Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 2.7e-96 355.5 209 100.0
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 1.2e-35 154.1 204 48.0
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 1.6e-35 153.7 208 42.8
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 2.5e-33 146.4 207 46.4
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 2.1e-32 143.3 207 47.3
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 2.8e-32 142.9 207 45.9
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 3.6e-32 142.5 205 45.9
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 4.8e-32 142.1 216 44.4
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 8.1e-32 141.4 207 45.9
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 1.1e-31 141.0 206 45.1
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 1.4e-31 140.6 205 44.4
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 1.8e-31 140.2 205 43.9
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 1.8e-31 140.2 227 43.6
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 2.4e-31 139.8 207 44.4
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 3.1e-31 139.4 211 43.6
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 5.3e-31 138.7 211 46.9
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 6.9e-31 138.3 205 45.4
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 1.2e-30 137.5 214 43.9
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 1.2e-30 137.5 208 45.2
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 1.2e-30 137.5 209 50.2
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 2.0e-30 136.7 224 43.8
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 2.6e-30 136.3 209 44.5
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 4.5e-30 135.6 208 46.2
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 4.5e-30 135.6 208 46.2
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 4.5e-30 135.6 214 43.5
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 5.8e-30 135.2 210 44.3
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 5.8e-30 135.2 213 45.5
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 7.6e-30 134.8 200 45.5
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 7.6e-30 134.8 209 44.5
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 9.9e-30 134.4 206 43.7
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 9.9e-30 134.4 206 43.7
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 9.9e-30 134.4 197 45.7
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 1.3e-29 134.0 195 44.1
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 1.3e-29 134.0 209 43.1
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 1.7e-29 133.7 200 45.5
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 1.7e-29 133.7 209 42.1
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 1.7e-29 133.7 214 43.5
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 2.2e-29 133.3 205 45.4
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 2.2e-29 133.3 205 42.4
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 2.2e-29 133.3 205 42.4
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 2.9e-29 132.9 209 42.1
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 2.9e-29 132.9 206 42.7
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 2.9e-29 132.9 208 44.7
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 2.9e-29 132.9 209 43.1
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 2.9e-29 132.9 214 43.9
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 3.8e-29 132.5 206 41.7
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 4.9e-29 132.1 214 43.5
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 4.9e-29 132.1 209 43.1
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 6.4e-29 131.7 197 49.2
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 8.4e-29 131.3 211 43.1
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 8.4e-29 131.3 209 42.6
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 8.4e-29 131.3 215 40.9
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 1.1e-28 131.0 205 44.9
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 1.1e-28 131.0 205 44.9
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 1.1e-28 131.0 209 41.6
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 1.4e-28 130.6 215 44.7
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 2.4e-28 129.8 197 44.2
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 3.2e-28 129.4 210 41.4
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 3.2e-28 129.4 218 41.3
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 4.2e-28 129.0 208 44.2
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 7.1e-28 128.3 208 43.8
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 7.1e-28 128.3 208 43.3
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 9.3e-28 127.9 202 44.1
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 1.6e-27 127.1 201 46.3
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 1.6e-27 127.1 234 40.6
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 2.7e-27 126.3 208 44.7
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 3.5e-27 125.9 213 41.3
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 4.6e-27 125.6 214 41.6
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 4.6e-27 125.6 207 43.0
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 6.0e-27 125.2 218 40.4
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 1.3e-26 124.0 202 39.6
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 1.8e-26 123.6 213 42.3
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 1.8e-26 123.6 210 41.4
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 1.8e-26 123.6 204 40.7
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 1.8e-26 123.6 215 41.9
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 2.3e-26 123.2 203 42.4
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 2.3e-26 123.2 215 42.3
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 2.3e-26 123.2 209 41.1
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 3.0e-26 122.9 210 42.4
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 3.0e-26 122.9 209 41.1
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 3.9e-26 122.5 206 40.8
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 3.9e-26 122.5 203 42.9
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 3.9e-26 122.5 209 42.1
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 5.1e-26 122.1 215 46.0
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 6.7e-26 121.7 209 44.5
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 6.7e-26 121.7 211 40.3
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 8.7e-26 121.3 206 38.8
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 8.7e-26 121.3 202 48.0
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 1.1e-25 120.9 218 40.4
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 1.9e-25 120.2 248 37.1
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 1.9e-25 120.2 216 41.7
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 1.9e-25 120.2 199 41.7
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 2.5e-25 119.8 237 35.9
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 3.3e-25 119.4 212 40.6
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 5.6e-25 118.6 208 42.8
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 7.4e-25 118.2 203 38.4
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 7.4e-25 118.2 208 41.8
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 9.6e-25 117.9 233 38.6
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 1.3e-24 117.5 207 38.2
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.3e-24 117.5 219 40.2
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 2.8e-24 116.3 195 42.6
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 3.7e-24 115.9 177 46.3
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 3.7e-24 115.9 213 45.5
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 3.7e-24 115.9 213 45.5
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 3.7e-24 115.9 245 38.8
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 1.8e-23 113.6 212 46.2
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 1.8e-23 113.6 212 46.2
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 1.8e-23 113.6 212 46.2
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 3.4e-22 109.4 220 41.8
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 3.4e-22 109.4 212 37.7
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 5.8e-22 108.6 68 76.5
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 1.0e-21 107.8 304 33.9
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 1.3e-21 107.5 70 78.6
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 2.2e-21 106.7 214 42.5
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 2.9e-21 106.3 202 47.0
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 2.9e-21 106.3 202 47.0
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 4.9e-21 105.5 211 39.8
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 1.1e-20 104.4 166 44.6
AagrBONN_evm.TU.Sc2ySwM_344.2060 Anthoceros agrestis HOM05D004799 ORTHO05D005500 4.2e-20 102.4 68 72.1
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 4.2e-20 102.4 198 36.4
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 9.3e-20 101.3 167 44.9
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 9.3e-20 101.3 167 44.9
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 2.1e-19 100.1 247 34.4
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 2.1e-19 100.1 247 34.4
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 2.7e-19 99.8 203 38.9
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 2.3e-18 96.7 209 36.8
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 3.0e-18 96.3 208 37.5
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 2.8e-16 89.7 287 31.4
SEGI_00858 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 3.7e-16 89.4 84 59.5
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 2.4e-15 86.7 148 39.9
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 3.5e-11 72.8 196 31.1
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 3.9e-10 69.3 168 34.5
Cre06.g279250 Chlamydomonas reinhardtii HOM05D004799 ORTHO05D005500 8.7e-10 68.2 197 28.9
Pp3c4_27250 Physcomitrium patens HOM05D004799 ORTHO05D005500 4.3e-09 65.9 160 34.4
SMO367G0479 Selaginella moellendorffii HOM05D004799 ORTHO05D005500 4.3e-09 65.9 40 80.0
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 1.6e-08 63.9 167 31.1
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 6.3e-08 62.0 91 44.0
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 4.1e-07 59.3 157 33.1
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 1.2e-06 57.8 106 38.7


User provided reference genes

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