Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0067s0098 Marchantia polymorpha HOM05D005787 ORTHO05D007011 8.9e-306 1052.7 516 100.0
Mapoly0146s0040 Marchantia polymorpha HOM05D005787 ORTHO05D007011 9.2e-170 600.9 435 65.3
Manes.16G010400 Manihot esculenta HOM05D005787 ORTHO05D007011 7.9e-129 464.9 413 55.7
Pp3c5_11180 Physcomitrium patens HOM05D005787 ORTHO05D007011 6.7e-128 461.8 405 55.1
Cc09_g01960 Coffea canephora HOM05D005787 ORTHO05D007011 1.5e-127 460.7 404 54.7
Rhsim02G0110900 Rhododendron simsii HOM05D005787 ORTHO05D007011 2.0e-127 460.3 495 49.9
CANSAT56G2549 Cannabis sativa HOM05D005787 ORTHO05D007011 4.1e-125 452.6 421 53.0
GSVIVG01012651001 Vitis vinifera HOM05D005787 ORTHO05D007011 6.9e-125 451.8 410 54.6
SMO200G0166 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.2e-124 451.1 406 52.2
SalBow1G7047 Salvia bowleyana HOM05D005787 ORTHO05D007011 1.5e-124 450.7 405 54.3
BcaNung02245 Brassica carinata HOM05D005787 ORTHO05D007011 3.4e-124 449.5 405 53.8
EL10Ac8g20016 Beta vulgaris HOM05D005787 ORTHO05D007011 5.9e-124 448.7 497 47.7
AUR62021985 Chenopodium quinoa HOM05D005787 ORTHO05D007011 5.9e-124 448.7 406 53.0
BcaC09g51204 Brassica carinata HOM05D005787 ORTHO05D007011 7.7e-124 448.4 407 53.8
PSO541G2671 Papaver somniferum HOM05D005787 ORTHO05D007011 7.7e-124 448.4 406 53.7
THA.LOC104812988 Tarenaya hassleriana HOM05D005787 ORTHO05D007011 7.7e-124 448.4 407 52.3
Atru.chr10.2171 Acer truncatum HOM05D005787 ORTHO05D007011 1.0e-123 448.0 407 54.5
Dinv20032 Davidia involucrata HOM05D005787 ORTHO05D007011 1.0e-123 448.0 404 54.2
Hund21387 Selenicereus undatus HOM05D005787 ORTHO05D007011 1.0e-123 448.0 404 53.5
TAR624G0905 Trochodendron aralioides HOM05D005787 ORTHO05D007011 1.0e-123 448.0 404 54.5
AUR62012669 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.3e-123 447.6 406 53.0
BraA01t01253Z Brassica rapa HOM05D005787 ORTHO05D007011 1.7e-123 447.2 406 53.2
Aa31LG6G3750 Aethionema arabicum HOM05D005787 ORTHO05D007011 2.2e-123 446.8 406 53.4
PGR042G0837 Punica granatum HOM05D005787 ORTHO05D007011 2.2e-123 446.8 408 52.2
Solyc02g080320.4 Solanum lycopersicum HOM05D005787 ORTHO05D007011 2.2e-123 446.8 429 51.0
A01p13100 Brassica napus HOM05D005787 ORTHO05D007011 3.8e-123 446.0 409 53.8
Ciclev10015055m.g Citrus clementina HOM05D005787 ORTHO05D007011 3.8e-123 446.0 409 52.6
Actinidia11846 Actinidia chinensis HOM05D005787 ORTHO05D007011 6.5e-123 445.3 404 53.7
C01p15790 Brassica napus HOM05D005787 ORTHO05D007011 6.5e-123 445.3 409 53.8
BolC1t01532H Brassica oleracea HOM05D005787 ORTHO05D007011 6.5e-123 445.3 409 53.8
CARHR228510 Cardamine hirsuta HOM05D005787 ORTHO05D007011 6.5e-123 445.3 406 53.7
Sp7g19940 Schrenkiella parvula HOM05D005787 ORTHO05D007011 6.5e-123 445.3 406 53.9
FAN25G2524 Fragaria x ananassa HOM05D005787 ORTHO05D007011 8.5e-123 444.9 403 53.1
