Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0108s0039 Marchantia polymorpha HOM05D004586 ORTHO05D005266 0.0e+00 1630.2 863 100.0
CBR_g12767 Chara braunii HOM05D004586 ORTHO05D005266 6.7e-40 170.2 213 48.4
SMO137G0274 Selaginella moellendorffii HOM05D004586 ORTHO05D005266 2.0e-39 168.7 140 58.6
AagrBONN_evm.TU.Sc2ySwM_117.2920 Anthoceros agrestis HOM05D004586 ORTHO05D005266 1.4e-37 162.5 216 46.8
Pp3c14_14050 Physcomitrium patens HOM05D004586 ORTHO05D005266 7.0e-37 160.2 160 49.4
CsaV3_2G036510 Cucumis sativus L. HOM05D004586 ORTHO05D005266 1.2e-36 159.5 179 49.2
Lalb_Chr01g0005391 Lupinus albus HOM05D004586 ORTHO05D005266 1.2e-36 159.5 156 52.6
HPP92_014062 Vanilla planifolia HOM05D004586 ORTHO05D005266 1.2e-36 159.5 193 47.7
MELO3C003861.2 Cucumis melo HOM05D004586 ORTHO05D005266 2.7e-36 158.3 179 48.6
FAN02G1766 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.7e-36 158.3 176 51.7
Psat0s4261g0040 Pisum sativum HOM05D004586 ORTHO05D005266 2.7e-36 158.3 162 52.5
FAN14G4866 Fragaria x ananassa HOM05D004586 ORTHO05D005266 3.5e-36 157.9 201 48.8
Nitab4.5_0009520g0030 Nicotiana tabacum HOM05D004586 ORTHO05D005266 3.5e-36 157.9 225 44.9
SGA_v2.0_scaffold159G37633 Striga asiatica HOM05D004586 ORTHO05D005266 3.5e-36 157.9 163 52.1
CiPaw.03G171000 Carya illinoinensis HOM05D004586 ORTHO05D005266 5.9e-36 157.1 160 52.5
VMungo1127G2109 Vigna mungo HOM05D004586 ORTHO05D005266 7.7e-36 156.8 160 53.1
Pp3c10_10230 Physcomitrium patens HOM05D004586 ORTHO05D005266 1.0e-35 156.4 162 50.0
Sed0007770 Sechium edule HOM05D004586 ORTHO05D005266 1.0e-35 156.4 163 49.7
ClCG02G017410 Citrullus lanatus HOM05D004586 ORTHO05D005266 1.3e-35 156.0 163 50.3
Ciclev10014470m.g Citrus clementina HOM05D004586 ORTHO05D005266 1.3e-35 156.0 234 41.9
Solyc07g054460.4 Solanum lycopersicum HOM05D004586 ORTHO05D005266 1.3e-35 156.0 147 55.8
Migut.H01030 Erythranthe guttata HOM05D004586 ORTHO05D005266 1.7e-35 155.6 147 56.5
FvH4_6g44910 Fragaria vesca HOM05D004586 ORTHO05D005266 1.7e-35 155.6 199 48.2
arahy.Tifrunner.gnm1.ann1.FC6AAX Arachis hypogaea HOM05D004586 ORTHO05D005266 2.2e-35 155.2 161 51.6
FAN05G3704 Fragaria x ananassa HOM05D004586 ORTHO05D005266 2.2e-35 155.2 246 43.5
Lj3g0023901 Lotus japonicus HOM05D004586 ORTHO05D005266 2.2e-35 155.2 160 54.4
MELO3C021880.2 Cucumis melo HOM05D004586 ORTHO05D005266 2.9e-35 154.8 177 48.6
Nitab4.5_0003018g0070 Nicotiana tabacum HOM05D004586 ORTHO05D005266 2.9e-35 154.8 237 43.0
RcHm_v2.0_Chr2g0162091 Rosa chinensis HOM05D004586 ORTHO05D005266 3.8e-35 154.5 174 51.1
TPR.G21660 Trifolium pratense HOM05D004586 ORTHO05D005266 3.8e-35 154.5 187 49.2
CSS0039758 Camellia sinensis var. sinensis HOM05D004586 ORTHO05D005266 5.0e-35 154.1 207 43.5
FAN09G2343 Fragaria x ananassa HOM05D004586 ORTHO05D005266 5.0e-35 154.1 246 43.9
HanXRQChr14g0441421 Helianthus annuus HOM05D004586 ORTHO05D005266 5.0e-35 154.1 222 42.3
Phvul.011G112400 Phaseolus vulgaris HOM05D004586 ORTHO05D005266 5.0e-35 154.1 160 53.1
Actinidia09891 Actinidia chinensis HOM05D004586 ORTHO05D005266 6.5e-35 153.7 232 42.2
Haze_13103 Corylus avellana HOM05D004586 ORTHO05D005266 8.5e-35 153.3 201 43.8
