Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0107s0002 Marchantia polymorpha HOM05D004947 ORTHO05D006077 0.0e+00 2268.8 1171 100.0
Mapoly0483s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 3.7e-214 749.6 392 96.4
Mapoly0002s0001 Marchantia polymorpha HOM05D004947 ORTHO05D006077 7.2e-162 575.9 303 95.4
AagrBONN_evm.TU.Sc2ySwM_228.3588 Anthoceros agrestis HOM05D004947 ORTHO05D006077 1.8e-67 262.3 343 44.6
Pp3c21_530 Physcomitrium patens HOM05D004947 ORTHO05D006077 6.3e-57 227.3 1164 26.4
Pp3c22_5670 Physcomitrium patens HOM05D004947 ORTHO05D006077 3.0e-51 208.4 817 27.9
SEGI_09258 Sequoiadendron giganteum HOM05D004947 ORTHO05D006077 6.3e-49 200.7 241 41.9
ATR0171G039 Amborella trichopoda HOM05D004947 ORTHO05D006077 5.5e-45 187.6 294 37.1
CsaV3_6G045960 Cucumis sativus L. HOM05D004947 ORTHO05D006077 2.3e-43 182.2 283 38.2
RcHm_v2.0_Chr2g0116221 Rosa chinensis HOM05D004947 ORTHO05D006077 8.8e-43 180.3 284 38.0
TAR625G0980 Trochodendron aralioides HOM05D004947 ORTHO05D006077 2.0e-42 179.1 290 36.6
Nitab4.5_0002843g0020 Nicotiana tabacum HOM05D004947 ORTHO05D006077 2.8e-41 175.3 302 35.1
Nn1g00054 Nelumbo nucifera HOM05D004947 ORTHO05D006077 6.3e-41 174.1 313 34.2
Sed0009808 Sechium edule HOM05D004947 ORTHO05D006077 6.3e-41 174.1 309 36.2
Manes.13G077600 Manihot esculenta HOM05D004947 ORTHO05D006077 8.3e-41 173.7 336 33.3
TAR376G0315 Trochodendron aralioides HOM05D004947 ORTHO05D006077 1.4e-40 172.9 284 36.3
MBI03_g11138_MAGBIO Magnolia biondii HOM05D004947 ORTHO05D006077 1.8e-40 172.6 309 35.6
Nitab4.5_0000156g0160 Nicotiana tabacum HOM05D004947 ORTHO05D006077 3.1e-40 171.8 317 35.0
TWI53G2111 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 3.1e-40 171.8 328 35.1
Manes.12G141400 Manihot esculenta HOM05D004947 ORTHO05D006077 4.1e-40 171.4 281 35.9
PGR102G0173 Punica granatum HOM05D004947 ORTHO05D006077 4.1e-40 171.4 287 36.2
Lalb_Chr11g0068011 Lupinus albus HOM05D004947 ORTHO05D006077 5.4e-40 171.0 281 36.3
Medtr3g094760 Medicago truncatula HOM05D004947 ORTHO05D006077 5.4e-40 171.0 281 36.3
arahy.Tifrunner.gnm1.ann1.V2ZAQJ Arachis hypogaea HOM05D004947 ORTHO05D006077 7.0e-40 170.6 289 36.0
Peaxi162Scf01006g00315 Petunia axillaris HOM05D004947 ORTHO05D006077 7.0e-40 170.6 305 34.4
Eucgr.H04830 Eucalyptus grandis HOM05D004947 ORTHO05D006077 1.2e-39 169.9 282 35.1
Sopen04g023630 Solanum pennellii HOM05D004947 ORTHO05D006077 1.6e-39 169.5 308 34.7
arahy.Tifrunner.gnm1.ann1.XRAY4T Arachis hypogaea HOM05D004947 ORTHO05D006077 2.0e-39 169.1 289 35.6
TWI74G1183 Tripterygium wilfordii HOM05D004947 ORTHO05D006077 2.7e-39 168.7 363 33.6
CANSAT01G0537 Cannabis sativa HOM05D004947 ORTHO05D006077 4.5e-39 167.9 366 31.7
PGSC0003DMG402012957 Solanum tuberosum HOM05D004947 ORTHO05D006077 7.7e-39 167.2 308 34.1