AL7G32160 Arabidopsis lyrata HOM05D005787 ORTHO05D007011 1.1e-122 444.5 408 53.7
CAN.G569.24 Capsicum annuum HOM05D005787 ORTHO05D007011 1.4e-122 444.1 412 51.9
RcHm_v2.0_Chr5g0003731 Rosa chinensis HOM05D005787 ORTHO05D007011 1.4e-122 444.1 402 53.2
AUR62012670 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.9e-122 443.7 406 54.2
AT4G21770 Arabidopsis thaliana HOM05D005787 ORTHO05D007011 2.5e-122 443.4 405 52.3
Ah.09g235150 Amaranthus hybridus HOM05D005787 ORTHO05D007011 3.2e-122 443.0 398 53.0
vmacro15819 Vaccinium macrocarpon HOM05D005787 ORTHO05D007011 3.2e-122 443.0 403 53.3
PGSC0003DMG400002087 Solanum tuberosum HOM05D005787 ORTHO05D007011 4.2e-122 442.6 429 50.3
FvH4_3g02480 Fragaria vesca HOM05D005787 ORTHO05D007011 7.2e-122 441.8 403 52.9
Lj1C1227T21 Lonicera japonica HOM05D005787 ORTHO05D007011 7.2e-122 441.8 408 53.2
Oeu015733.1 Olea europaea HOM05D005787 ORTHO05D007011 7.2e-122 441.8 408 53.2
QL05p074231 Quercus lobata HOM05D005787 ORTHO05D007011 7.2e-122 441.8 405 53.6
Haze_06771 Corylus avellana HOM05D005787 ORTHO05D007011 9.4e-122 441.4 404 54.5
Migut.H01558 Erythranthe guttata HOM05D005787 ORTHO05D007011 9.4e-122 441.4 406 53.0
Hund21388 Selenicereus undatus HOM05D005787 ORTHO05D007011 9.4e-122 441.4 398 54.5
Cpa.g.sc198.22 Carica papaya HOM05D005787 ORTHO05D007011 1.2e-121 441.0 410 52.2
Sabra04G0010700 Salix brachista HOM05D005787 ORTHO05D007011 1.6e-121 440.7 406 53.0
Potri.004G019100 Populus trichocarpa HOM05D005787 ORTHO05D007011 2.1e-121 440.3 406 53.0
Thhalv10025093m.g Eutrema salsugineum HOM05D005787 ORTHO05D007011 2.7e-121 439.9 406 52.2
Lalb_Chr18g0056211 Lupinus albus HOM05D005787 ORTHO05D007011 3.6e-121 439.5 491 47.0
Aqoxy1G03304 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 4.7e-121 439.1 406 52.5
Nn1g07089 Nelumbo nucifera HOM05D005787 ORTHO05D007011 4.7e-121 439.1 404 53.2
ECA248G2950 Erigeron canadensis HOM05D005787 ORTHO05D007011 7.9e-121 438.3 415 50.8
arahy.Tifrunner.gnm1.ann1.J4BAYR Arachis hypogaea HOM05D005787 ORTHO05D007011 1.0e-120 438.0 406 52.7
Sopen02g025020 Solanum pennellii HOM05D005787 ORTHO05D007011 1.0e-120 438.0 407 51.8
Carub.0007s1963 Capsella rubella HOM05D005787 ORTHO05D007011 1.4e-120 437.6 400 53.2
Prupe.4G024200 Prunus persica HOM05D005787 ORTHO05D007011 1.4e-120 437.6 407 52.3
Gohir.D05G171800 Gossypium hirsutum HOM05D005787 ORTHO05D007011 2.3e-120 436.8 438 51.8
CsaV3_1G010950 Cucumis sativus L. HOM05D005787 ORTHO05D007011 3.0e-120 436.4 491 47.5
Peaxi162Scf00262g00038 Petunia axillaris HOM05D005787 ORTHO05D007011 3.0e-120 436.4 407 52.3
ATR0752G095 Amborella trichopoda HOM05D005787 ORTHO05D007011 3.9e-120 436.0 404 51.5
MD10G1317600 Malus domestica HOM05D005787 ORTHO05D007011 5.1e-120 435.6 405 53.1
Sed0015393 Sechium edule HOM05D005787 ORTHO05D007011 5.1e-120 435.6 410 52.2
