Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 0.0e+00 1307.4 719 100.0
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 0.0e+00 1307.4 719 100.0
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 4.9e-84 316.6 653 39.2
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.3e-81 308.5 630 37.5
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.7e-81 308.1 465 39.8
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 8.6e-81 305.8 640 35.5
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 1.5e-80 305.1 426 42.0
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 2.5e-80 304.3 637 35.9
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 3.3e-80 303.9 433 41.6
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 4.3e-80 303.5 440 42.5
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 9.5e-80 302.4 585 39.1
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 1.6e-79 301.6 648 37.2
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.6e-79 301.6 632 36.4
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 2.1e-79 301.2 633 39.2
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 4.7e-79 300.1 440 43.0
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 6.1e-79 299.7 641 37.1
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 6.1e-79 299.7 640 39.2
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 8.0e-79 299.3 634 36.6
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 8.0e-79 299.3 638 35.4
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 1.4e-78 298.5 702 34.0
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 1.4e-78 298.5 631 38.5
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.8e-78 298.1 426 40.8
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.8e-78 298.1 629 39.4
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 2.3e-78 297.7 436 42.2
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.0e-78 297.4 426 40.6
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 3.0e-78 297.4 443 40.6
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 3.0e-78 297.4 433 41.8
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 6.8e-78 296.2 638 36.5
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 6.8e-78 296.2 632 39.1
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 1.2e-77 295.4 445 40.0
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 1.5e-77 295.0 650 38.8
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 2.0e-77 294.7 620 36.0
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.6e-77 294.3 426 41.1
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 3.4e-77 293.9 645 35.8
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 5.7e-77 293.1 426 40.4
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 9.8e-77 292.4 428 46.0
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 9.8e-77 292.4 430 39.5
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 1.7e-76 291.6 634 35.8
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 2.2e-76 291.2 629 36.1
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 3.7e-76 290.4 642 38.0
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 4.9e-76 290.0 645 35.8
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 8.3e-76 289.3 635 35.7
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 8.3e-76 289.3 430 40.9
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.1e-75 288.9 631 38.2
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 3.2e-75 287.3 634 35.2
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 5.4e-75 286.6 426 44.8
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 2.7e-74 284.3 431 42.5
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 3.5e-74 283.9 436 40.8
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 3.0e-73 280.8 436 43.1
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.0e-73 280.0 647 34.9
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 4.3e-72 276.9 631 38.2
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 5.6e-72 276.6 723 33.7
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 2.1e-71 274.6 647 38.6
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.1e-71 274.6 440 39.8
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 3.6e-71 273.9 440 39.3
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 3.6e-71 273.9 446 42.2
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 4.7e-71 273.5 434 41.9
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 6.2e-71 273.1 440 40.7
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 3.1e-70 270.8 632 37.8
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.1e-70 270.8 639 35.8
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 4.0e-70 270.4 429 39.2
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.2e-69 268.9 606 33.8
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 1.2e-69 268.9 661 35.1
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 2.0e-69 268.1 695 34.2
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 2.6e-69 267.7 426 43.0
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.6e-69 267.7 632 37.7
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.6e-69 267.7 446 41.5
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 2.6e-69 267.7 433 37.9
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 5.8e-69 266.5 429 39.4
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 7.5e-69 266.2 635 33.7
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 7.5e-69 266.2 673 34.2
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 9.8e-69 265.8 433 42.7
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.7e-68 265.0 433 41.8
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 2.2e-68 264.6 433 42.0
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 2.2e-68 264.6 584 33.9
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 6.4e-68 263.1 660 33.5
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 3.2e-67 260.8 432 41.9
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 4.1e-67 260.4 639 33.5
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 7.0e-67 259.6 631 33.0
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 9.2e-67 259.2 644 34.0
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 9.2e-67 259.2 635 32.4
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 3.5e-66 257.3 634 35.3
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 3.5e-66 257.3 661 30.7
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.7e-65 255.0 638 35.9
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.1e-64 252.3 434 37.6
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.5e-64 251.1 408 41.4
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 2.5e-64 251.1 426 36.9
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 9.5e-64 249.2 646 35.6
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 2.1e-63 248.1 657 34.9
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 4.7e-63 246.9 423 36.2
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 6.2e-63 246.5 421 40.4
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 8.1e-63 246.1 559 33.1
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 1.8e-62 245.0 460 34.6
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 3.1e-62 244.2 575 34.6
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 1.2e-61 242.3 373 40.2
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 2.6e-61 241.1 592 33.3
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 5.4e-59 233.4 622 31.8
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 7.1e-59 233.0 431 39.2
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 1.3e-57 228.8 386 38.3
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.7e-57 228.4 385 41.8
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.5e-56 225.3 650 33.2
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 8.1e-55 219.5 655 31.6
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 1.2e-47 195.7 288 41.3
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 5.1e-33 147.1 218 45.4
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 6.9e-14 83.6 205 30.7
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 1.4e-11 75.9 107 39.3
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 3.2e-11 74.7 129 35.7
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 4.2e-11 74.3 212 34.9
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 9.3e-11 73.2 152 32.2
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.0e-09 69.7 175 30.3
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 3.9e-09 67.8 285 27.7
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 5.1e-09 67.4 55 50.9
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 7.4e-08 63.5 153 37.3
PRCOL_00005660 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 4.8e-07 60.8 138 32.6
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 6.9e-06 57.0 297 28.6


User provided reference genes

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