Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0105s0045 Marchantia polymorpha HOM05D003893 ORTHO05D005167 0.0e+00 3742.6 1902 100.0
TAR375G0027 Trochodendron aralioides HOM05D003893 ORTHO05D005167 0.0e+00 1137.5 1927 37.3
Medtr4g099300 Medicago truncatula HOM05D003893 ORTHO05D005167 0.0e+00 1103.6 1935 36.5
Lalb_Chr09g0329781 Lupinus albus HOM05D003893 ORTHO05D005167 0.0e+00 1095.9 1916 36.6
Phvul.003G225400 Phaseolus vulgaris HOM05D003893 ORTHO05D005167 0.0e+00 1093.2 1944 36.4
Aqoxy5G02623 Aquilegia oxysepala HOM05D003893 ORTHO05D005167 0.0e+00 1087.8 1927 37.0
Glyma.17G148200 Glycine max HOM05D003893 ORTHO05D005167 0.0e+00 1083.6 1937 36.4
Solyc08g077850.2 Solanum lycopersicum HOM05D003893 ORTHO05D005167 0.0e+00 1082.0 1913 36.2
PSO675G1423 Papaver somniferum HOM05D003893 ORTHO05D005167 0.0e+00 1081.6 1907 36.2
RcHm_v2.0_Chr7g0205631 Rosa chinensis HOM05D003893 ORTHO05D005167 0.0e+00 1077.8 1922 36.2
Atru.chr9.1207 Acer truncatum HOM05D003893 ORTHO05D005167 0.0e+00 1077.0 1925 36.4
CANSAT21G1178 Cannabis sativa HOM05D003893 ORTHO05D005167 1.3e-311 1074.3 1919 36.8
PSO732G0344 Papaver somniferum HOM05D003893 ORTHO05D005167 2.6e-311 1073.2 1916 35.9
FvH4_5g20370 Fragaria vesca HOM05D003893 ORTHO05D005167 3.9e-311 1072.4 1914 36.2
Prupe.5G055400 Prunus persica HOM05D003893 ORTHO05D005167 2.6e-310 1069.7 1929 36.5
Dinv25135 Davidia involucrata HOM05D003893 ORTHO05D005167 3.4e-310 1069.3 1940 35.6
Potri.001G150900 Populus trichocarpa HOM05D003893 ORTHO05D005167 9.9e-310 1067.8 1922 36.1
CAN.G572.10 Capsicum annuum HOM05D003893 ORTHO05D005167 5.4e-308 1062.0 1913 36.1
Manes.01G088800 Manihot esculenta HOM05D003893 ORTHO05D005167 3.9e-306 1055.8 1930 36.2
Sopen08g026360 Solanum pennellii HOM05D003893 ORTHO05D005167 1.6e-304 1050.4 1829 36.6
HanXRQChr16g0504541 Helianthus annuus HOM05D003893 ORTHO05D005167 2.8e-304 1049.7 1906 35.1
ECA233G0269 Erigeron canadensis HOM05D003893 ORTHO05D005167 1.1e-303 1047.7 1905 35.3
Lj4g0018101 Lotus japonicus HOM05D003893 ORTHO05D005167 1.5e-302 1043.9 1944 35.8
Thecc.03G240200 Theobroma cacao HOM05D003893 ORTHO05D005167 2.0e-302 1043.5 1933 36.4
Gorai.008G230900 Gossypium raimondii HOM05D003893 ORTHO05D005167 3.4e-302 1042.7 1927 35.8
CARHR224310 Cardamine hirsuta HOM05D003893 ORTHO05D005167 7.6e-302 1041.6 1922 35.4
DCAR_005586 Daucus carota HOM05D003893 ORTHO05D005167 7.6e-302 1041.6 1919 34.8
Sc07g0009060 Simmondsia chinensis HOM05D003893 ORTHO05D005167 2.9e-301 1039.6 1906 35.5
AT4G17610 Arabidopsis thaliana HOM05D003893 ORTHO05D005167 3.7e-301 1039.3 1932 35.5
Peaxi162Scf00301g00417 Petunia axillaris HOM05D003893 ORTHO05D005167 3.7e-301 1039.3 1969 35.1