arahy.Tifrunner.gnm1.ann1.N0U7LY Arachis hypogaea HOM05D005787 ORTHO05D007011 6.7e-120 435.3 406 52.5
Gorai.009G176900 Gossypium raimondii HOM05D005787 ORTHO05D007011 6.7e-120 435.3 438 51.6
Glyma.15G106100 Glycine max HOM05D005787 ORTHO05D007011 8.8e-120 434.9 406 52.5
VMungo0540G0861 Vigna mungo HOM05D005787 ORTHO05D007011 1.5e-119 434.1 406 52.7
Thecc.06G217000 Theobroma cacao HOM05D005787 ORTHO05D007011 2.0e-119 433.7 410 52.4
Lj6g0006260 Lotus japonicus HOM05D005787 ORTHO05D007011 4.4e-119 432.6 461 47.7
Phvul.006G151200 Phaseolus vulgaris HOM05D005787 ORTHO05D007011 4.4e-119 432.6 406 52.2
Psat1g182520 Pisum sativum HOM05D005787 ORTHO05D007011 4.4e-119 432.6 409 52.1
ClCG03G004890 Citrullus lanatus HOM05D005787 ORTHO05D007011 5.7e-119 432.2 480 46.9
Lsat_1_v5_gn_1_122000 Lactuca sativa HOM05D005787 ORTHO05D007011 1.3e-118 431.0 409 52.1
Glyma.13G206600 Glycine max HOM05D005787 ORTHO05D007011 1.7e-118 430.6 406 52.0
CsaV3_1G010930 Cucumis sativus L. HOM05D005787 ORTHO05D007011 2.8e-118 429.9 406 51.0
Zm00001eb110780 Zea mays HOM05D005787 ORTHO05D007011 2.8e-118 429.9 406 51.7
Eucgr.E04102 Eucalyptus grandis HOM05D005787 ORTHO05D007011 6.3e-118 428.7 411 51.8
TPR.G7642 Trifolium pratense HOM05D005787 ORTHO05D007011 6.3e-118 428.7 405 51.1
HanXRQChr01g0003621 Helianthus annuus HOM05D005787 ORTHO05D007011 1.1e-117 427.9 412 50.2
CSS0006555 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 4.1e-117 426.0 434 50.2
Lsat_1_v5_gn_1_128660 Lactuca sativa HOM05D005787 ORTHO05D007011 4.1e-117 426.0 412 51.5
Ah.09g235140 Amaranthus hybridus HOM05D005787 ORTHO05D007011 5.3e-117 425.6 418 51.7
Medtr2g022770 Medicago truncatula HOM05D005787 ORTHO05D007011 1.5e-116 424.1 419 49.4
Nitab4.5_0003893g0010 Nicotiana tabacum HOM05D005787 ORTHO05D007011 1.5e-116 424.1 429 49.2
Gohir.A05G168600 Gossypium hirsutum HOM05D005787 ORTHO05D007011 2.0e-116 423.7 449 49.7
Ca_00626_v3 Cicer arietinum L. HOM05D005787 ORTHO05D007011 4.5e-116 422.5 406 50.5
HanXRQChr05g0138101 Helianthus annuus HOM05D005787 ORTHO05D007011 1.1e-114 417.9 407 50.6
SGA_v2.0_scaffold89G27454 Striga asiatica HOM05D005787 ORTHO05D007011 1.1e-114 417.9 511 44.8
AUR62021984 Chenopodium quinoa HOM05D005787 ORTHO05D007011 1.9e-114 417.2 420 50.7
Lj6g0025395 Lotus japonicus HOM05D005787 ORTHO05D007011 5.5e-114 415.6 410 49.8
Lalb_Chr18g0056221 Lupinus albus HOM05D005787 ORTHO05D007011 7.2e-114 415.2 405 50.6
Medtr7g113450 Medicago truncatula HOM05D005787 ORTHO05D007011 2.7e-113 413.3 404 50.2
Psat0s341g0040 Pisum sativum HOM05D005787 ORTHO05D007011 2.7e-113 413.3 409 50.4
TPR.G33224 Trifolium pratense HOM05D005787 ORTHO05D007011 1.8e-112 410.6 409 49.4
EL10Ac8g20017 Beta vulgaris HOM05D005787 ORTHO05D007011 8.8e-112 408.3 409 50.1
DCAR_024937 Daucus carota HOM05D005787 ORTHO05D007011 1.8e-109 400.6 389 51.9