Os05g0502800 Oryza sativa ssp. japonica HOM05D004586 ORTHO05D005266 8.5e-35 153.3 194 44.8
Glyma.06G297000 Glycine max HOM05D004586 ORTHO05D005266 1.1e-34 152.9 160 51.9
MBI02_g10548_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 1.1e-34 152.9 171 48.0
MD09G1092000 Malus domestica HOM05D004586 ORTHO05D005266 1.1e-34 152.9 195 45.6
Oeu025511.1 Olea europaea HOM05D004586 ORTHO05D005266 1.1e-34 152.9 147 54.4
THA.LOC104826023 Tarenaya hassleriana HOM05D004586 ORTHO05D005266 1.5e-34 152.5 222 43.2
CANSAT64G2104 Cannabis sativa HOM05D004586 ORTHO05D005266 1.9e-34 152.1 160 51.2
HanXRQChr05g0140481 Helianthus annuus HOM05D004586 ORTHO05D005266 1.9e-34 152.1 222 42.3
SGA_v2.0_scaffold49G18309 Striga asiatica HOM05D004586 ORTHO05D005266 1.9e-34 152.1 218 44.0
Sopen07g028400 Solanum pennellii HOM05D004586 ORTHO05D005266 2.5e-34 151.8 176 48.9
TAR627G0949 Trochodendron aralioides HOM05D004586 ORTHO05D005266 3.2e-34 151.4 184 43.5
Lsat_1_v5_gn_4_68860 Lactuca sativa HOM05D004586 ORTHO05D005266 4.2e-34 151.0 239 40.6
Prupe.3G233000 Prunus persica HOM05D004586 ORTHO05D005266 7.2e-34 150.2 160 51.2
Cfa014556 Carpinus fangiana HOM05D004586 ORTHO05D005266 9.4e-34 149.8 199 45.2
MD17G1081900 Malus domestica HOM05D004586 ORTHO05D005266 9.4e-34 149.8 232 41.8
Manes.12G079600 Manihot esculenta HOM05D004586 ORTHO05D005266 9.4e-34 149.8 181 46.4
CARHR002890 Cardamine hirsuta HOM05D004586 ORTHO05D005266 1.2e-33 149.4 171 48.0
Cpa.g.sc34.112 Carica papaya HOM05D004586 ORTHO05D005266 1.2e-33 149.4 241 41.5
CDE02G0135 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.6e-33 149.1 145 53.8
PGR042G3101 Punica granatum HOM05D004586 ORTHO05D005266 1.6e-33 149.1 221 42.5
AL1G13040 Arabidopsis lyrata HOM05D004586 ORTHO05D005266 2.1e-33 148.7 172 48.3
Carub.0001s0267 Capsella rubella HOM05D004586 ORTHO05D005266 2.1e-33 148.7 202 45.0
ECA234G1777 Erigeron canadensis HOM05D004586 ORTHO05D005266 2.1e-33 148.7 236 39.4
PGSC0003DMG400018364 Solanum tuberosum HOM05D004586 ORTHO05D005266 2.1e-33 148.7 176 47.7
BcaC05g24523 Brassica carinata HOM05D004586 ORTHO05D005266 2.7e-33 148.3 164 50.0
C05p01990 Brassica napus HOM05D004586 ORTHO05D005266 2.7e-33 148.3 164 50.0
BolC5t28977H Brassica oleracea HOM05D004586 ORTHO05D005266 2.7e-33 148.3 164 50.0
arahy.Tifrunner.gnm1.ann1.SANC69 Arachis hypogaea HOM05D004586 ORTHO05D005266 3.6e-33 147.9 154 51.3
A10p02080 Brassica napus HOM05D000330 ORTHO05D005266 3.6e-33 147.9 173 46.8
BraA10t42477Z Brassica rapa HOM05D000330 ORTHO05D000209 3.6e-33 147.9 173 46.8
PSO675G0516 Papaver somniferum HOM05D004586 ORTHO05D005266 3.6e-33 147.9 183 47.0
Eucgr.B03848 Eucalyptus grandis HOM05D004586 ORTHO05D005266 4.7e-33 147.5 228 39.9
SalBow1G4799 Salvia bowleyana HOM05D004586 ORTHO05D005266 4.7e-33 147.5 172 48.3
SalBow7G1236 Salvia bowleyana HOM05D004586 ORTHO05D005266 4.7e-33 147.5 172 48.3
Sc12g0002770 Simmondsia chinensis HOM05D004586 ORTHO05D005266 4.7e-33 147.5 186 44.1
PSO541G0834 Papaver somniferum HOM05D004586 ORTHO05D005266 6.1e-33 147.1 183 46.4
EL10As5g23555 Beta vulgaris HOM05D004586 ORTHO05D005266 1.4e-32 146.0 162 49.4
