Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 0.0e+00 1902.5 977 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 5.0e-217 758.8 1000 46.6
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 2.3e-177 627.1 976 41.9
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 8.7e-177 625.2 982 43.2
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.3e-167 594.7 976 41.0
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 3.1e-142 510.4 968 35.2
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 4.6e-138 496.5 1199 35.4
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 1.2e-125 455.3 957 33.5
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 3.5e-125 453.8 958 33.0
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 5.9e-125 453.0 958 32.9
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 1.0e-124 452.2 958 32.2
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 1.9e-123 448.0 958 32.6
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 1.9e-123 448.0 961 31.8
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 9.4e-123 445.7 960 33.3
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.1e-122 444.5 961 32.4
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 8.0e-122 442.6 961 31.4
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 1.8e-121 441.4 960 33.3
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 8.8e-121 439.1 958 32.2
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 1.2e-120 438.7 958 32.2
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 7.5e-120 436.0 967 32.8
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 1.7e-119 434.9 958 32.3
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 1.1e-118 432.2 959 32.2
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.8e-118 431.4 959 32.2
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.8e-118 431.4 958 31.2
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 1.8e-118 431.4 1021 31.0
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 4.1e-118 430.3 960 31.8
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 4.1e-118 430.3 955 32.7
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 7.0e-118 429.5 958 31.9
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 9.1e-118 429.1 958 31.8
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 9.1e-118 429.1 959 31.5
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 2.0e-117 427.9 958 30.8
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 1.7e-116 424.9 961 32.2
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 2.9e-116 424.1 958 31.9
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 3.8e-116 423.7 958 32.3
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 8.5e-116 422.5 958 31.0
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 9.4e-115 419.1 958 31.7
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 1.2e-114 418.7 958 32.4
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 1.6e-114 418.3 958 31.4
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.1e-114 417.9 961 31.7
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 4.7e-114 416.8 958 31.5
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.8e-113 412.5 960 30.9
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 2.0e-112 411.4 956 31.6
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 2.6e-112 411.0 961 30.5
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 3.4e-112 410.6 964 30.6
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 7.5e-112 409.5 935 30.8
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 1.3e-111 408.7 961 30.7
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 1.3e-111 408.7 958 31.1
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 1.7e-111 408.3 958 30.9
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 6.3e-111 406.4 957 30.9
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.8e-110 404.8 957 31.0
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.8e-110 404.8 960 31.7
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 7.0e-110 402.9 957 30.9
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 1.6e-109 401.7 957 30.8
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 2.0e-109 401.4 957 30.8
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 2.0e-109 401.4 966 30.7
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 2.7e-109 401.0 958 31.1
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 2.7e-109 401.0 957 30.5
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 4.5e-109 400.2 961 30.9
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 4.5e-109 400.2 958 31.3
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 1.0e-108 399.1 961 30.6
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 2.9e-108 397.5 961 30.6
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 5.0e-108 396.7 957 29.6
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 8.6e-108 396.0 977 30.0
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 1.5e-107 395.2 957 30.2
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 5.5e-107 393.3 957 31.0
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 5.5e-107 393.3 992 29.5
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 1.6e-106 391.7 957 30.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 3.6e-106 390.6 959 30.3
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 6.1e-106 389.8 959 30.1
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 6.1e-106 389.8 959 29.5
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 1.0e-105 389.0 957 29.9
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 1.8e-105 388.3 959 29.5
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 1.5e-104 385.2 912 31.5
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 7.5e-104 382.9 910 31.2
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 7.5e-104 382.9 956 29.1
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.7e-103 380.6 959 29.1
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 9.5e-99 365.9 954 31.2
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 3.6e-98 364.0 957 28.2
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 2.6e-96 357.8 958 29.2
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 1.1e-94 352.4 959 28.4
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 1.1e-94 352.4 960 28.9
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 1.6e-93 348.6 911 29.9
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 1.7e-92 345.1 881 29.1
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 3.3e-91 340.9 1004 27.8
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 3.3e-91 340.9 1004 27.8
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.3e-89 334.7 1020 27.5
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 4.4e-88 330.5 883 29.3
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 7.0e-86 323.2 959 27.5
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 4.6e-85 320.5 880 28.4
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.7e-84 318.5 262 59.5
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 1.2e-82 312.4 278 56.5
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 2.8e-82 311.2 979 27.9
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.2e-79 301.6 281 55.5
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 8.3e-79 299.7 255 58.4
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 1.1e-78 299.3 243 59.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 2.4e-78 298.1 246 58.5
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 4.1e-78 297.4 221 63.8
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 2.1e-77 295.0 240 60.0
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 2.7e-77 294.7 869 28.3
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 3.5e-77 294.3 863 27.5
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 2.3e-76 291.6 272 54.0
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.1e-75 289.3 284 52.5
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.5e-75 288.9 246 58.1
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.4e-73 282.3 243 55.1
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 1.9e-70 271.9 272 52.2
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 9.0e-65 253.1 858 26.3
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 4.6e-61 240.7 269 47.6
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.0e-60 239.6 269 48.7
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 6.2e-58 230.3 933 24.1
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.0e-56 225.3 384 38.3
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 4.6e-53 214.2 198 55.1
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.3e-44 185.3 282 39.4
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 4.3e-43 181.0 172 55.2
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 4.8e-34 151.0 122 62.3
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 3.3e-19 101.7 81 58.0
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 3.7e-18 98.2 261 27.2
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 2.0e-16 92.4 396 21.7
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 8.2e-10 70.5 71 46.5
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 1.4e-09 69.7 246 24.0
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 7.7e-08 63.9 69 46.4
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 1.7e-07 62.8 101 32.7
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 2.9e-07 62.0 56 60.7
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 1.9e-06 59.3 50 62.0


User provided reference genes

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