Thhalv10024195m.g Eutrema salsugineum HOM05D003893 ORTHO05D005167 1.1e-300 1037.7 1913 35.9
MSTRG.1953 Avicennia marina HOM05D003893 ORTHO05D005167 2.4e-300 1036.6 1918 35.1
PGR042G1290 Punica granatum HOM05D003893 ORTHO05D005167 4.1e-300 1035.8 1922 34.7
Cfa012326 Carpinus fangiana HOM05D003893 ORTHO05D005167 9.2e-300 1034.6 1719 37.6
AL7G36990 Arabidopsis lyrata HOM05D003893 ORTHO05D005167 2.7e-299 1033.1 1930 35.6
BraA01t00910Z Brassica rapa HOM05D003893 ORTHO05D005167 6.0e-299 1031.9 1915 35.4
CSS0002187 Camellia sinensis var. sinensis HOM05D003893 ORTHO05D005167 1.0e-298 1031.2 1939 35.3
CsaV3_3G002270 Cucumis sativus L. HOM05D003893 ORTHO05D005167 1.3e-298 1030.8 1922 35.7
Sp7g16550 Schrenkiella parvula HOM05D003893 ORTHO05D005167 1.7e-298 1030.4 1914 35.3
C01p11280 Brassica napus HOM05D003893 ORTHO05D005167 1.9e-297 1026.9 1919 35.1
BcaC09g51627 Brassica carinata HOM05D003893 ORTHO05D005167 1.6e-296 1023.8 1914 35.3
THA.LOC104798352 Tarenaya hassleriana HOM05D003893 ORTHO05D005167 2.8e-296 1023.1 1914 35.2
A01p09670 Brassica napus HOM05D003893 ORTHO05D005167 4.7e-296 1022.3 1913 35.4
Aa31LG6G350 Aethionema arabicum HOM05D003893 ORTHO05D005167 4.0e-295 1019.2 1908 35.6
arahy.Tifrunner.gnm1.ann1.TA1JJE Arachis hypogaea HOM05D003893 ORTHO05D005167 4.0e-295 1019.2 1924 36.0
Migut.E01633 Erythranthe guttata HOM05D003893 ORTHO05D005167 5.2e-295 1018.8 1933 34.4
MELO3C013898.2 Cucumis melo HOM05D003893 ORTHO05D005167 8.9e-295 1018.1 1911 35.6
Carub.0007s2378 Capsella rubella HOM05D003893 ORTHO05D005167 5.8e-294 1015.4 1927 34.8
QL12p008764 Quercus lobata HOM05D003893 ORTHO05D005167 2.2e-293 1013.4 2126 33.3
Zm00001eb000190 Zea mays HOM05D003893 ORTHO05D005167 2.2e-293 1013.4 1913 35.8
BolC1t01093H Brassica oleracea HOM05D003893 ORTHO05D005167 8.4e-293 1011.5 1941 34.7
MD04G1055600 Malus domestica HOM05D003893 ORTHO05D005167 1.9e-292 1010.4 1561 39.3
Gohir.D12G215300 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.2e-291 1007.7 1610 39.1
Ciclev10024446m.g Citrus clementina HOM05D003893 ORTHO05D005167 7.8e-291 1005.0 1972 34.5
arahy.Tifrunner.gnm1.ann1.763U0W Arachis hypogaea HOM05D003893 ORTHO05D005167 3.0e-290 1003.0 1930 36.2
Sed0003705 Sechium edule HOM05D003893 ORTHO05D005167 8.1e-288 995.0 1933 35.3
FAN18G3472 Fragaria x ananassa HOM05D003893 ORTHO05D005167 3.1e-287 993.0 1921 34.9
BcaNung00076 Brassica carinata HOM05D003893 ORTHO05D005167 7.9e-283 978.4 1925 34.9
FAN08G3381 Fragaria x ananassa HOM05D003893 ORTHO05D005167 2.3e-282 976.9 1919 34.4
Ca_22016_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 3.9e-282 976.1 1966 34.0
