Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 0.0e+00 1845.9 955 100.0
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 1.5e-96 358.6 954 29.2
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 1.5e-80 305.4 943 27.6
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 2.1e-79 301.6 949 27.6
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 8.2e-79 299.7 936 27.0
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 1.4e-78 298.9 949 26.9
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 1.4e-78 298.9 942 26.2
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 3.1e-78 297.7 985 25.6
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 1.3e-76 292.4 944 27.0
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 1.3e-76 292.4 942 25.6
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.7e-76 292.0 961 26.3
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 2.2e-76 291.6 901 26.6
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 8.4e-76 289.7 954 27.3
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 2.5e-75 288.1 899 26.3
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 3.2e-75 287.7 988 26.0
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 4.2e-75 287.3 950 26.4
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 5.5e-75 287.0 945 26.2
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 9.3e-75 286.2 953 27.3
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 1.2e-74 285.8 954 26.4
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 1.2e-74 285.8 940 26.1
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 3.5e-74 284.3 951 26.5
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 3.5e-74 284.3 941 25.6
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 4.6e-74 283.9 907 25.2
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 6.0e-74 283.5 919 27.1
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 7.9e-74 283.1 972 24.9
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 1.8e-73 282.0 916 25.2
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.8e-73 282.0 904 26.8
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 2.3e-73 281.6 954 27.4
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 1.9e-72 278.5 951 25.3
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 9.7e-72 276.2 943 26.1
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 1.3e-71 275.8 921 25.1
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 1.3e-71 275.8 935 26.1
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.6e-71 275.4 932 27.1
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 8.2e-71 273.1 918 25.8
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 1.1e-70 272.7 908 25.1
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 1.4e-70 272.3 939 25.2
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.8e-70 271.9 899 27.6
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 5.3e-70 270.4 938 26.1
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 6.9e-70 270.0 854 28.7
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 1.2e-69 269.2 1003 24.0
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.9e-69 266.9 818 27.8
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 1.7e-68 265.4 949 26.0
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 3.8e-68 264.2 965 25.9
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 3.2e-67 261.2 970 25.4
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 7.2e-67 260.0 982 26.0
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 8.8e-65 253.1 978 24.9
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.5e-64 252.3 885 27.2
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.7e-63 248.8 854 26.2
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 6.3e-63 246.9 923 25.2
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 1.8e-62 245.4 932 25.4
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 3.1e-62 244.6 807 26.6
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 9.1e-62 243.0 809 26.7
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 3.4e-61 241.1 778 26.5
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 1.1e-59 236.1 896 24.9
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 1.2e-58 232.6 919 25.9
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.4e-57 229.2 794 27.0
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.5e-56 225.7 809 25.6
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 3.3e-56 224.6 859 25.0
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 4.4e-56 224.2 844 27.5
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 1.7e-55 222.2 961 24.7
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 8.2e-55 219.9 864 25.5
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 7.7e-53 213.4 942 24.8
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 1.7e-52 212.2 795 25.8
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.4e-51 209.1 724 25.7
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 1.9e-51 208.8 625 28.0
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 2.5e-51 208.4 696 26.3
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 7.2e-51 206.8 905 23.5
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 7.2e-51 206.8 667 27.3
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 1.2e-50 206.1 762 26.5
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 3.6e-50 204.5 725 26.2
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 1.8e-49 202.2 481 30.1
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 3.3e-48 198.0 977 23.8
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 1.7e-47 195.7 595 27.1
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 3.1e-46 191.4 883 23.8
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 5.3e-46 190.7 857 25.0
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 4.2e-43 181.0 484 29.3
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 1.4e-41 176.0 470 28.7
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 1.4e-41 176.0 497 28.4
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 1.7e-31 142.5 442 28.1
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 4.8e-31 141.0 314 30.3
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 1.8e-30 139.0 345 28.1
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 1.3e-28 132.9 303 31.7
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 1.6e-26 125.9 390 28.2
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 1.8e-25 122.5 361 25.8
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 1.3e-23 116.3 294 28.9
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 2.3e-20 105.5 302 25.2
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 2.3e-20 105.5 209 31.1
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 8.6e-20 103.6 278 28.8
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 2.0e-13 82.4 177 30.5
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 3.9e-12 78.2 411 22.6
VMungo1383G1144 Vigna mungo HOM05D006439 ORTHO05D008152 6.6e-12 77.4 173 28.3
Lj3A1001G26 Lonicera japonica HOM05D006439 ORTHO05D008152 1.1e-11 76.6 140 32.9
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 2.1e-10 72.4 260 24.2
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 3.6e-10 71.6 162 27.8
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 6.8e-09 67.4 100 41.0
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 3.4e-08 65.1 198 24.7
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 4.1e-06 58.2 116 29.3
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 5.4e-06 57.8 101 29.7


User provided reference genes

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