Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 1.9e-255 885.6 514 100.0
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 4.5e-108 396.0 287 71.8
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 8.5e-107 391.7 283 69.6
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 2.6e-103 380.2 267 73.0
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 1.7e-102 377.5 267 73.4
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 2.8e-102 376.7 271 72.0
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 8.2e-102 375.2 277 70.8
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 1.1e-101 374.8 269 71.7
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 7.0e-101 372.1 267 71.2
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.5e-100 370.9 267 70.0
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 3.5e-100 369.8 288 68.8
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 5.9e-100 369.0 278 68.3
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 7.7e-100 368.6 286 66.8
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 7.7e-100 368.6 277 69.3
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.7e-99 367.5 269 69.5
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.7e-99 367.5 277 69.3
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.7e-99 367.5 277 69.3
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 2.2e-99 367.1 273 69.6
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 2.2e-99 367.1 265 70.6
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 3.8e-99 366.3 273 69.6
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 5.0e-99 365.9 263 70.7
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 8.5e-99 365.2 267 70.8
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.1e-98 364.8 271 69.0
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.5e-98 364.4 267 70.4
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.5e-98 363.6 267 71.5
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 2.5e-98 363.6 280 69.3
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 4.2e-98 362.8 267 69.7
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 5.5e-98 362.5 287 66.6
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 7.2e-98 362.1 271 69.4
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 9.4e-98 361.7 289 66.8
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.2e-97 361.3 271 68.3
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 1.2e-97 361.3 267 69.7
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 1.6e-97 360.9 265 69.1
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 2.1e-97 360.5 265 70.2
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 2.7e-97 360.1 269 69.9
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 3.6e-97 359.8 267 70.4
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 3.6e-97 359.8 267 70.0
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 3.6e-97 359.8 267 70.0
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.6e-97 359.8 267 70.8
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 4.7e-97 359.4 267 69.7
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 4.7e-97 359.4 267 70.8
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 6.1e-97 359.0 271 68.3
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 8.0e-97 358.6 269 69.5
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 8.0e-97 358.6 265 69.8
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 8.0e-97 358.6 269 69.5
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.0e-96 358.2 272 67.6
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 1.0e-96 358.2 267 68.5
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.4e-96 357.8 265 69.8
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 1.8e-96 357.5 269 69.1
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 2.3e-96 357.1 271 67.9
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 3.0e-96 356.7 271 67.9
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 3.0e-96 356.7 271 68.3
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 3.0e-96 356.7 277 66.8
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 4.0e-96 356.3 263 71.1
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 4.0e-96 356.3 259 70.7
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 4.0e-96 356.3 271 67.9
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 4.0e-96 356.3 281 65.8
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 5.2e-96 355.9 268 67.9
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 5.2e-96 355.9 271 67.9
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 5.2e-96 355.9 271 67.5
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 5.2e-96 355.9 272 66.9
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.2e-96 355.9 272 66.9
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 6.7e-96 355.5 271 67.5
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 6.7e-96 355.5 271 67.5
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 6.7e-96 355.5 271 67.5
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.7e-96 355.5 272 66.9
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 8.8e-96 355.1 271 68.3
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 1.1e-95 354.8 271 67.2
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.1e-95 354.8 268 68.7
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.5e-95 354.4 272 66.9
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 2.6e-95 353.6 266 68.8
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 2.6e-95 353.6 263 70.0
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 3.3e-95 353.2 283 65.7
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.7e-94 350.9 271 65.7
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 4.8e-94 349.4 255 69.4
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.1e-93 348.2 273 66.3
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.1e-93 348.2 269 66.5
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 1.8e-93 347.4 269 67.3
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 5.3e-93 345.9 282 65.2
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.6e-92 343.6 286 62.9
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 5.9e-92 342.4 273 65.6
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 5.9e-92 342.4 266 65.4
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 7.7e-92 342.0 252 69.0
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 5.0e-91 339.3 320 59.7
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 3.2e-90 336.7 285 62.5
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 2.7e-89 333.6 267 66.7
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 4.0e-88 329.7 268 63.8
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.0e-87 327.4 283 59.7
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.6e-87 327.0 283 59.7
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 4.4e-87 326.2 241 67.2
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 2.2e-86 323.9 231 72.7
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 5.0e-83 312.8 261 62.8
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 4.7e-81 306.2 224 71.4
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.0e-80 305.1 222 71.6
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 1.0e-80 305.1 410 46.8
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.0e-80 305.1 279 59.1
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 4.0e-80 303.1 415 46.0
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 2.0e-79 300.8 260 61.5
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 3.5e-76 290.0 220 69.1
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 3.8e-75 286.6 267 60.7
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 5.0e-75 286.2 254 62.6
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 1.1e-74 285.0 308 53.9
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 4.3e-74 283.1 271 57.6
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.6e-73 281.2 197 73.1
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.1e-73 280.8 289 51.2
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 6.1e-73 279.3 207 67.1
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 8.9e-72 275.4 285 56.1
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.0e-64 251.9 183 71.6
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 2.0e-63 247.7 287 54.4
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.0e-63 247.7 262 51.5
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.9e-61 241.1 177 70.6
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 7.8e-60 235.7 181 67.4
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 7.5e-55 219.2 273 51.6
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 2.9e-54 217.2 158 70.3
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 1.0e-51 208.8 307 44.3
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.5e-50 204.9 178 59.6
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 3.3e-50 203.8 136 72.1
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.4e-48 198.4 133 73.7
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.0e-43 182.2 143 62.9
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 6.8e-40 169.5 114 75.4
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 1.2e-39 168.7 132 65.9
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 1.7e-38 164.9 251 37.8
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.6e-33 148.3 108 65.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 3.8e-30 137.1 187 42.8
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.2e-22 111.3 85 69.4
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 2.7e-20 104.4 86 66.3
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 3.0e-19 100.9 180 35.0
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 5.5e-13 80.1 242 27.7
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 6.0e-12 76.6 57 66.7
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.5e-10 71.2 41 85.4
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 4.8e-09 67.0 37 89.2
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 6.9e-08 63.2 36 83.3


User provided reference genes

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