055 3.9e-06 55.8 86 31.4
SMO147G0167 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 3.9e-06 55.8 99 30.3
SMO147G0390 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 3.9e-06 55.8 99 30.3
Sc12g0002520 Simmondsia chinensis HOM05D000066 ORTHO05D000055 3.9e-06 55.8 86 32.6
MSTRG.6542 Avicennia marina HOM05D000066 ORTHO05D000055 5.1e-06 55.5 83 32.5
CAN.G1061.3 Capsicum annuum HOM05D000066 ORTHO05D000055 5.1e-06 55.5 97 28.9
CiPaw.06G111700 Carya illinoinensis HOM05D000066 ORTHO05D000055 5.1e-06 55.5 100 29.0
DCAR_021201 Daucus carota HOM05D000066 ORTHO05D000055 5.1e-06 55.5 83 34.9
Sabra07G0006600 Salix brachista HOM05D000066 ORTHO05D000055 5.1e-06 55.5 98 30.6
SMO147G0344 Selaginella moellendorffii HOM05D000066 ORTHO05D000055 5.1e-06 55.5 99 29.3
THA.LOC104801200 Tarenaya hassleriana HOM05D000066 ORTHO05D000055 5.1e-06 55.5 97 30.9
TAR628G0542 Trochodendron aralioides HOM05D000066 ORTHO05D000055 5.1e-06 55.5 97 26.8
VMungo0540G1764 Vigna mungo HOM05D000066 ORTHO05D000055 5.1e-06 55.5 85 30.6
Atru.chr6.3109 Acer truncatum HOM05D000066 ORTHO05D000055 6.6e-06 55.1 84 31.0
Cfa014477 Carpinus fangiana HOM05D000066 ORTHO05D000055 6.6e-06 55.1 86 30.2
Eucgr.C00182 Eucalyptus grandis HOM05D000066 ORTHO05D000055 6.6e-06 55.1 104 31.7
Glyma.12G197600 Glycine max HOM05D000066 ORTHO05D000055 6.6e-06 55.1 91 29.7
Gohir.A02G148400 Gossypium hirsutum HOM05D000066 ORTHO05D000055 6.6e-06 55.1 97 26.8
Gohir.D03G032100 Gossypium hirsutum HOM05D000066 ORTHO05D000055 6.6e-06 55.1 97 26.8
Gorai.003G033600 Gossypium raimondii HOM05D000066 ORTHO05D000055 6.6e-06 55.1 97 26.8
Peaxi162Scf00082g02211 Petunia axillaris HOM05D000066 ORTHO05D000055 6.6e-06 55.1 80 32.5
Sed0010364 Sechium edule HOM05D000066 ORTHO05D000055 6.6e-06 55.1 103 29.1
Thecc.01G079000 Theobroma cacao HOM05D000066 ORTHO05D000055 6.6e-06 55.1 97 26.8
VMungo0251G0755 Vigna mungo HOM05D000066 ORTHO05D000055 6.6e-06 55.1 81 33.3
VMungo1080G0502 Vigna mungo HOM05D000066 ORTHO05D000055 6.6e-06 55.1 86 30.2
BcaC01g01160 Brassica carinata HOM05D000066 ORTHO05D000055 8.7e-06 54.7 102 29.4
BolC9t59159H Brassica oleracea HOM05D000066 ORTHO05D000055 8.7e-06 54.7 105 27.6
Carub.0003s2731 Capsella rubella HOM05D000066 ORTHO05D000055 8.7e-06 54.7 105 30.5
COL.COLO4_13039 Corchorus olitorius HOM05D000066 ORTHO05D000055 8.7e-06 54.7 100 28.0
Dinv42737 Davidia involucrata HOM05D000066 ORTHO05D000055 8.7e-06 54.7 97 28.9
Dinv43364 Davidia involucrata HOM05D000066 ORTHO05D000055 8.7e-06 54.7 97 28.9
ECA246G5270 Erigeron canadensis HOM05D000066 ORTHO05D000055 8.7e-06 54.7 97 25.8
Nitab4.5_0002347g0150 Nicotiana tabacum HOM05D000066 ORTHO05D000055 8.7e-06 54.7 80 33.8
Pp3c6_520 Physcomitrium patens HOM05D000066 ORTHO05D313660 8.7e-06 54.7 83 28.9
RcHm_v2.0_Chr2g0160611 Rosa chinensis HOM05D000066 ORTHO05D000055 8.7e-06 54.7 86 31.4
Solyc02g091920.3 Solanum lycopersicum HOM05D000066 ORTHO05D000055 8.7e-06 54.7 97 27.8
Sopen02g036490 Solanum pennellii HOM05D000066 ORTHO05D000055 8.7e-06 54.7 97 27.8


User provided reference genes

Program Settings