Gohir.A12G212800 Gossypium hirsutum HOM05D003893 ORTHO05D005167 4.0e-279 966.1 1896 34.7
Cc08_g11340 Coffea canephora HOM05D003893 ORTHO05D005167 1.7e-277 960.7 1925 34.3
EL10Ac5g12271 Beta vulgaris HOM05D003893 ORTHO05D005167 7.9e-275 951.8 1911 34.4
Lsat_1_v5_gn_6_67000 Lactuca sativa HOM05D003893 ORTHO05D005167 7.4e-273 945.3 1936 34.0
Rhsim11G0002100 Rhododendron simsii HOM05D003893 ORTHO05D005167 2.4e-263 913.7 1843 35.0
AUR62018840 Chenopodium quinoa HOM05D003893 ORTHO05D005167 6.9e-263 912.1 1828 33.4
COL.COLO4_07201 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.2e-261 907.1 1926 33.4
Lj8C277G4 Lonicera japonica HOM05D003893 ORTHO05D005167 6.1e-259 899.0 1998 32.8
Eucgr.E00353 Eucalyptus grandis HOM05D003893 ORTHO05D005167 4.1e-255 886.3 1936 33.0
Duzib205G1731 Durio zibethinus HOM05D003893 ORTHO05D005167 2.1e-251 874.0 1921 33.5
SGA_v2.0_scaffold20G09254 Striga asiatica HOM05D003893 ORTHO05D005167 1.6e-238 831.2 1942 31.2
Oeu054285.1 Olea europaea HOM05D003893 ORTHO05D005167 1.7e-232 811.2 1578 34.4
Actinidia25908 Actinidia chinensis HOM05D003893 ORTHO05D005167 8.5e-229 798.9 1586 33.7
Sabra01G0120900 Salix brachista HOM05D003893 ORTHO05D005167 9.4e-220 768.8 1697 32.3
TPR.G25755 Trifolium pratense HOM05D003893 ORTHO05D005167 4.4e-217 760.0 1504 33.2
GSVIVG01003688001 Vitis vinifera HOM05D003893 ORTHO05D005167 2.1e-211 741.1 1156 37.9
Psat4g076000 Pisum sativum HOM05D003893 ORTHO05D005167 1.8e-210 738.0 1492 32.6
ATR0665G346 Amborella trichopoda HOM05D003893 ORTHO05D005167 9.8e-209 732.3 1005 42.1
ClCG10G002230 Citrullus lanatus HOM05D003893 ORTHO05D005167 9.2e-191 672.5 1108 38.7
Hund14479 Selenicereus undatus HOM05D003893 ORTHO05D005167 2.1e-187 661.4 1487 31.8
SalBow1G5499 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.5e-177 628.6 1052 37.5
unitig_21.g20369 Utricularia gibba HOM05D003893 ORTHO05D005167 1.5e-169 602.1 1532 30.0
SalBow1G1311 Salvia bowleyana HOM05D003893 ORTHO05D005167 2.7e-166 591.3 829 40.5
Nitab4.5_0000500g0300 Nicotiana tabacum HOM05D003893 ORTHO05D005167 6.7e-165 586.6 1444 30.3
CiPaw.11G072600 Carya illinoinensis HOM05D003893 ORTHO05D005167 9.0e-162 576.2 983 36.3
AUR62007166 Chenopodium quinoa HOM05D003893 ORTHO05D005167 4.1e-146 524.2 1812 26.0
vmacro17755 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 3.8e-144 517.7 1279 31.8
Hma1.2p1_0840F.1_g226640 Hydrangea macrophylla HOM05D003893 ORTHO05D005167 1.4e-143 515.8 779 39.4
BcaNung07386 Brassica carinata HOM05D003893 ORTHO05D005167 1.3e-128 466.1 774 37.9
Ca_30504_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 1.1e-122 446.4 909 33.4
