Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.4e-75 285.4 144 100.0
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 6.0e-34 147.9 141 53.9
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.1e-30 137.1 134 56.0
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 6.8e-30 134.4 145 51.0
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 1.9e-27 126.3 139 48.9
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 4.1e-27 125.2 142 45.1
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 1.3e-25 120.2 137 47.4
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 8.7e-25 117.5 129 50.4
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 3.3e-24 115.5 135 48.1
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 5.6e-24 114.8 129 48.8
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 7.3e-24 114.4 153 43.8
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 9.6e-24 114.0 134 49.3
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 2.1e-23 112.8 134 45.5
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 2.1e-23 112.8 133 47.4
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 2.1e-23 112.8 137 45.3
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 2.8e-23 112.5 138 47.8
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 4.7e-23 111.7 139 48.2
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 6.2e-23 111.3 134 44.0
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 8.1e-23 110.9 130 48.5
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 8.1e-23 110.9 133 48.1
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 8.1e-23 110.9 137 46.7
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 1.4e-22 110.2 162 40.7
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 2.4e-22 109.4 138 47.1
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 2.4e-22 109.4 138 44.9
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 2.4e-22 109.4 156 42.3
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 3.1e-22 109.0 160 42.5
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 3.1e-22 109.0 133 48.1
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 4.0e-22 108.6 130 45.4
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 6.9e-22 107.8 132 44.7
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 9.0e-22 107.5 129 44.2
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 9.0e-22 107.5 136 47.1
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 9.0e-22 107.5 136 45.6
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 1.2e-21 107.1 161 41.0
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.5e-21 106.7 137 47.4
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.5e-21 106.7 139 47.5
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 1.5e-21 106.7 130 46.9
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 2.0e-21 106.3 130 48.5
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.4e-21 105.5 136 45.6
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 4.4e-21 105.1 150 44.7
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 4.4e-21 105.1 132 45.5
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 5.8e-21 104.8 160 40.6
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 5.8e-21 104.8 142 45.1
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 7.6e-21 104.4 151 45.0
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 7.6e-21 104.4 132 47.7
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 9.9e-21 104.0 145 43.4
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 1.7e-20 103.2 135 45.9
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 2.9e-20 102.4 129 45.7
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 3.8e-20 102.1 165 40.0
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 8.4e-20 100.9 110 50.9
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 8.4e-20 100.9 143 43.4
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 8.4e-20 100.9 134 40.3
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.1e-19 100.5 139 43.9
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 1.9e-19 99.8 139 44.6
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 2.4e-19 99.4 143 42.7
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 2.4e-19 99.4 136 42.6
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 3.2e-19 99.0 190 34.2
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 3.2e-19 99.0 145 40.7
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 4.2e-19 98.6 134 44.0
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 5.4e-19 98.2 135 43.7
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 7.1e-19 97.8 159 39.6
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.2e-18 97.1 153 37.3
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 2.1e-18 96.3 146 41.1
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 2.1e-18 96.3 167 37.7
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 3.5e-18 95.5 162 38.3
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 4.6e-18 95.1 154 41.6
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 6.0e-18 94.7 171 39.8
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.3e-17 93.6 153 40.5
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 1.3e-17 93.6 135 37.8
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 3.9e-17 92.0 171 38.0
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 8.7e-17 90.9 168 39.9
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 8.7e-17 90.9 149 39.6
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.1e-16 90.5 163 38.0
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 1.5e-16 90.1 132 39.4
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 3.3e-16 89.0 166 37.3
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 9.6e-16 87.4 173 32.9
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.6e-15 86.7 137 38.0
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 2.8e-15 85.9 163 39.3
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 8.1e-15 84.3 136 40.4
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 1.1e-14 84.0 135 40.7
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.8e-14 83.2 168 36.3
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 5.3e-14 81.6 153 34.6
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 2.6e-13 79.3 163 35.0
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 2.6e-13 79.3 162 35.2
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 2.6e-13 79.3 131 39.7
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 4.9e-12 75.1 38 81.6
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 8.4e-12 74.3 194 30.9
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 1.9e-11 73.2 62 54.8
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 2.1e-10 69.7 83 49.4
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 2.1e-10 69.7 83 49.4
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 4.6e-10 68.6 198 30.3
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 7.9e-10 67.8 122 35.2
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 1.3e-09 67.0 192 30.2
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 1.8e-09 66.6 163 33.7
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 2.3e-09 66.2 44 63.6
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 2.3e-09 66.2 134 34.3
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 3.9e-09 65.5 44 63.6
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 6.7e-09 64.7 198 28.8
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 8.7e-09 64.3 53 62.3
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 2.8e-07 59.3 97 41.2
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.1e-06 57.4 70 44.3
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 1.8e-06 56.6 56 53.6
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 3.1e-06 55.8 110 39.1
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 6.9e-06 54.7 52 48.1


User provided reference genes

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