Gene: Pp3c16_20960

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c16_20960
  • Transcript Identifier Pp3c16_20960V3.2
  • Gene Type Coding gene
  • Location Chr16 : 12888345-12889997 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c16_20960V3.2
  • pacid 32985922
  • alias Phypa_112531
  • alias Phpat.016G085600
  • alias Pp1s4_32V6
  • uniprot A0A2K1J9I2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G65730
GO:0042545
ISO
PLAZA Integrative Orthologycell wall modification AT2G18800
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT4G03210
GO:0009834
ISO
PLAZA Integrative Orthologyplant-type secondary cell wall biogenesis AT4G03210
GO:0030243
ISO
PLAZA Integrative Orthologycellulose metabolic process AT3G25050
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT2G18800
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT3G25050
GO:0010411
IEA
GOA Databasexyloglucan metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0006073
IEA
GOA Databasecellular glucan metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0042546
IEA
GOA Databasecell wall biogenesis
GO:0042546
IEA
InterProcell wall biogenesis
GO:0008152
IEA
GOA Databasemetabolic process
GO:0071555
IEA
GOA Databasecell wall organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016740
IEA
GOA Databasetransferase activity
GO:0033946
ISO
PLAZA Integrative Orthologyxyloglucan-specific endo-beta-1,4-glucanase activity AT5G57540
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0016762
IEA
GOA Databasexyloglucan:xyloglucosyl transferase activity
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000757 Glycoside hydrolase family 16
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 Beta-glucanase/XTH
IPR016455 Xyloglucan endotransglucosylase/hydrolase
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase