Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 3.4e-186 654.8 327 100.0
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 3.5e-66 256.1 287 46.7
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 2.0e-61 240.4 288 45.8
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 7.1e-59 231.9 291 41.9
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 3.3e-56 223.0 299 42.8
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 1.6e-55 220.7 254 44.9
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 1.1e-51 208.0 285 40.0
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.9e-51 207.2 295 43.4
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 2.5e-51 206.8 282 41.1
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 2.5e-51 206.8 291 44.0
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 4.2e-51 206.1 281 41.6
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 4.2e-51 206.1 290 41.0
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 5.5e-51 205.7 290 40.7
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 7.2e-51 205.3 302 40.4
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 1.6e-50 204.1 281 42.0
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 1.6e-50 204.1 290 39.0
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 2.7e-50 203.4 284 40.8
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 2.7e-50 203.4 296 40.9
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.0e-49 201.4 285 39.6
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 1.4e-49 201.1 286 39.5
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.4e-49 201.1 295 42.4
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 1.8e-49 200.7 282 39.7
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 1.8e-49 200.7 288 39.6
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 1.8e-49 200.7 293 40.6
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 2.3e-49 200.3 286 39.5
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 2.3e-49 200.3 279 41.2
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 3.0e-49 199.9 280 41.1
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 6.7e-49 198.7 297 39.1
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 8.8e-49 198.4 288 38.9
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 1.1e-48 198.0 297 38.4
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 1.1e-48 198.0 295 42.4
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 2.5e-48 196.8 299 39.8
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 2.5e-48 196.8 300 38.3
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 3.3e-48 196.4 286 40.2
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 3.3e-48 196.4 282 37.6
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 5.7e-48 195.7 298 38.6
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 7.4e-48 195.3 304 41.1
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 7.4e-48 195.3 281 42.0
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 9.7e-48 194.9 298 40.3
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 9.7e-48 194.9 284 40.1
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 9.7e-48 194.9 292 40.1
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 1.3e-47 194.5 294 39.1
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 2.2e-47 193.7 313 39.3
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 2.8e-47 193.4 282 40.4
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 3.7e-47 193.0 294 39.1
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 8.2e-47 191.8 264 40.5
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 1.1e-46 191.4 276 40.6
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 1.1e-46 191.4 288 39.2
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 1.1e-46 191.4 294 38.4
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 1.4e-46 191.0 323 36.8
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 1.8e-46 190.7 286 38.5
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 1.8e-46 190.7 301 39.2
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 2.4e-46 190.3 289 38.8
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 2.4e-46 190.3 283 40.3
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.4e-46 190.3 281 38.1
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 3.1e-46 189.9 281 39.5
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 4.1e-46 189.5 284 39.8
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 5.3e-46 189.1 288 40.3
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 5.3e-46 189.1 284 39.1
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 6.9e-46 188.7 284 40.1
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 6.9e-46 188.7 317 38.8
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 9.1e-46 188.3 304 37.8
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 9.1e-46 188.3 290 38.6
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 9.1e-46 188.3 310 38.4
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 9.1e-46 188.3 281 37.4
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 1.2e-45 188.0 315 36.5
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 2.0e-45 187.2 305 36.7
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 2.0e-45 187.2 310 38.4
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 2.6e-45 186.8 296 41.2
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 3.4e-45 186.4 304 36.8
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 3.4e-45 186.4 289 39.4
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.5e-45 186.0 292 39.7
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 1.0e-44 184.9 289 39.1
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 1.3e-44 184.5 302 36.4
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 1.3e-44 184.5 292 39.4
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 1.7e-44 184.1 289 39.1
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 1.7e-44 184.1 283 39.9
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.7e-44 184.1 292 39.4
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 2.2e-44 183.7 284 39.4
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 2.9e-44 183.3 291 38.5
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 2.9e-44 183.3 301 39.2
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 2.9e-44 183.3 256 41.8
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 2.9e-44 183.3 290 39.0
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.8e-44 183.0 292 38.4
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 5.0e-44 182.6 297 37.0
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 5.0e-44 182.6 345 34.8
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 5.0e-44 182.6 280 38.2
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 6.5e-44 182.2 294 38.4
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 8.5e-44 181.8 291 38.8
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.1e-43 181.4 292 39.0
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 2.5e-43 180.3 285 40.0
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 3.2e-43 179.9 286 38.1
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 5.5e-43 179.1 290 37.6
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 1.2e-42 177.9 287 38.0
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 1.6e-42 177.6 277 40.4
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 2.7e-42 176.8 291 39.2
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 1.0e-41 174.9 297 39.4
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 1.0e-41 174.9 297 39.4
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.8e-41 174.1 291 38.5
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.8e-41 174.1 291 38.5
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 2.3e-41 173.7 306 35.9
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 3.0e-41 173.3 295 37.3
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 6.7e-41 172.2 291 38.1
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 8.8e-41 171.8 241 42.3
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 1.1e-40 171.4 308 38.3
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 1.1e-40 171.4 284 38.7
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 1.1e-40 171.4 241 41.9
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 2.0e-40 170.6 241 41.9
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 2.0e-40 170.6 303 36.6
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 3.3e-40 169.9 297 36.0
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 4.4e-40 169.5 235 42.6
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 4.4e-40 169.5 235 42.6
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 3.7e-39 166.4 259 38.6
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 3.7e-39 166.4 296 35.8
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 2.4e-38 163.7 271 36.9
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 7.7e-37 158.7 213 41.3
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 2.9e-36 156.8 366 30.1
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 8.5e-36 155.2 235 39.6
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 1.5e-35 154.5 281 35.6
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 3.2e-35 153.3 290 33.8
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 1.0e-33 148.3 220 40.9
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 2.3e-33 147.1 288 34.4
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 1.1e-32 144.8 275 35.3
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 3.7e-31 139.8 220 39.1
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 2.1e-26 124.0 227 36.1
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 8.8e-25 118.6 126 42.9
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 2.6e-24 117.1 138 42.0
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 3.4e-24 116.7 224 35.3
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.8e-23 113.6 121 44.6
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 4.8e-23 112.8 165 38.8
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.8e-20 103.2 98 44.9
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 2.5e-19 100.5 172 35.5
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 7.2e-19 99.0 80 53.8
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.6e-18 97.8 169 36.7
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.4e-17 94.7 102 42.2
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 5.2e-17 92.8 328 28.0
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 8.8e-17 92.0 69 58.0
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 3.1e-14 83.6 152 38.8
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 4.1e-14 83.2 59 57.6
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 5.9e-13 79.3 171 33.3
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.8e-12 76.6 182 32.4
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 8.6e-12 75.5 64 51.6
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 8.6e-12 75.5 222 28.4
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 8.0e-10 68.9 141 34.0


User provided reference genes

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