Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0092s0003 Marchantia polymorpha HOM05D001200 ORTHO05D002731 1.4e-119 433.0 217 100.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 9.9e-41 171.0 319 38.6
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 3.8e-40 169.1 299 39.1
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 3.2e-39 166.0 354 37.6
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 4.6e-38 162.2 322 38.5
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 1.8e-37 160.2 348 37.4
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.8e-37 160.2 348 37.4
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-37 159.5 243 45.7
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-37 159.5 243 45.7
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 8.7e-37 157.9 349 35.2
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 8.7e-37 157.9 349 35.2
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 8.7e-37 157.9 349 35.2
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 8.7e-37 157.9 349 35.2
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.5e-36 157.1 348 36.2
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 3.3e-36 156.0 227 45.8
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 3.3e-36 156.0 227 45.8
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 3.3e-36 156.0 348 35.9
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 4.3e-36 155.6 227 45.8
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 4.3e-36 155.6 227 45.8
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 4.3e-36 155.6 227 45.8
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 4.3e-36 155.6 227 45.8
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 4.3e-36 155.6 349 36.1
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 5.6e-36 155.2 228 46.5
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-35 153.3 244 41.8
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 4.8e-35 152.1 229 45.4
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.4e-34 150.6 227 45.4
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 1.8e-34 150.2 228 44.7
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 5.3e-34 148.7 199 45.2
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 6.9e-34 148.3 178 51.1
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 6.9e-34 148.3 227 44.1
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 2.0e-33 146.7 227 44.1
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.7e-32 143.7 271 38.0
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.1e-31 141.0 278 37.1
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 5.5e-31 138.7 277 36.8
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.5e-30 136.0 243 41.6
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.0e-30 135.2 156 50.6
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.0e-30 135.2 156 50.6
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.0e-30 135.2 156 50.6
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.0e-30 135.2 156 50.6
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 5.1e-29 132.1 270 37.4
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 1.9e-28 130.2 177 46.3
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 2.8e-27 126.3 216 44.0
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 4.5e-25 119.0 315 33.0
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.3e-24 117.5 206 41.7
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 5.0e-24 115.5 195 43.1
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.1e-23 114.4 201 40.8
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 2.5e-23 113.2 205 43.9
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 5.5e-23 112.1 138 50.0
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 5.1e-21 105.5 202 41.1
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 1.5e-20 104.0 119 52.1
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 1.3e-19 100.9 219 36.1
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.8e-18 97.1 191 39.3
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.8e-18 97.1 191 39.3
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 2.4e-18 96.7 202 35.1
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 5.3e-18 95.5 158 42.4
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 1.2e-17 94.4 223 36.3
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 1.5e-17 94.0 179 39.7
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 2.0e-17 93.6 111 49.5
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 2.9e-16 89.7 136 45.6
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 6.5e-16 88.6 120 44.2
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 8.5e-16 88.2 139 43.2
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 8.5e-16 88.2 190 37.4
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 1.4e-15 87.4 141 44.0
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-15 87.4 106 50.9
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.9e-15 87.0 130 45.4
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 2.5e-15 86.7 137 45.3
Lalb_Chr13g0292801 Lupinus albus HOM05D001200 ORTHO05D002731 3.2e-15 86.3 69 65.2
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 4.2e-15 85.9 141 41.8
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 4.2e-15 85.9 152 38.2
MBI10_g47593_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 4.2e-15 85.9 152 38.2
Medtr5g032430 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-14 83.6 112 48.2
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 2.7e-14 83.2 48 79.2
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 2.7e-14 83.2 48 79.2
BolC7t43854H Brassica oleracea HOM05D001200 ORTHO05D002731 3.6e-14 82.8 89 55.1
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 6.1e-14 82.0 130 42.3
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 1.0e-13 81.3 189 37.6
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.0e-13 81.3 48 75.0
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.4e-13 80.9 134 44.0
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 3.9e-13 79.3 87 52.9
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 3.9e-13 79.3 132 41.7
Lsat_1_v5_gn_1_14200 Lactuca sativa HOM05D001200 ORTHO05D002731 1.5e-12 77.4 85 52.9
Medtr5g094180 Medicago truncatula HOM05D001200 ORTHO05D002731 1.5e-12 77.4 89 50.6
Oeu022126.1 Olea europaea HOM05D001200 ORTHO05D002731 1.5e-12 77.4 63 63.5
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 2.6e-12 76.6 133 40.6
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 7.4e-12 75.1 124 43.5
Medtr4g086110 Medicago truncatula HOM05D001200 ORTHO05D002731 7.4e-12 75.1 120 43.3
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 7.4e-12 75.1 136 42.6
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 1.7e-11 73.9 89 47.2
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 1.4e-10 70.9 127 37.8
arahy.Tifrunner.gnm1.ann1.FIPJ9G Arachis hypogaea HOM05D001200 ORTHO05D002731 1.8e-10 70.5 82 51.2
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 2.4e-10 70.1 82 48.8
Medtr7g112630 Medicago truncatula HOM05D001200 ORTHO05D002731 2.4e-10 70.1 87 48.3
Hund03917 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.4e-10 70.1 78 56.4
Medtr5g021300 Medicago truncatula HOM05D001200 ORTHO05D002731 4.1e-10 69.3 89 47.2
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 6.9e-10 68.6 221 25.8
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 6.9e-10 68.6 221 25.8
Lalb_Chr13g0292831 Lupinus albus HOM05D001200 ORTHO05D002731 6.9e-10 68.6 61 57.4
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 1.2e-09 67.8 89 44.9
TPR.G24771 Trifolium pratense HOM05D001200 ORTHO05D002731 1.2e-09 67.8 70 55.7
Thhalv10017742m.g Eutrema salsugineum HOM05D001200 ORTHO05D002731 1.5e-09 67.4 34 85.3
Lalb_Chr18g0049431 Lupinus albus HOM05D001200 ORTHO05D002731 1.5e-09 67.4 48 66.7
BolSC35t60694H Brassica oleracea HOM05D001200 ORTHO05D002731 2.0e-09 67.0 34 85.3
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 2.0e-09 67.0 124 37.1
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 2.6e-09 66.6 78 48.7
Medtr3g098750 Medicago truncatula HOM05D003236 ORTHO05D003620 4.5e-09 65.9 78 53.8
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 5.9e-09 65.5 221 25.3
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 2.9e-08 63.2 141 31.2
Medtr8g086440 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-07 60.8 94 40.4
Solyc01g065610.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 2.5e-07 60.1 87 44.8
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 3.2e-07 59.7 221 24.9
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 4.2e-07 59.3 221 24.9
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 4.2e-07 59.3 221 24.9
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 4.2e-07 59.3 221 24.9
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 5.5e-07 58.9 221 24.4
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 5.5e-07 58.9 220 25.0
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 1.2e-06 57.8 203 24.1
Medtr3g082380 Medicago truncatula HOM05D001200 ORTHO05D002731 1.6e-06 57.4 121 38.0
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 2.1e-06 57.0 92 33.7
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 2.1e-06 57.0 203 24.1
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 2.7e-06 56.6 92 42.4
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 3.6e-06 56.2 78 44.9
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 3.6e-06 56.2 221 24.4
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 4.7e-06 55.8 203 26.6
Medtr8g056200 Medicago truncatula HOM05D001200 ORTHO05D002731 7.9e-06 55.1 76 43.4


User provided reference genes

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