Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 0.0e+00 2040.0 1303 100.0
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 1.1e-224 784.6 1314 43.8
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 2.6e-192 677.2 1250 42.2
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 1.7e-148 531.6 1247 39.6
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 2.4e-137 494.6 879 43.9
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 4.5e-120 437.2 1394 36.2
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 8.2e-74 283.5 855 35.8
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 2.3e-68 265.4 889 28.6
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 3.0e-68 265.0 633 38.9
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 5.4e-65 254.2 756 34.8
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 7.0e-65 253.8 1314 26.8
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 1.6e-64 252.7 1332 26.9
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 2.0e-64 252.3 1505 28.0
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 5.9e-64 250.8 807 35.8
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 1.3e-63 249.6 1498 28.6
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 5.0e-63 247.7 1338 26.2
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 1.1e-62 246.5 625 39.0
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.9e-62 245.7 796 34.0
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 1.9e-62 245.7 823 34.9
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 4.2e-62 244.6 872 28.0
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 4.2e-62 244.6 1456 28.3
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 4.2e-62 244.6 1497 27.4
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 7.2e-62 243.8 717 34.7
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 9.5e-62 243.4 1437 27.3
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 1.2e-61 243.0 734 35.4
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 1.2e-61 243.0 770 33.1
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 2.8e-61 241.9 633 36.0
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 2.8e-61 241.9 1465 26.5
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.0e-60 240.0 295 45.4
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 5.2e-60 237.7 719 34.9
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 5.2e-60 237.7 738 35.6
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 5.2e-60 237.7 773 33.1
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 6.8e-60 237.3 1444 28.7
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 2.6e-59 235.3 1443 25.7
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 9.8e-59 233.4 796 33.8
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 9.8e-59 233.4 1371 26.3
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 3.7e-58 231.5 1533 26.6
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 3.7e-58 231.5 1460 25.7
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 4.9e-58 231.1 1478 25.8
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.8e-57 229.2 1280 27.7
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 1.8e-57 229.2 1425 29.1
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 5.4e-57 227.6 1505 26.0
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 7.0e-57 227.3 1232 26.5
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 9.2e-57 226.9 777 32.7
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 9.2e-57 226.9 1456 28.7
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 2.7e-56 225.3 754 33.8
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 4.5e-56 224.6 1522 25.4
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 7.8e-56 223.8 1498 25.4
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 1.0e-55 223.4 1443 25.9
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 1.0e-55 223.4 1522 28.3
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 2.3e-55 222.2 901 28.0
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 3.9e-55 221.5 764 34.3
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 6.6e-55 220.7 778 32.5
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 4.3e-54 218.0 794 33.5
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 5.6e-54 217.6 1089 28.7
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 9.5e-54 216.9 1557 25.2
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 2.1e-53 215.7 1519 27.8
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 2.8e-53 215.3 1490 26.1
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 3.6e-53 214.9 1455 28.4
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 6.1e-53 214.2 1494 25.4
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 8.0e-53 213.8 1456 25.4
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 1.0e-52 213.4 1472 25.5
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 1.4e-52 213.0 806 32.6
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 1.8e-52 212.6 1526 25.8
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 2.3e-52 212.2 1547 25.1
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 5.2e-52 211.1 1152 27.5
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 6.8e-52 210.7 913 26.7
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 5.8e-51 207.6 1275 28.3
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 5.8e-51 207.6 1444 24.9
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 7.5e-51 207.2 1244 26.1
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 9.8e-51 206.8 1506 25.6
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 1.3e-50 206.5 1478 25.8
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 1.7e-50 206.1 1464 25.1
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 2.2e-50 205.7 1154 27.6
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 2.9e-50 205.3 1507 25.8
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 4.9e-50 204.5 1154 27.5
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 8.3e-50 203.8 1471 26.0
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 1.1e-49 203.4 834 32.6
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 3.2e-49 201.8 1348 27.2
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 3.2e-49 201.8 1348 27.2
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 3.2e-49 201.8 1286 27.8
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 1.6e-48 199.5 1361 25.9
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 1.6e-48 199.5 1610 25.0
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 3.5e-48 198.4 1545 25.0
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 6.0e-48 197.6 1277 28.4
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 6.0e-48 197.6 1509 25.5
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 1.0e-47 196.8 1030 27.1
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 1.0e-47 196.8 456 33.1
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 1.3e-47 196.4 1476 26.6
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.7e-47 196.1 1539 25.5
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 2.3e-47 195.7 1388 28.5
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 3.0e-47 195.3 1474 28.3
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 3.9e-47 194.9 979 25.4
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 5.0e-47 194.5 1168 27.7
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 6.6e-47 194.1 1269 27.6
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 8.6e-47 193.7 1339 24.5
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 2.1e-45 189.1 991 27.6
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 4.7e-45 188.0 1474 26.0
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 8.9e-44 183.7 1503 26.7
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 3.4e-43 181.8 1455 25.6
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 8.3e-42 177.2 1472 28.1
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 1.9e-41 176.0 1462 26.9
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 6.0e-40 171.0 975 26.1
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 1.0e-39 170.2 1576 24.4
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 1.3e-39 169.9 999 22.1
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 3.6e-37 161.8 840 32.3
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 1.1e-36 160.2 1431 24.6
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 1.4e-36 159.8 1464 25.3
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 8.3e-34 150.6 344 34.9
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 9.2e-33 147.1 688 30.7
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 4.3e-30 138.3 1480 24.4
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 1.6e-29 136.3 627 30.9
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 1.2e-27 130.2 800 30.6
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 5.1e-23 114.8 119 47.9
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 4.4e-19 101.7 342 30.7
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.3e-18 100.1 638 31.3
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 5.4e-17 94.7 555 23.1
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 7.1e-17 94.4 226 31.9
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 5.1e-15 88.2 94 50.0
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 4.3e-14 85.1 117 39.3
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 9.6e-14 84.0 76 52.6
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 5.3e-12 78.2 129 35.7
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.2e-11 77.0 109 39.4
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 2.0e-11 76.3 551 22.0
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 2.6e-11 75.9 88 47.7
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 3.4e-11 75.5 378 25.7
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 1.3e-10 73.6 376 27.7
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 3.8e-10 72.0 107 43.0
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 3.8e-10 72.0 54 57.4
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 4.6e-08 65.1 69 52.2
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 1.8e-07 63.2 50 52.0
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 4.3e-06 58.5 51 51.0


User provided reference genes

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