Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 0.0e+00 1159.8 569 100.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 3.4e-133 479.6 555 47.7
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 4.6e-130 469.2 560 46.4
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.3e-129 467.6 554 46.6
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 3.0e-129 466.5 552 46.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 3.0e-129 466.5 558 46.1
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 3.0e-129 466.5 558 45.9
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 9.7e-128 461.5 543 46.6
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 3.7e-127 459.5 562 45.2
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 4.8e-127 459.1 555 45.0
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 8.2e-127 458.4 563 46.0
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.1e-126 458.0 552 46.0
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.1e-126 458.0 585 44.8
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 2.4e-126 456.8 562 46.6
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 3.1e-126 456.4 558 46.2
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 1.5e-125 454.1 548 46.2
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.0e-125 453.8 559 44.9
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 2.6e-125 453.4 542 45.9
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.6e-125 453.4 567 45.0
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 3.4e-125 453.0 568 45.4
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 3.4e-125 453.0 552 45.3
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.5e-125 452.6 555 46.1
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 5.9e-125 452.2 542 45.8
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 5.9e-125 452.2 563 45.5
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.7e-124 450.7 543 47.5
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 1.7e-124 450.7 563 45.3
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 2.2e-124 450.3 568 44.9
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 2.2e-124 450.3 560 44.6
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 2.9e-124 449.9 545 46.2
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.9e-124 449.9 553 45.0
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.5e-124 448.7 552 45.1
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 8.5e-124 448.4 553 43.6
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 8.5e-124 448.4 564 44.1
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.9e-123 447.2 552 45.7
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 2.5e-123 446.8 567 44.3
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 4.2e-123 446.0 561 44.7
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 9.3e-123 444.9 552 44.9
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.6e-122 444.1 566 44.5
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 3.6e-122 443.0 558 44.1
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 3.6e-122 443.0 555 45.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 4.6e-122 442.6 563 43.5
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 6.1e-122 442.2 552 46.2
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.0e-121 441.4 542 45.9
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.4e-121 441.0 544 44.7
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.8e-121 440.7 535 45.0
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.8e-121 440.7 558 45.0
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 2.3e-121 440.3 560 44.1
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 3.0e-121 439.9 563 43.9
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 3.0e-121 439.9 549 45.0
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 3.9e-121 439.5 534 46.8
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 3.9e-121 439.5 554 45.3
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.1e-121 439.1 551 44.6
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 6.7e-121 438.7 544 45.8
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.1e-120 438.0 552 44.9
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.9e-120 437.2 557 45.1
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 4.3e-120 436.0 555 43.8
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 5.7e-120 435.6 543 43.5
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 5.7e-120 435.6 539 45.3
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.3e-119 434.5 555 44.1
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 3.7e-119 433.0 559 43.1
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 4.8e-119 432.6 561 43.7
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 6.3e-119 432.2 566 43.1
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 6.3e-119 432.2 565 43.2
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.8e-118 430.6 559 43.5
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.8e-118 430.6 551 43.4
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.2e-117 427.9 534 45.5
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 1.5e-117 427.6 559 42.2
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 2.0e-117 427.2 562 43.1
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 3.4e-117 426.4 560 43.2
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 3.4e-117 426.4 567 42.3
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 3.4e-117 426.4 567 42.3
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 5.9e-117 425.6 462 48.7
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 7.7e-117 425.2 542 43.7
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 7.7e-117 425.2 598 41.6
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.3e-116 424.5 556 44.4
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.2e-116 423.7 566 43.3
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 5.0e-116 422.5 539 42.3
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.5e-116 422.2 535 44.5
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 4.2e-115 419.5 524 43.3
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 4.7e-114 416.0 457 48.4
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 4.7e-114 416.0 561 43.7
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 2.3e-113 413.7 558 42.3
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 5.1e-113 412.5 481 46.8
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 8.8e-113 411.8 561 42.4
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 2.6e-112 410.2 560 41.2
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.7e-112 409.1 469 47.1
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 7.4e-112 408.7 466 46.6
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 9.7e-112 408.3 578 41.2
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 2.8e-111 406.8 549 42.1
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 3.7e-111 406.4 537 43.0
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.4e-110 403.7 469 46.7
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 4.5e-109 399.4 578 40.7
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 6.5e-108 395.6 467 46.7
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 7.4e-104 382.1 576 40.6
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 4.1e-102 376.3 562 41.3
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 6.5e-100 369.0 546 38.6
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 1.5e-99 367.9 559 40.6
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 2.5e-99 367.1 560 39.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 4.2e-99 366.3 556 40.6
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 7.0e-94 349.0 580 37.6
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.0e-88 330.9 378 47.4
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.7e-87 327.8 482 41.1
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 7.7e-85 318.9 500 39.0
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 1.4e-73 281.6 344 44.8
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.2e-71 274.2 464 36.9
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 5.4e-70 269.6 371 42.9
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 1.9e-67 261.2 566 32.5
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.4e-65 255.0 268 48.5
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 4.0e-65 253.4 428 34.6
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 2.3e-60 237.7 566 32.5
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 7.3e-59 232.6 837 25.9
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 2.5e-51 207.6 358 37.7
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 2.8e-50 204.1 421 30.9
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.6e-48 197.6 139 64.7
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.6e-42 178.3 373 35.9
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 2.4e-38 164.5 397 29.0
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.1e-22 109.8 96 56.2
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 2.1e-21 108.2 156 42.3
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.3e-18 99.0 101 47.5
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 4.5e-16 90.5 76 57.9


User provided reference genes

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