Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 0.0e+00 1976.4 1120 100.0
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 1.8e-138 498.0 1091 35.0
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 2.8e-123 447.6 684 40.4
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.7e-123 447.2 695 40.4
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 1.4e-117 428.7 691 39.4
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 4.9e-115 420.2 695 38.8
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 5.4e-114 416.8 687 37.6
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 7.0e-114 416.4 730 36.7
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.0e-113 414.8 691 38.4
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 2.0e-113 414.8 728 38.0
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 1.7e-112 411.8 723 37.3
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 2.9e-112 411.0 684 37.6
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 5.0e-112 410.2 727 37.0
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 1.1e-111 409.1 722 37.5
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 2.8e-110 404.4 741 36.4
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 2.8e-110 404.4 727 36.7
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 4.7e-110 403.7 739 37.5
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 5.2e-109 400.2 788 34.9
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 8.9e-109 399.4 768 35.8
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 8.9e-109 399.4 738 36.0
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 1.5e-108 398.7 859 33.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 2.0e-108 398.3 729 36.9
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 3.4e-108 397.5 732 35.1
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 9.8e-108 396.0 792 35.6
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 1.3e-107 395.6 727 37.0
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.3e-107 395.6 716 36.6
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 2.2e-107 394.8 786 35.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 2.2e-107 394.8 720 36.9
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 8.3e-107 392.9 746 37.0
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 1.4e-106 392.1 668 37.3
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 1.8e-106 391.7 732 36.1
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 1.8e-106 391.7 739 36.5
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.8e-106 391.7 745 35.8
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 2.4e-106 391.3 712 36.2
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 2.4e-106 391.3 724 37.0
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 3.2e-106 391.0 760 36.2
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 5.4e-106 390.2 751 36.9
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 7.0e-106 389.8 713 37.3
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 7.0e-106 389.8 692 36.0
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 7.0e-106 389.8 744 35.8
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 2.0e-105 388.3 782 35.7
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 2.7e-105 387.9 721 36.2
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 3.5e-105 387.5 734 37.6
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 3.5e-105 387.5 699 36.1
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 4.6e-105 387.1 714 35.7
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 4.6e-105 387.1 747 36.4
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 5.9e-105 386.7 756 35.2
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 5.9e-105 386.7 732 37.0
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 5.9e-105 386.7 748 34.6
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 5.9e-105 386.7 721 36.6
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 1.0e-104 386.0 723 34.3
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 1.7e-104 385.2 740 35.9
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 3.0e-104 384.4 688 36.5
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 6.6e-104 383.3 1078 30.7
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 6.6e-104 383.3 751 36.0
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 8.6e-104 382.9 699 36.3
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.1e-103 382.5 717 36.3
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.9e-103 381.7 663 35.7
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 1.9e-103 381.7 841 33.4
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 2.5e-103 381.3 744 35.9
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 2.5e-103 381.3 744 35.9
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.3e-103 380.9 700 35.7
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 9.5e-103 379.4 715 36.1
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 1.2e-102 379.0 713 35.8
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 1.6e-102 378.6 716 35.2
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 2.1e-102 378.3 703 36.0
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.1e-102 378.3 743 35.5
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 2.8e-102 377.9 665 36.2
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 4.7e-102 377.1 768 34.5
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 6.2e-102 376.7 717 36.1
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.8e-101 375.2 761 35.2
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 5.8e-100 370.2 770 35.2
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 5.8e-100 370.2 786 34.1
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 9.8e-100 369.4 703 35.7
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 1.3e-99 369.0 814 35.3
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.7e-99 368.6 782 34.9
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 3.2e-98 364.4 735 35.5
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 4.1e-98 364.0 719 36.0
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 1.6e-97 362.1 732 34.0
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 3.0e-96 357.8 763 33.9
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 5.0e-96 357.1 689 34.1
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 1.1e-95 355.9 656 37.0
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.1e-95 355.9 787 33.8
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 2.5e-95 354.8 639 35.8
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 7.3e-95 353.2 710 35.6
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 6.2e-94 350.1 732 33.5
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 6.2e-94 350.1 787 33.4
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 8.1e-94 349.7 728 35.3
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.4e-90 339.0 686 34.4
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 8.6e-88 329.7 729 33.2
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.4e-85 322.4 651 34.3
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 1.6e-81 308.9 569 37.1
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 3.0e-80 304.7 766 31.1
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.0e-80 304.7 504 37.7
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 3.6e-78 297.7 990 28.1
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 3.8e-75 287.7 460 36.7
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 9.3e-74 283.1 407 40.3
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 1.5e-71 275.8 362 40.6
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 7.6e-68 263.5 621 33.0
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 1.7e-67 262.3 579 35.4
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 3.5e-65 254.6 579 33.9
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 3.9e-64 251.1 423 35.5
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 4.3e-55 221.1 227 48.0
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 5.3e-53 214.2 360 36.1
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 3.4e-52 211.5 197 54.3
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 3.5e-49 201.4 792 26.9
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 1.3e-40 172.9 497 30.4
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 2.9e-35 155.2 436 30.3
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 1.4e-32 146.4 133 54.1
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 4.4e-31 141.4 436 30.3
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.1e-29 136.7 126 53.2
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 2.7e-25 122.1 571 23.6
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 6.1e-25 120.9 230 37.8
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 1.3e-19 103.2 211 34.6
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 7.5e-15 87.4 662 23.7
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 5.0e-11 74.7 62 53.2
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.1e-10 73.6 125 47.2
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.9e-10 72.8 68 45.6
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 3.4e-07 62.0 145 37.2
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 4.4e-07 61.6 132 33.3


User provided reference genes

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