Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 8.9e-194 680.2 385 100.0
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 2.7e-33 147.1 173 50.3
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 7.7e-28 129.0 202 40.1
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 1.0e-27 128.6 188 38.8
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.9e-27 127.1 173 43.9
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 5.0e-27 126.3 220 38.2
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 5.0e-27 126.3 198 37.4
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.1e-26 125.2 224 34.8
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.1e-26 125.2 205 38.5
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 1.4e-26 124.8 226 35.0
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 1.4e-26 124.8 232 35.3
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.9e-26 124.4 224 34.8
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 4.2e-26 123.2 198 43.9
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 4.2e-26 123.2 230 37.4
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 7.2e-26 122.5 222 37.8
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 1.6e-25 121.3 222 36.5
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 1.6e-25 121.3 228 37.3
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 2.1e-25 120.9 225 36.0
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 2.1e-25 120.9 230 34.3
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 2.7e-25 120.6 226 39.4
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 3.6e-25 120.2 228 39.9
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 3.6e-25 120.2 224 34.4
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 4.7e-25 119.8 208 41.8
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 4.7e-25 119.8 226 40.3
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 8.0e-25 119.0 191 40.8
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 8.0e-25 119.0 198 35.9
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.0e-24 118.6 224 40.6
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.4e-24 118.2 202 37.1
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 1.8e-24 117.9 237 34.6
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 1.8e-24 117.9 198 36.4
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 2.3e-24 117.5 224 33.0
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 3.0e-24 117.1 224 33.0
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.0e-24 117.1 226 39.8
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 3.9e-24 116.7 221 38.9
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 3.9e-24 116.7 226 31.0
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 3.9e-24 116.7 202 35.6
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 3.9e-24 116.7 198 41.4
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 6.7e-24 115.9 225 36.9
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 6.7e-24 115.9 224 32.1
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 6.7e-24 115.9 224 32.6
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 6.7e-24 115.9 227 37.0
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 8.8e-24 115.5 231 33.8
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 1.1e-23 115.2 228 33.8
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 1.1e-23 115.2 178 39.3
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 1.5e-23 114.8 182 37.9
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 1.5e-23 114.8 203 36.0
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 1.5e-23 114.8 260 31.5
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 2.6e-23 114.0 233 34.8
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 3.3e-23 113.6 234 34.6
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 3.3e-23 113.6 215 33.5
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 3.3e-23 113.6 209 35.9
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 4.4e-23 113.2 217 41.5
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 4.4e-23 113.2 221 37.6
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 5.7e-23 112.8 203 36.0
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 7.4e-23 112.5 203 41.9
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 9.7e-23 112.1 234 34.2
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 1.7e-22 111.3 195 35.4
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 1.7e-22 111.3 220 34.1
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 1.7e-22 111.3 203 40.9
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 2.2e-22 110.9 222 34.2
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 2.2e-22 110.9 228 39.0
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 2.8e-22 110.5 196 36.2
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.8e-22 110.5 196 35.7
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 2.8e-22 110.5 234 34.2
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 3.7e-22 110.2 234 31.6
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 4.8e-22 109.8 224 33.5
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 4.8e-22 109.8 229 32.3
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 6.3e-22 109.4 223 39.0
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 6.3e-22 109.4 163 39.3
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 8.2e-22 109.0 204 34.8
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.4e-21 108.2 223 35.9
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 1.4e-21 108.2 198 39.9
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 1.8e-21 107.8 194 38.7
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 2.4e-21 107.5 235 33.2
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 2.4e-21 107.5 164 36.6
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 3.1e-21 107.1 237 35.9
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 3.1e-21 107.1 236 32.2
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 3.1e-21 107.1 231 35.5
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 5.3e-21 106.3 210 39.5
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 7.0e-21 105.9 236 31.8
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 7.0e-21 105.9 174 36.2
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 9.1e-21 105.5 236 31.8
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.2e-20 105.1 217 34.6
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 1.6e-20 104.8 230 37.8
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 2.0e-20 104.4 223 39.0
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 3.5e-20 103.6 215 35.3
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 3.5e-20 103.6 203 34.0
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 5.9e-20 102.8 229 30.6
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 2.9e-19 100.5 92 59.8
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 6.5e-19 99.4 203 41.9
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 1.5e-18 98.2 181 42.5
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 1.9e-18 97.8 221 29.4
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 5.5e-18 96.3 208 34.6
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 5.5e-18 96.3 207 39.1
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 7.2e-18 95.9 203 33.0
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 6.1e-17 92.8 262 29.8
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 5.2e-16 89.7 278 28.1
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 6.7e-16 89.4 209 31.1
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 3.3e-15 87.0 216 31.9
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 5.7e-15 86.3 81 56.8
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 2.4e-13 80.9 145 35.9
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 2.7e-12 77.4 97 42.3
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.0e-11 75.5 208 28.4
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 3.6e-09 67.0 104 35.6
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.4e-08 65.1 212 30.2
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 1.2e-07 62.0 230 27.4
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 1.3e-06 58.5 201 25.4
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 1.7e-06 58.2 62 41.9
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 3.7e-06 57.0 55 45.5


User provided reference genes

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