HPP92_013307 Vanilla planifolia HOM05D005787 ORTHO05D007011 5.3e-109 399.1 365 53.4
MELO3C002471.2 Cucumis melo HOM05D005787 ORTHO05D007011 8.5e-107 391.7 419 48.0
MD10G1317000 Malus domestica HOM05D005787 ORTHO05D007011 5.5e-106 389.0 336 55.7
MELO3C002473.2 Cucumis melo HOM05D005787 ORTHO05D007011 6.1e-105 385.6 374 51.3
SMO200G0270 Selaginella moellendorffii HOM05D005787 ORTHO05D007011 1.4e-104 384.4 443 45.1
unitig_0.g957 Utricularia gibba HOM05D005787 ORTHO05D007011 1.4e-104 384.4 368 51.1
Sc05g0009040 Simmondsia chinensis HOM05D005787 ORTHO05D007011 6.3e-102 375.6 307 59.0
MBI02_g15259_MAGBIO Magnolia biondii HOM05D005787 ORTHO05D007011 3.2e-98 363.2 410 47.6
CiPaw.09G089100 Carya illinoinensis HOM05D005787 ORTHO05D007011 2.3e-96 357.1 306 55.9
CiPaw.10G069200 Carya illinoinensis HOM05D005787 ORTHO05D007011 8.8e-96 355.1 306 55.6
ECA248G3226 Erigeron canadensis HOM05D005787 ORTHO05D007011 4.4e-95 352.8 409 44.7
Aqoxy92s001 Aquilegia oxysepala HOM05D005787 ORTHO05D007011 2.1e-81 307.4 342 45.9
CSS0044707 Camellia sinensis var. sinensis HOM05D005787 ORTHO05D007011 2.0e-79 300.8 247 61.1
CANSAT64G1034 Cannabis sativa HOM05D005787 ORTHO05D007011 1.7e-78 297.7 252 59.1
DCAR_029795 Daucus carota HOM05D005787 ORTHO05D007011 2.7e-68 263.8 232 55.2
SEGI_04414 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 6.6e-67 259.2 251 47.0
AagrBONN_evm.TU.Sc2ySwM_228.3336 Anthoceros agrestis HOM05D005787 ORTHO05D007011 1.3e-62 245.0 199 60.3
CDE11G0446 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 1.1e-50 205.3 196 50.0
CDE11G0095 Ceratophyllum demersum HOM05D005787 ORTHO05D007011 5.8e-47 193.0 168 57.7
SEGI_19902 Sequoiadendron giganteum HOM05D005787 ORTHO05D007011 4.9e-46 189.9 157 60.5
RcHm_v2.0_Chr5g0003761 Rosa chinensis HOM05D005787 ORTHO05D007011 4.5e-39 166.8 151 54.3
MSTRG.13153 Avicennia marina HOM05D005787 ORTHO05D007011 4.6e-36 156.8 175 44.0
Cre11.g474850 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 3.5e-28 130.6 381 28.6
MCO11G946 Micromonas commoda HOM05D005787 ORTHO05D007011 1.9e-26 124.8 317 26.8
DCAR_029794 Daucus carota HOM05D005787 ORTHO05D007011 1.6e-25 121.7 137 41.6
Hma1.2p1_3055F.1_g332150 Hydrangea macrophylla HOM05D005787 ORTHO05D007011 2.1e-25 121.3 139 41.0
MCO10G204 Micromonas commoda HOM05D005787 ORTHO05D007011 2.3e-19 101.3 358 26.0
PRCOL_00006623 Prasinoderma coloniale HOM05D005787 ORTHO05D007011 1.9e-18 98.2 421 25.9
BcaC05g26802 Brassica carinata HOM05D005787 ORTHO05D007011 5.3e-16 90.1 71 60.6
A09p39340 Brassica napus HOM05D005787 ORTHO05D007011 4.3e-10 70.5 76 48.7
Cre10.g462500 Chlamydomonas reinhardtii HOM05D005787 ORTHO05D007011 1.1e-08 65.9 166 27.7
A01p18320 Brassica napus HOM05D005787 ORTHO05D007011 5.3e-08 63.5 73 46.6


User provided reference genes

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