Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.1e-281 972.6 475 100.0
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.7e-218 762.7 422 83.9
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.3e-215 752.3 423 82.5
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.8e-207 726.1 425 78.8
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 1.8e-204 716.1 453 74.2
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 4.0e-204 714.9 418 79.2
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.3e-204 714.5 445 75.3
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 6.9e-204 714.1 442 74.9
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 6.9e-204 714.1 420 78.1
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 9.0e-204 713.8 419 79.0
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.2e-203 713.4 452 74.6
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 2.0e-203 712.6 424 77.6
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.0e-203 712.6 427 77.3
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 2.6e-203 712.2 424 77.8
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.6e-203 712.2 418 79.2
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.4e-203 711.8 423 78.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.4e-203 711.8 439 75.9
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 3.4e-203 711.8 429 77.9
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 3.4e-203 711.8 429 76.7
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 5.8e-203 711.1 423 78.3
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 5.8e-203 711.1 466 72.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 7.6e-203 710.7 424 77.6
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 2.2e-202 709.1 459 74.1
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.9e-202 708.8 457 74.2
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.9e-202 708.8 439 74.9
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 2.9e-202 708.8 424 77.4
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.8e-202 708.4 418 79.2
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.8e-202 708.4 424 76.9
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.9e-202 708.0 424 77.6
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.5e-202 707.6 419 78.8
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.5e-202 707.6 418 77.5
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 8.4e-202 707.2 420 76.9
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.1e-201 706.8 420 77.4
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.4e-201 706.4 425 76.9
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.4e-201 706.4 418 78.2
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.9e-201 706.1 425 76.5
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.9e-201 706.1 427 75.9
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.5e-201 705.7 418 77.3
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 3.2e-201 705.3 465 72.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 3.2e-201 705.3 427 75.9
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 3.2e-201 705.3 429 76.2
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 3.2e-201 705.3 424 76.4
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 4.2e-201 704.9 425 77.2
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 4.2e-201 704.9 456 73.7
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 5.5e-201 704.5 457 73.3
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.3e-201 703.7 454 74.0
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.6e-200 703.0 418 78.2
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 2.1e-200 702.6 427 75.6
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 2.1e-200 702.6 424 77.1
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.5e-200 701.8 456 73.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 4.6e-200 701.4 456 72.8
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.6e-200 701.4 425 76.7
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 7.9e-200 700.7 431 75.6
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.0e-199 700.3 425 76.5
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.0e-199 700.3 456 72.8
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.0e-199 700.3 423 76.1
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.0e-199 700.3 412 79.1
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.0e-199 700.3 418 78.5
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.0e-199 700.3 423 77.1
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.8e-199 699.5 423 76.8
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.0e-199 698.7 425 76.2
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 3.0e-199 698.7 424 76.7
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.9e-199 698.4 423 76.1
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 5.1e-199 698.0 452 73.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 6.7e-199 697.6 456 72.4
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.9e-198 696.0 423 75.7
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.5e-198 695.7 466 70.8
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 3.3e-198 695.3 427 76.3
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 5.7e-198 694.5 418 76.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 7.4e-198 694.1 420 75.0
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 2.8e-197 692.2 423 75.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 4.8e-197 691.4 446 72.9
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 6.3e-197 691.0 427 75.9
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 8.2e-197 690.6 417 76.7
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.8e-194 681.8 418 74.6
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.1e-193 680.2 441 72.1
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.6e-192 676.4 457 70.7
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 4.8e-189 664.8 418 74.4
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 6.3e-189 664.5 468 68.8
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.1e-188 663.7 397 77.6
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.8e-188 662.9 428 71.5
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 1.2e-187 660.2 397 76.8
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 5.9e-187 657.9 420 74.0
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 2.7e-184 649.0 444 69.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.6e-184 648.7 428 71.3
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.7e-182 641.3 468 68.2
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 4.8e-181 638.3 486 64.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 4.5e-179 631.7 420 71.4
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.1e-177 627.1 380 77.4
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.1e-176 622.9 429 68.5
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.1e-176 622.9 441 68.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.4e-172 610.1 518 59.7
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 3.1e-172 609.0 375 76.5
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 9.1e-172 607.4 385 75.6
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 9.1e-172 607.4 454 65.4
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 8.5e-170 600.9 361 76.5
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 3.0e-167 592.4 424 66.7
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 5.9e-163 578.2 435 62.3
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 9.4e-161 570.9 353 75.1
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 9.8e-158 560.8 401 67.6
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 6.8e-151 538.1 375 69.6
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.2e-141 506.5 489 55.8
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 3.1e-135 486.1 373 62.2
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.0e-131 473.4 303 74.9
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 7.3e-129 464.9 268 80.6
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.9e-125 452.2 265 79.2
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.6e-115 420.6 424 51.7
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 6.2e-104 382.1 221 80.1
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.2e-56 224.2 143 71.3
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 6.3e-56 222.6 145 68.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 7.7e-54 215.7 185 58.4
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 5.7e-33 146.4 91 67.0
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.3e-29 135.2 79 79.7
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 7.8e-22 109.4 79 65.8
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 7.3e-20 102.8 57 82.5
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 4.6e-14 83.6 49 79.6
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.1e-10 70.9 42 78.6
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.2e-10 70.1 43 76.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.8e-10 69.7 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 7.1e-07 59.7 40 72.5


User provided reference genes

Program Settings