CAN.G78.83 Capsicum annuum HOM05D004586 ORTHO05D005266 1.4e-32 146.0 224 41.5
MSTRG.14187 Avicennia marina HOM05D004586 ORTHO05D005266 1.8e-32 145.6 187 43.9
Peaxi162Scf00007g02845 Petunia axillaris HOM05D004586 ORTHO05D005266 1.8e-32 145.6 168 49.4
Sp1g02460 Schrenkiella parvula HOM05D004586 ORTHO05D005266 1.8e-32 145.6 189 46.6
Medtr0072s0050 Medicago truncatula HOM05D004586 ORTHO05D005266 2.3e-32 145.2 186 46.8
QL10p048480 Quercus lobata HOM05D004586 ORTHO05D005266 2.3e-32 145.2 289 38.8
TAR629G0893 Trochodendron aralioides HOM05D004586 ORTHO05D005266 2.3e-32 145.2 200 44.0
Actinidia12449 Actinidia chinensis HOM05D004586 ORTHO05D005266 3.0e-32 144.8 266 39.5
ATR0693G407 Amborella trichopoda HOM05D004586 ORTHO05D005266 3.0e-32 144.8 195 44.1
COL.COLO4_13701 Corchorus olitorius HOM05D004586 ORTHO05D005266 3.0e-32 144.8 160 48.8
Thecc.02G173500 Theobroma cacao HOM05D004586 ORTHO05D005266 3.0e-32 144.8 160 49.4
AT1G03530 Arabidopsis thaliana HOM05D004586 ORTHO05D005266 4.0e-32 144.4 213 43.2
TWI18G0514 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 5.2e-32 144.1 165 48.5
SEGI_15076 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 6.8e-32 143.7 317 37.9
TWI36G0730 Tripterygium wilfordii HOM05D004586 ORTHO05D005266 6.8e-32 143.7 184 47.3
Ca_20687_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 8.8e-32 143.3 164 49.4
Duzib052G0504 Durio zibethinus HOM05D004586 ORTHO05D005266 8.8e-32 143.3 160 50.6
PSO384G2677 Papaver somniferum HOM05D004586 ORTHO05D005266 8.8e-32 143.3 160 48.1
AUR62035735 Chenopodium quinoa HOM05D004586 ORTHO05D005266 1.2e-31 142.9 161 49.1
Glyma.12G108100 Glycine max HOM05D004586 ORTHO05D005266 1.2e-31 142.9 159 47.2
Potri.019G104400 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.5e-31 142.5 196 44.4
Ca_27565_v3 Cicer arietinum L. HOM05D004586 ORTHO05D005266 2.0e-31 142.1 172 46.5
Thhalv10006867m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 3.4e-31 141.4 208 41.3
Gorai.013G166800 Gossypium raimondii HOM05D004586 ORTHO05D005266 3.4e-31 141.4 162 46.9
COL.COLO4_08510 Corchorus olitorius HOM05D004586 ORTHO05D005266 4.4e-31 141.0 160 48.1
Atru.chr6.3049 Acer truncatum HOM05D004586 ORTHO05D005266 5.7e-31 140.6 230 40.9
AUR62000198 Chenopodium quinoa HOM05D004586 ORTHO05D005266 5.7e-31 140.6 155 49.7
Lj1C734T7 Lonicera japonica HOM05D004586 ORTHO05D005266 5.7e-31 140.6 248 38.3
BcaB02g06919 Brassica carinata HOM05D004586 ORTHO05D005266 2.8e-30 138.3 267 39.0
unitig_26.g9937 Utricularia gibba HOM05D004586 ORTHO05D005266 4.8e-30 137.5 234 39.3
GSVIVG01030569001 Vitis vinifera HOM05D004586 ORTHO05D005266 6.3e-30 137.1 369 32.0
Cc00_g21120 Coffea canephora HOM05D004586 ORTHO05D005266 8.3e-30 136.7 159 45.9
Zm00001eb292050 Zea mays HOM05D004586 ORTHO05D005266 8.3e-30 136.7 167 44.9
Aa31LG1G20890 Aethionema arabicum HOM05D004586 ORTHO05D005266 1.1e-29 136.3 160 49.4
Hund09647 Selenicereus undatus HOM05D004586 ORTHO05D005266 1.4e-29 136.0 142 50.0
BraA08t35631Z Brassica rapa HOM05D004586 ORTHO05D005266 2.4e-29 135.2 164 48.2
A08p37340 Brassica napus HOM05D004586 ORTHO05D005266 5.4e-29 134.0 164 47.0