Cfa002745 Carpinus fangiana HOM05D004947 ORTHO05D006077 1.0e-38 166.8 280 34.6
Dinv42703 Davidia involucrata HOM05D004947 ORTHO05D006077 1.0e-38 166.8 292 37.0
Oeu056486.1 Olea europaea HOM05D004947 ORTHO05D006077 1.3e-38 166.4 309 35.0
QL06p032353 Quercus lobata HOM05D004947 ORTHO05D006077 2.3e-38 165.6 315 33.7
Ca_16888_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 2.9e-38 165.2 281 35.9
Atru.chr4.372 Acer truncatum HOM05D004947 ORTHO05D006077 8.6e-38 163.7 303 35.6
Atru.chr4.373 Acer truncatum HOM05D004947 ORTHO05D006077 8.6e-38 163.7 303 35.6
CAN.G1854.1 Capsicum annuum HOM05D004947 ORTHO05D006077 1.5e-37 162.9 310 33.5
CDE05G2725 Ceratophyllum demersum HOM05D004947 ORTHO05D006077 1.9e-37 162.5 305 32.5
Duzib147G0355 Durio zibethinus HOM05D004947 ORTHO05D006077 1.9e-37 162.5 393 32.3
CiPaw.03G134900 Carya illinoinensis HOM05D004947 ORTHO05D006077 2.5e-37 162.2 280 34.6
vmacro12909 Vaccinium macrocarpon HOM05D004947 ORTHO05D006077 2.5e-37 162.2 310 34.5
SalBow5G4162 Salvia bowleyana HOM05D004947 ORTHO05D006077 3.3e-37 161.8 302 35.1
Gohir.A02G134000 Gossypium hirsutum HOM05D004947 ORTHO05D006077 5.5e-37 161.0 291 34.4
CiPaw.04G092600 Carya illinoinensis HOM05D004947 ORTHO05D006077 9.5e-37 160.2 298 33.6
Solyc04g054170.4 Solanum lycopersicum HOM05D004947 ORTHO05D006077 2.1e-36 159.1 332 32.2
Gohir.D03G045400 Gossypium hirsutum HOM05D004947 ORTHO05D006077 2.8e-36 158.7 291 33.7
Lj1g0026570 Lotus japonicus HOM05D004947 ORTHO05D006077 2.8e-36 158.7 390 29.2
Prupe.6G175000 Prunus persica HOM05D004947 ORTHO05D006077 2.8e-36 158.7 286 34.6
Rhsim10G0151500 Rhododendron simsii HOM05D004947 ORTHO05D006077 2.8e-36 158.7 297 34.7
ClCG01G019270 Citrullus lanatus HOM05D004947 ORTHO05D006077 3.6e-36 158.3 322 32.6
Gorai.003G046500 Gossypium raimondii HOM05D004947 ORTHO05D006077 3.6e-36 158.3 291 34.4
Lj4A878G34 Lonicera japonica HOM05D004947 ORTHO05D006077 3.6e-36 158.3 281 33.1
TPR.G2194 Trifolium pratense HOM05D004947 ORTHO05D006077 3.6e-36 158.3 363 30.9
PSO675G5310 Papaver somniferum HOM05D004947 ORTHO05D006077 4.7e-36 157.9 372 33.3
Lsat_1_v5_gn_2_65461 Lactuca sativa HOM05D004947 ORTHO05D006077 6.1e-36 157.5 291 32.0
SGA_v2.0_scaffold47G17714 Striga asiatica HOM05D004947 ORTHO05D006077 6.1e-36 157.5 334 31.4
Ca_17699_v3 Cicer arietinum L. HOM05D004947 ORTHO05D006077 8.0e-36 157.1 350 29.7
Glyma.06G145800 Glycine max HOM05D004947 ORTHO05D006077 8.0e-36 157.1 300 32.0
PSO541G1244 Papaver somniferum HOM05D004947 ORTHO05D006077 1.0e-35 156.8 373 32.4
Migut.L00078 Erythranthe guttata HOM05D004947 ORTHO05D006077 4.0e-35 154.8 319 33.2
Thecc.01G111600 Theobroma cacao HOM05D004947 ORTHO05D006077 4.0e-35 154.8 280 34.3
Ciclev10025244m.g Citrus clementina HOM05D004947 ORTHO05D006077 5.2e-35 154.5 288 32.6