QL01p036487 Quercus lobata HOM05D003893 ORTHO05D005167 2.0e-121 442.2 545 45.3
TPR.G17142 Trifolium pratense HOM05D003893 ORTHO05D005167 8.6e-96 357.1 428 47.0
Psat4g075840 Pisum sativum HOM05D003893 ORTHO05D005167 1.2e-94 353.2 430 46.5
CBR_g21115 Chara braunii HOM05D003893 ORTHO05D005167 2.3e-85 322.4 392 47.4
Nitab4.5_0000500g0310 Nicotiana tabacum HOM05D003893 ORTHO05D005167 5.2e-85 321.2 435 41.6
CBR_g21120 Chara braunii HOM05D003893 ORTHO05D005167 5.4e-82 311.2 965 29.5
SEGI_27963 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 5.8e-76 291.2 515 35.5
VMungo0251G0173 Vigna mungo HOM05D003893 ORTHO05D005167 5.8e-76 291.2 426 41.1
vmacro17756 Vaccinium macrocarpon HOM05D003893 ORTHO05D005167 4.9e-75 288.1 446 40.1
Haze_08369 Corylus avellana HOM05D003893 ORTHO05D005167 1.1e-74 287.0 328 48.8
Cre01.g027350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 1.4e-74 286.6 872 27.6
Nitab4.5_0009451g0060 Nicotiana tabacum HOM05D003893 ORTHO05D005167 2.4e-74 285.8 361 44.3
Haze_08368 Corylus avellana HOM05D003893 ORTHO05D005167 8.9e-69 267.3 483 35.0
Ah.07g199160 Amaranthus hybridus HOM05D003893 ORTHO05D005167 2.0e-68 266.2 655 29.9
Ca_30503_v3 Cicer arietinum L. HOM05D003893 ORTHO05D005167 3.8e-67 261.9 305 49.2
Cpa.g.sc2698.1 Carica papaya HOM05D003893 ORTHO05D005167 5.6e-63 248.1 176 68.2
VMungo0251G3747 Vigna mungo HOM05D003893 ORTHO05D005167 2.1e-62 246.1 1551 22.4
SMO364G0317 Selaginella moellendorffii HOM05D003893 ORTHO05D005167 4.7e-62 245.0 175 68.6
CDE12G0047 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 3.1e-61 242.3 553 30.7
ClCG10G002220 Citrullus lanatus HOM05D003893 ORTHO05D005167 4.0e-61 241.9 599 30.9
CDE12G0573 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 9.0e-61 240.7 176 64.2
Os03g0100500 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 7.1e-58 231.1 216 57.4
MCO01G306 Micromonas commoda HOM05D003893 ORTHO05D005167 2.8e-54 219.2 658 29.5
Hund14480 Selenicereus undatus HOM05D003893 ORTHO05D005167 3.6e-54 218.8 336 38.7
SalBow1G6370 Salvia bowleyana HOM05D003893 ORTHO05D005167 1.4e-53 216.9 595 29.2
CBR_g21119 Chara braunii HOM05D000019 ORTHO05D005167 1.8e-53 216.5 215 54.4
ATR0665G055 Amborella trichopoda HOM05D003893 ORTHO05D005167 4.2e-50 205.3 502 30.7
PRCOL_00006953 Prasinoderma coloniale HOM05D003893 ORTHO05D005167 3.5e-49 202.2 808 26.1
Nitab4.5_0009451g0070 Nicotiana tabacum HOM05D003893 ORTHO05D005167 1.1e-47 197.2 279 39.1
Haze_08366 Corylus avellana HOM05D003893 ORTHO05D005167 5.6e-39 168.3 217 41.0
VMungo0251G2254 Vigna mungo HOM05D003893 ORTHO05D005167 1.3e-38 167.2 104 71.2
