Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 9.3e-80 300.1 142 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 3.6e-39 165.2 112 62.5
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 4.8e-36 154.8 135 54.8
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 7.2e-32 141.0 129 48.8
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 1.6e-31 139.8 111 55.9
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 2.7e-31 139.0 123 56.1
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 4.7e-31 138.3 108 57.4
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 8.0e-31 137.5 116 51.7
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 1.0e-30 137.1 110 54.5
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 1.8e-30 136.3 134 48.5
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 1.8e-30 136.3 117 51.3
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.8e-30 136.3 122 47.5
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 3.0e-30 135.6 105 54.3
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 4.0e-30 135.2 117 47.9
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 6.7e-30 134.4 123 50.4
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 6.7e-30 134.4 105 55.2
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 6.7e-30 134.4 105 53.3
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 1.2e-29 133.7 123 48.8
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.2e-29 133.7 105 54.3
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.5e-29 133.3 113 50.4
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.0e-29 132.9 138 44.9
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.0e-29 132.9 138 44.9
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 2.0e-29 132.9 131 44.3
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 2.0e-29 132.9 105 52.4
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.6e-29 132.5 112 48.2
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 2.6e-29 132.5 105 52.4
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 3.3e-29 132.1 105 51.4
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 3.3e-29 132.1 105 51.4
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 3.3e-29 132.1 105 53.3
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 4.4e-29 131.7 112 50.9
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 4.4e-29 131.7 117 48.7
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 4.4e-29 131.7 105 51.4
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 5.7e-29 131.3 103 53.4
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 7.5e-29 131.0 112 54.5
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 7.5e-29 131.0 105 50.5
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 9.7e-29 130.6 112 49.1
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 9.7e-29 130.6 119 47.1
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 9.7e-29 130.6 105 52.4
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 1.3e-28 130.2 120 48.3
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.3e-28 130.2 120 48.3
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 1.3e-28 130.2 120 48.3
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 1.3e-28 130.2 111 51.4
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.3e-28 130.2 105 50.5
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.3e-28 130.2 106 50.9
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.3e-28 130.2 116 49.1
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 1.7e-28 129.8 120 48.3
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 1.7e-28 129.8 118 49.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.7e-28 129.8 109 48.6
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 2.2e-28 129.4 105 49.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 2.2e-28 129.4 105 49.5
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.2e-28 129.4 114 52.6
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 2.8e-28 129.0 123 44.7
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 2.8e-28 129.0 105 51.4
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 3.7e-28 128.6 124 48.4
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 3.7e-28 128.6 118 50.0
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 6.3e-28 127.9 109 49.5
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 6.3e-28 127.9 110 50.9
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 6.3e-28 127.9 110 50.9
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 6.3e-28 127.9 110 50.9
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 6.3e-28 127.9 113 50.4
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 6.3e-28 127.9 130 43.8
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 6.3e-28 127.9 116 47.4
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 8.2e-28 127.5 124 46.8
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 8.2e-28 127.5 105 50.5
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 8.2e-28 127.5 110 49.1
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 1.1e-27 127.1 117 47.9
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 1.1e-27 127.1 124 46.0
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.1e-27 127.1 117 47.9
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 1.4e-27 126.7 101 56.4
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 1.4e-27 126.7 105 50.5
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.4e-27 126.7 105 52.4
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 1.8e-27 126.3 117 47.0
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 1.8e-27 126.3 105 51.4
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 1.8e-27 126.3 112 51.8
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 1.8e-27 126.3 111 47.7
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 2.4e-27 125.9 105 50.5
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 3.1e-27 125.6 108 48.1
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 3.1e-27 125.6 109 50.5
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 3.1e-27 125.6 102 52.9
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.1e-27 125.2 105 52.4
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 5.3e-27 124.8 120 44.2
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 7.0e-27 124.4 125 46.4
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 7.0e-27 124.4 106 48.1
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 7.0e-27 124.4 105 51.4
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 9.1e-27 124.0 120 46.7
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.2e-26 123.6 111 47.7
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 1.2e-26 123.6 92 58.7
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.6e-26 123.2 108 49.1
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 1.6e-26 123.2 109 49.5
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 2.0e-26 122.9 109 48.6
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 2.7e-26 122.5 106 47.2
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 3.5e-26 122.1 109 48.6
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 4.5e-26 121.7 108 49.1
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 5.9e-26 121.3 108 47.2
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.0e-25 120.6 116 45.7
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 3.8e-25 118.6 113 45.1
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.0e-25 118.2 101 51.5
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 7.2e-24 114.4 132 40.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 1.2e-23 113.6 133 39.8
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 1.6e-23 113.2 108 50.0
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 6.1e-23 111.3 143 39.2
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.4e-22 110.2 107 48.6
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 3.0e-22 109.0 162 37.0
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 5.2e-22 108.2 98 50.0
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 8.8e-22 107.5 116 45.7
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.8e-22 107.5 98 50.0
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 1.2e-21 107.1 134 38.1
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 9.8e-21 104.0 166 33.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 1.2e-15 87.0 74 48.6
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 6.8e-14 81.3 89 47.2
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 7.5e-13 77.8 52 61.5
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.8e-12 75.9 62 51.6
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 6.3e-12 74.7 74 39.2
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 3.1e-11 72.4 121 33.9
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 4.0e-06 55.5 45 48.9
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 8.9e-06 54.3 43 51.2


User provided reference genes

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