Sc03g0004250 Simmondsia chinensis HOM05D004947 ORTHO05D006077 6.8e-35 154.1 374 31.0
Potri.005G083600 Populus trichocarpa HOM05D004947 ORTHO05D006077 8.9e-35 153.7 403 31.3
DCAR_014256 Daucus carota HOM05D004947 ORTHO05D006077 1.2e-34 153.3 283 35.0
HPP92_005876 Vanilla planifolia HOM05D004947 ORTHO05D006077 1.2e-34 153.3 289 34.6
HanXRQChr15g0471901 Helianthus annuus HOM05D004947 ORTHO05D006077 1.5e-34 152.9 292 32.2
TPR.G6951 Trifolium pratense HOM05D004947 ORTHO05D006077 1.5e-34 152.9 281 33.1
FAN26G0674 Fragaria x ananassa HOM05D004947 ORTHO05D006077 2.0e-34 152.5 286 35.0
FvH4_1g24620 Fragaria vesca HOM05D004947 ORTHO05D006077 2.6e-34 152.1 279 35.5
FAN28G2993 Fragaria x ananassa HOM05D004947 ORTHO05D006077 2.6e-34 152.1 390 30.0
Psat7g052040 Pisum sativum HOM05D004947 ORTHO05D006077 3.4e-34 151.8 279 33.0
FAN23G3004 Fragaria x ananassa HOM05D004947 ORTHO05D006077 4.4e-34 151.4 314 32.5
Hund19664 Selenicereus undatus HOM05D004947 ORTHO05D006077 4.4e-34 151.4 309 33.7
THA.LOC104818481 Tarenaya hassleriana HOM05D004947 ORTHO05D006077 4.4e-34 151.4 280 32.9
Sabra07G0068900 Salix brachista HOM05D004947 ORTHO05D006077 9.8e-34 150.2 293 32.4
Cc07_g16050 Coffea canephora HOM05D004947 ORTHO05D006077 1.3e-33 149.8 321 32.4
FAN19G2885 Fragaria x ananassa HOM05D004947 ORTHO05D006077 1.7e-33 149.4 279 35.1
Ah.02g124420 Amaranthus hybridus HOM05D004947 ORTHO05D006077 2.2e-33 149.1 314 31.8
Aqoxy5G01985_Aqoxy5G01986 Aquilegia oxysepala HOM05D004947 ORTHO05D006077 2.2e-33 149.1 308 32.1
Psat5g067160 Pisum sativum HOM05D004947 ORTHO05D006077 2.9e-33 148.7 284 33.8
unitig_88.g27735 Utricularia gibba HOM05D004947 ORTHO05D006077 3.7e-33 148.3 281 34.2
Zm00001eb364640 Zea mays HOM05D004947 ORTHO05D006077 4.9e-33 147.9 286 32.5
HanXRQChr14g0446211 Helianthus annuus HOM05D004947 ORTHO05D006077 1.4e-32 146.4 403 28.8
Actinidia16961 Actinidia chinensis HOM05D004947 ORTHO05D006077 1.8e-32 146.0 288 33.0
CBR_g4593 Chara braunii HOM05D004947 ORTHO05D006077 1.6e-31 142.9 308 29.9
BcaC01g02724 Brassica carinata HOM05D004947 ORTHO05D006077 2.7e-31 142.1 302 29.5
C03p61260 Brassica napus HOM05D004947 ORTHO05D006077 2.7e-31 142.1 302 29.5
BolC3t18387H Brassica oleracea HOM05D004947 ORTHO05D006077 2.7e-31 142.1 302 29.5
ECA238G1011 Erigeron canadensis HOM05D004947 ORTHO05D006077 2.7e-31 142.1 318 31.8
Phvul.009G140300 Phaseolus vulgaris HOM05D004947 ORTHO05D006077 2.7e-31 142.1 298 29.5
AUR62003314 Chenopodium quinoa HOM05D004947 ORTHO05D006077 3.5e-31 141.7 367 30.5
EL10Ac6g14744 Beta vulgaris HOM05D004947 ORTHO05D006077 7.8e-31 140.6 301 31.9
A06p31700 Brassica napus HOM05D004947 ORTHO05D006077 7.8e-31 140.6 302 29.1
BraA06t26105Z Brassica rapa HOM05D004947 ORTHO05D006077 7.8e-31 140.6 302 29.1
MELO3C007802.2 Cucumis melo HOM05D004947 ORTHO05D006077 7.8e-31 140.6 242 34.7