SalBow1G0831 Salvia bowleyana HOM05D003893 ORTHO05D005167 4.8e-38 165.2 495 28.3
Rhsim11G0002000 Rhododendron simsii HOM05D003893 ORTHO05D005167 1.7e-35 156.8 110 65.5
Cre15.g637350 Chlamydomonas reinhardtii HOM05D003893 ORTHO05D005167 6.7e-32 144.8 151 47.0
Haze_08365 Corylus avellana HOM05D003893 ORTHO05D005167 3.3e-31 142.5 395 27.8
VMungo0251G2570 Vigna mungo HOM05D003893 ORTHO05D005167 3.3e-31 142.5 151 47.7
SEGI_19363 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 5.0e-27 128.6 130 50.0
COL.COLO4_22133 Corchorus olitorius HOM05D003893 ORTHO05D005167 2.5e-26 126.3 518 24.7
arahy.Tifrunner.gnm1.ann1.NA56E9 Arachis hypogaea HOM05D003893 ORTHO05D005167 1.6e-25 123.6 139 43.2
CDE12G0397 Ceratophyllum demersum HOM05D003893 ORTHO05D005167 4.3e-23 115.5 136 44.1
Haze_08367 Corylus avellana HOM05D003893 ORTHO05D005167 5.3e-21 108.6 314 30.9
Psat7g156960 Pisum sativum HOM05D003893 ORTHO05D005167 3.8e-19 102.4 359 26.5
Os10g0142900 Oryza sativa ssp. japonica HOM05D003893 ORTHO05D005167 2.1e-17 96.7 188 33.0
COL.COLO4_04209 Corchorus olitorius HOM05D003893 ORTHO05D005167 1.8e-16 93.6 211 33.2
SEGI_09425 Sequoiadendron giganteum HOM05D003893 ORTHO05D005167 3.0e-16 92.8 179 36.9
Ah.07g199170 Amaranthus hybridus HOM05D003893 ORTHO05D005167 5.1e-16 92.0 54 77.8
Nitab4.5_0026472g0010 Nicotiana tabacum HOM05D003893 ORTHO05D005167 8.8e-16 91.3 402 25.1
Gohir.D02G139050 Gossypium hirsutum HOM05D003893 ORTHO05D005167 1.3e-14 87.4 81 48.1
arahy.Tifrunner.gnm1.ann1.LQQ75E Arachis hypogaea HOM05D003893 ORTHO05D005167 2.8e-14 86.3 85 48.2
arahy.Tifrunner.gnm1.ann1.MLK8WM Arachis hypogaea HOM05D003893 ORTHO05D005167 3.7e-14 85.9 85 49.4
COL.COLO4_04210 Corchorus olitorius HOM05D003893 ORTHO05D005167 3.7e-14 85.9 125 40.8
Gorai.005G158100 Gossypium raimondii HOM05D003893 ORTHO05D005167 3.7e-14 85.9 81 48.1
Gohir.D11G202680 Gossypium hirsutum HOM05D003893 ORTHO05D005167 6.3e-14 85.1 81 46.9
Migut.E01263 Erythranthe guttata HOM05D003893 ORTHO05D005167 1.1e-13 84.3 385 23.1
arahy.Tifrunner.gnm1.ann1.L0U5DT Arachis hypogaea HOM05D003893 ORTHO05D005167 1.8e-13 83.6 141 33.3
Cpa.g.sc98.30 Carica papaya HOM05D003893 ORTHO05D005167 1.7e-11 77.0 128 39.8
arahy.Tifrunner.gnm1.ann1.FKEW18 Arachis hypogaea HOM05D003893 ORTHO05D005167 5.0e-11 75.5 143 32.9
Gohir.A11G196650 Gossypium hirsutum HOM05D003893 ORTHO05D005167 3.2e-10 72.8 81 42.0
arahy.Tifrunner.gnm1.ann1.9S00H1 Arachis hypogaea HOM05D003893 ORTHO05D005167 5.5e-10 72.0 71 46.5
Cre03.g169700 Chlamydomonas reinhardtii HOM05D006539 ORTHO05D008694 1.0e-08 67.8 171 23.4


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