C08p00660 Brassica napus HOM05D004586 ORTHO05D005266 9.1e-29 133.3 167 47.3
Nitab4.5_0007732g0010 Nicotiana tabacum HOM05D004586 ORTHO05D005266 1.2e-28 132.9 148 49.3
Potri.013G145300 Populus trichocarpa HOM05D004586 ORTHO05D005266 1.6e-28 132.5 217 41.5
Rhsim06G0149700 Rhododendron simsii HOM05D004586 ORTHO05D005266 1.6e-28 132.5 273 35.5
Duzib106G1111 Durio zibethinus HOM05D004586 ORTHO05D005266 4.5e-28 131.0 323 32.8
SHI10466 Sapria himalayana HOM05D004586 ORTHO05D005266 5.9e-28 130.6 210 41.0
Gohir.A13G144300 Gossypium hirsutum HOM05D004586 ORTHO05D005266 7.7e-28 130.2 260 35.0
BolC8t46864H Brassica oleracea HOM05D004586 ORTHO05D005266 1.7e-27 129.0 151 47.7
Nn1g03938 Nelumbo nucifera HOM05D004586 ORTHO05D005266 2.2e-27 128.6 152 43.4
vmacro12267 Vaccinium macrocarpon HOM05D004586 ORTHO05D005266 5.0e-27 127.5 287 36.2
Gohir.D13G149100 Gossypium hirsutum HOM05D004586 ORTHO05D005266 8.5e-27 126.7 278 34.5
Sabra13G0117000 Salix brachista HOM05D004586 ORTHO05D005266 1.5e-26 125.9 280 37.1
Peaxi162Scf00485g00032 Petunia axillaris HOM05D004586 ORTHO05D005266 5.5e-26 124.0 251 37.8
Hma1.2p1_0875F.1_g231553 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.2e-25 122.9 299 34.8
Hma1.2p1_0875F.1_g231580 Hydrangea macrophylla HOM05D004586 ORTHO05D005266 1.2e-25 122.9 299 34.8
Lj3g0000702 Lotus japonicus HOM05D004586 ORTHO05D005266 1.2e-25 122.9 154 44.8
Ah.01g003940 Amaranthus hybridus HOM05D004586 ORTHO05D005266 1.6e-25 122.5 185 37.8
arahy.Tifrunner.gnm1.ann1.IS01QF Arachis hypogaea HOM05D004586 ORTHO05D005266 1.6e-25 122.5 166 39.8
Thhalv10024822m.g Eutrema salsugineum HOM05D004586 ORTHO05D005266 1.6e-25 122.5 204 40.2
Medtr2g090095 Medicago truncatula HOM05D004586 ORTHO05D005266 1.6e-25 122.5 184 40.8
Psat5g270160 Pisum sativum HOM05D004586 ORTHO05D005266 2.7e-25 121.7 199 39.2
CDE02G4059 Ceratophyllum demersum HOM05D004586 ORTHO05D005266 1.5e-23 115.9 165 42.4
DCAR_019194 Daucus carota HOM05D004586 ORTHO05D005266 3.4e-23 114.8 168 42.3
Lalb_Chr22g0356411 Lupinus albus HOM05D004586 ORTHO05D005266 4.4e-23 114.4 134 42.5
arahy.Tifrunner.gnm1.ann1.7D4Z5S Arachis hypogaea HOM05D004586 ORTHO05D005266 1.3e-22 112.8 229 34.1
TPR.G27075 Trifolium pratense HOM05D004586 ORTHO05D005266 4.9e-22 110.9 150 44.7
CAN.G996.7 Capsicum annuum HOM05D004586 ORTHO05D005266 1.1e-21 109.8 200 40.0
SEGI_36208 Sequoiadendron giganteum HOM05D004586 ORTHO05D005266 5.4e-21 107.5 262 35.1
Dinv15471 Davidia involucrata HOM05D004586 ORTHO05D005266 2.6e-15 88.6 357 27.5
BcaB01g00913 Brassica carinata HOM05D004586 ORTHO05D005266 4.1e-13 81.3 72 51.4
BcaB08g36102 Brassica carinata HOM05D004586 ORTHO05D005266 4.1e-13 81.3 95 44.2
MBI02_g27225_MAGBIO Magnolia biondii HOM05D004586 ORTHO05D005266 7.3e-10 70.5 212 33.5
Psat0s10217g0080 Pisum sativum HOM05D004586 ORTHO05D005266 1.2e-09 69.7 83 51.8
Cre10.g467100 Chlamydomonas reinhardtii HOM05D004586 ORTHO05D005266 8.0e-09 67.0 125 35.2
Medtr7g116780 Medicago truncatula HOM05D004586 ORTHO05D005266 4.0e-08 64.7 62 48.4


User provided reference genes

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