COL.COLO4_11020 Corchorus olitorius HOM05D004947 ORTHO05D006077 1.3e-30 139.8 310 31.0
MD01G1017700 Malus domestica HOM05D004947 ORTHO05D006077 5.0e-30 137.9 291 33.0
Os02g0770100 Oryza sativa ssp. japonica HOM05D004947 ORTHO05D006077 8.6e-30 137.1 336 29.8
SalBow5G3891 Salvia bowleyana HOM05D004947 ORTHO05D006077 8.6e-30 137.1 252 34.9
BcaB02g09842 Brassica carinata HOM05D004947 ORTHO05D006077 4.3e-29 134.8 350 27.7
SHI11672 Sapria himalayana HOM05D004947 ORTHO05D006077 1.2e-28 133.3 374 28.3
CARHR293840 Cardamine hirsuta HOM05D004947 ORTHO05D006077 1.6e-28 132.9 284 32.7
CBR_g49522 Chara braunii HOM05D000019 ORTHO05D000048 3.1e-27 128.6 297 28.6
MELO3C007803.2 Cucumis melo HOM05D004947 ORTHO05D006077 6.8e-27 127.5 285 31.6
Sp2g28010 Schrenkiella parvula HOM05D004947 ORTHO05D006077 1.2e-26 126.7 346 28.0
AL8G42430 Arabidopsis lyrata HOM05D004947 ORTHO05D006077 3.4e-26 125.2 285 30.9
Aa31LG1G17040 Aethionema arabicum HOM05D004947 ORTHO05D006077 4.4e-26 124.8 286 31.1
Nn1g05196 Nelumbo nucifera HOM05D004947 ORTHO05D006077 1.3e-25 123.2 161 41.6
Thhalv10003912m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 1.2e-23 116.7 250 30.8
AT5G64930 Arabidopsis thaliana HOM05D004947 ORTHO05D006077 1.0e-22 113.6 284 29.6
VMungo1309G0633 Vigna mungo HOM05D004947 ORTHO05D006077 1.1e-21 110.2 132 43.2
BcaB04g20000 Brassica carinata HOM05D004947 ORTHO05D006077 2.5e-21 109.0 248 29.0
Haze_25032 Corylus avellana HOM05D004947 ORTHO05D006077 2.5e-21 109.0 280 28.9
Cpa.g.sc196.3 Carica papaya HOM05D004947 ORTHO05D006077 5.6e-21 107.8 153 37.9
Thhalv10019768m.g Eutrema salsugineum HOM05D004947 ORTHO05D006077 1.8e-19 102.8 344 26.2
AUR62016269 Chenopodium quinoa HOM05D004947 ORTHO05D006077 1.5e-18 99.8 240 31.2
Carub.0008s2576 Capsella rubella HOM05D004947 ORTHO05D006077 9.2e-16 90.5 248 26.2
SGA_v2.0_scaffold47G17717 Striga asiatica HOM05D004947 ORTHO05D006077 5.2e-11 74.7 93 41.9
GSVIVG01022215001 Vitis vinifera HOM05D004947 ORTHO05D006077 2.6e-10 72.4 171 30.4
FAN23G2837 Fragaria x ananassa HOM05D004947 ORTHO05D006077 5.8e-10 71.2 191 30.9
MCO05G196 Micromonas commoda HOM05D004947 ORTHO05D006077 7.6e-10 70.9 214 27.6
Sabra05G0068700 Salix brachista HOM05D004947 ORTHO05D006077 2.4e-08 65.9 235 26.8
CSS0006585 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 5.4e-08 64.7 125 32.8
CSS0047108 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 5.4e-08 64.7 125 32.8
CSS0010100 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 2.1e-07 62.8 117 30.8
CSS0029975 Camellia sinensis var. sinensis HOM05D004947 ORTHO05D006077 2.7e-07 62.4 117 30.8
QL93p0275_0011 Quercus lobata HOM05D004947 ORTHO05D006077 6.0e-07 61.2 148 30.4


User provided reference genes

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