Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 5.5e-121 437.6 209 100.0
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 8.5e-98 360.5 206 80.6
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.7e-96 355.5 208 79.3
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 3.7e-93 345.1 209 75.6
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 4.5e-91 338.2 209 74.6
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 5.9e-91 337.8 209 73.2
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 5.9e-91 337.8 205 75.6
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 1.0e-90 337.0 209 74.6
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 2.9e-90 335.5 209 74.6
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 3.8e-90 335.1 209 74.2
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 5.0e-90 334.7 209 74.2
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 6.5e-90 334.3 209 74.6
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 8.5e-90 334.0 209 72.7
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 1.1e-89 333.6 209 72.2
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 1.5e-89 333.2 209 75.1
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.5e-89 333.2 208 73.6
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.2e-89 332.0 209 73.7
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 4.2e-89 331.6 206 74.8
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 5.5e-89 331.3 209 73.2
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 7.2e-89 330.9 209 73.2
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 7.2e-89 330.9 209 72.2
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 9.4e-89 330.5 209 72.7
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 9.4e-89 330.5 209 71.8
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 9.4e-89 330.5 209 72.7
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 1.6e-88 329.7 209 72.2
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 1.6e-88 329.7 209 71.8
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 2.7e-88 328.9 209 72.2
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 2.7e-88 328.9 209 72.7
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 4.7e-88 328.2 209 72.2
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 4.7e-88 328.2 209 73.7
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 4.7e-88 328.2 209 72.2
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 6.1e-88 327.8 209 72.7
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 6.1e-88 327.8 208 73.6
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 6.1e-88 327.8 209 72.7
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 6.1e-88 327.8 209 74.2
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.4e-87 326.6 209 72.7
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.4e-87 326.6 209 72.7
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 1.4e-87 326.6 209 73.7
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 1.8e-87 326.2 209 70.8
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 1.8e-87 326.2 209 71.8
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 3.0e-87 325.5 209 72.2
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 3.0e-87 325.5 209 71.8
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 3.0e-87 325.5 209 71.8
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 4.0e-87 325.1 209 71.8
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 4.0e-87 325.1 209 72.7
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 4.0e-87 325.1 209 71.8
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 5.2e-87 324.7 209 71.8
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 5.2e-87 324.7 209 71.3
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 5.2e-87 324.7 209 72.2
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 5.2e-87 324.7 209 72.2
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 6.8e-87 324.3 209 73.2
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 6.8e-87 324.3 209 71.3
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 8.8e-87 323.9 209 71.8
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 8.8e-87 323.9 221 70.1
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 1.2e-86 323.6 209 72.2
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 1.5e-86 323.2 209 72.2
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 1.5e-86 323.2 209 72.2
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 2.0e-86 322.8 209 71.3
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 2.0e-86 322.8 209 71.8
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 2.6e-86 322.4 209 71.8
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 2.6e-86 322.4 209 70.8
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 2.6e-86 322.4 209 73.2
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 4.4e-86 321.6 209 73.2
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 9.8e-86 320.5 209 71.8
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 9.8e-86 320.5 209 71.8
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 9.8e-86 320.5 207 72.9
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.7e-85 319.7 209 72.7
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 2.2e-85 319.3 209 71.3
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 2.8e-85 318.9 209 70.8
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 2.8e-85 318.9 209 70.3
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.8e-85 318.9 230 67.8
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.7e-85 318.5 209 70.8
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 3.7e-85 318.5 209 69.4
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 4.8e-85 318.2 209 70.3
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 6.3e-85 317.8 209 71.3
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 1.1e-84 317.0 209 69.9
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 1.4e-84 316.6 209 69.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 1.8e-84 316.2 210 71.0
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 2.4e-84 315.8 230 67.0
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 3.1e-84 315.5 209 69.9
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 3.1e-84 315.5 209 68.4
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 4.1e-84 315.1 209 69.9
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 4.1e-84 315.1 209 69.9
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 9.1e-84 313.9 209 70.8
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 1.2e-83 313.5 209 68.9
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.6e-83 313.2 240 64.6
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 4.5e-83 311.6 209 70.3
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.0e-82 310.5 209 69.4
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.3e-82 309.3 209 68.4
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 2.3e-82 309.3 225 66.7
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.9e-82 308.9 209 68.9
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 7.2e-81 304.3 243 60.9
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 9.8e-78 293.9 190 71.6
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 4.9e-77 291.6 196 70.4
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 4.9e-77 291.6 191 71.2
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 4.9e-77 291.6 187 72.7
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 6.3e-77 291.2 190 70.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.4e-76 289.3 187 72.7
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 4.1e-76 288.5 189 69.8
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 7.0e-76 287.7 193 69.9
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 4.5e-75 285.0 187 71.7
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 1.0e-74 283.9 185 71.9
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.1e-72 276.2 203 64.5
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 1.0e-71 273.9 288 50.3
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 5.2e-71 271.6 168 75.6
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.0e-70 269.6 209 62.7
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 2.2e-69 266.2 205 62.4
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 3.2e-68 262.3 165 72.1
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 3.6e-64 248.8 187 65.2
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 8.0e-64 247.7 150 74.7
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 5.2e-63 245.0 165 68.5
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 2.7e-59 232.6 179 61.5
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 8.3e-53 211.1 210 50.5
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.9e-52 209.9 212 50.0
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 2.4e-52 209.5 209 52.6
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.1e-51 206.5 135 71.9
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 6.2e-40 168.3 207 44.9
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 8.1e-40 167.9 209 40.7
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.4e-39 167.2 168 49.4
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.8e-39 166.8 192 47.9
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 4.8e-32 142.1 144 52.1
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 6.2e-32 141.7 224 35.7
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 4.5e-30 135.6 151 49.0
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.6e-24 117.1 84 65.5
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.1e-24 116.7 74 70.3
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 1.1e-23 114.4 137 44.5
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 2.4e-23 113.2 84 64.3
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.3e-18 96.7 95 56.8
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 4.5e-14 82.4 42 83.3


User provided reference genes

Program Settings