Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 2.5e-225 785.0 376 100.0
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.6e-134 483.4 375 58.7
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.5e-121 440.3 378 53.7
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 1.4e-119 433.7 369 53.7
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 2.5e-79 300.1 363 38.3
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 2.3e-69 266.9 274 42.0
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 6.7e-69 265.4 277 41.2
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 3.3e-68 263.1 273 41.0
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 3.3e-68 263.1 289 41.2
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 4.3e-68 262.7 273 41.0
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 7.4e-68 261.9 274 40.9
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 4.1e-66 256.1 276 41.3
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 5.3e-66 255.8 279 42.3
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 1.2e-65 254.6 275 42.2
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 5.9e-65 252.3 272 41.2
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 2.2e-64 250.4 273 40.7
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 1.1e-63 248.1 272 39.0
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 9.4e-63 245.0 278 37.8
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.2e-62 244.6 278 41.4
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.7e-62 243.4 273 40.7
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 6.1e-62 242.3 282 39.4
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.0e-61 241.5 272 40.4
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.0e-61 241.5 273 38.1
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 3.0e-61 240.0 272 39.0
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 5.1e-61 239.2 273 40.3
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 5.1e-61 239.2 279 39.4
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 5.1e-61 239.2 272 38.6
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 6.7e-61 238.8 273 39.9
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 1.5e-60 237.7 276 38.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.5e-60 237.7 274 37.6
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 5.7e-60 235.7 273 38.1
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 9.7e-60 235.0 278 39.9
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 4.8e-59 232.6 273 37.7
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 6.3e-59 232.3 273 38.8
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.1e-58 229.6 280 37.5
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 4.1e-58 229.6 278 38.8
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 4.1e-58 229.6 273 39.2
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 5.3e-58 229.2 269 39.4
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.6e-57 227.6 273 37.0
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 4.5e-57 226.1 274 39.1
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 7.7e-57 225.3 264 37.1
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.0e-56 224.9 283 36.7
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 1.7e-56 224.2 279 38.7
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.9e-56 223.4 273 37.0
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 6.5e-56 222.2 274 38.7
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 2.5e-55 220.3 278 37.8
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 4.2e-55 219.5 314 36.3
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 2.7e-54 216.9 241 39.4
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 3.6e-54 216.5 276 37.0
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 4.7e-54 216.1 276 37.3
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 5.2e-53 212.6 276 36.6
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 5.2e-53 212.6 276 36.6
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 6.7e-53 212.2 254 37.4
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 3.3e-52 209.9 234 38.9
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 1.8e-50 204.1 278 37.1
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 3.1e-50 203.4 278 36.3
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 5.3e-50 202.6 272 35.3
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 9.1e-50 201.8 273 35.2
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 1.6e-49 201.1 230 39.6
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 2.2e-48 197.2 274 34.3
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.2e-48 197.2 278 33.5
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 3.1e-42 176.8 253 36.0
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 2.2e-40 170.6 207 38.6
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-39 168.3 329 30.4
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 3.2e-39 166.8 249 30.9
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 7.2e-39 165.6 199 37.7
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 1.4e-37 161.4 210 34.3
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 1.4e-34 151.4 230 33.0
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.5e-33 146.7 204 30.9
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 7.7e-33 145.6 216 34.7
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 6.6e-32 142.5 369 27.6
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 8.0e-30 135.6 219 28.3
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.6e-25 121.3 209 27.8
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 4.3e-23 113.2 353 23.2
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.4e-21 108.2 106 48.1
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 1.4e-21 108.2 233 28.8
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.7e-19 101.3 101 47.5
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 5.0e-16 89.7 59 62.7
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 3.3e-15 87.0 122 32.8
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 4.7e-14 83.2 74 55.4


User provided reference genes

Program Settings