Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0064s0074 Marchantia polymorpha HOM05D003618 ORTHO05D004302 2.2e-282 974.9 491 100.0
Mapoly0034s0078 Marchantia polymorpha HOM05D003618 ORTHO05D004302 4.2e-220 768.1 483 78.5
Pp3c24_8730 Physcomitrium patens HOM05D003618 ORTHO05D004302 2.3e-202 709.1 445 78.7
Pp3c8_12290 Physcomitrium patens HOM05D003618 ORTHO05D004302 9.6e-201 703.7 479 73.7
SMO348G0015 Selaginella moellendorffii HOM05D003618 ORTHO05D004302 5.3e-199 698.0 418 79.4
SEGI_37686 Sequoiadendron giganteum HOM05D003618 ORTHO05D004302 1.0e-197 693.7 416 78.6
CARHR276570 Cardamine hirsuta HOM05D003618 ORTHO05D004302 2.9e-197 692.2 420 78.1
AL8G39750 Arabidopsis lyrata HOM05D003618 ORTHO05D004302 3.2e-196 688.7 420 77.4
QL10p011706 Quercus lobata HOM05D003618 ORTHO05D004302 5.5e-196 688.0 418 76.8
Peaxi162Scf00017g02915 Petunia axillaris HOM05D003618 ORTHO05D004302 7.1e-196 687.6 426 76.8
Carub.0008s2351 Capsella rubella HOM05D003618 ORTHO05D004302 9.3e-196 687.2 421 77.0
C09p08850 Brassica napus HOM05D003618 ORTHO05D004302 1.6e-195 686.4 417 77.7
BolC9t53797H Brassica oleracea HOM05D003618 ORTHO05D004302 1.6e-195 686.4 417 77.7
AT5G62790 Arabidopsis thaliana HOM05D003618 ORTHO05D004302 3.5e-195 685.3 421 77.2
BcaC04g23393 Brassica carinata HOM05D003618 ORTHO05D004302 3.5e-195 685.3 417 77.7
Sp2g25950 Schrenkiella parvula HOM05D003618 ORTHO05D004302 3.5e-195 685.3 421 77.2
BcaB02g09693 Brassica carinata HOM05D003618 ORTHO05D004302 4.6e-195 684.9 421 77.0
BcaNung01381 Brassica carinata HOM05D003618 ORTHO05D004302 4.6e-195 684.9 420 77.1
Ciclev10020004m.g Citrus clementina HOM05D003618 ORTHO05D004302 6.0e-195 684.5 414 77.3
Haze_07469 Corylus avellana HOM05D003618 ORTHO05D004302 6.0e-195 684.5 414 77.5
A09p07850 Brassica napus HOM05D003618 ORTHO05D004302 1.0e-194 683.7 417 77.5
PSO170G5081 Papaver somniferum HOM05D003618 ORTHO05D004302 2.3e-194 682.6 413 78.5
Aqoxy3G02948 Aquilegia oxysepala HOM05D003618 ORTHO05D004302 3.0e-194 682.2 414 77.8
Solyc03g114340.3 Solanum lycopersicum HOM05D003618 ORTHO05D004302 3.9e-194 681.8 417 78.4
Sopen03g033440 Solanum pennellii HOM05D003618 ORTHO05D004302 3.9e-194 681.8 417 78.4
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 5.1e-194 681.4 416 78.1
Manes.06G104700 Manihot esculenta HOM05D003618 ORTHO05D004302 5.1e-194 681.4 416 77.2
Cfa019131 Carpinus fangiana HOM05D003618 ORTHO05D004302 6.7e-194 681.0 414 77.5
TAR629G0089 Trochodendron aralioides HOM05D003618 ORTHO05D004302 6.7e-194 681.0 413 78.0
CSS0045852 Camellia sinensis var. sinensis HOM05D003618 ORTHO05D004302 1.1e-193 680.2 416 77.2
PSO455G0039 Papaver somniferum HOM05D003618 ORTHO05D004302 1.1e-193 680.2 428 76.2
CiPaw.11G026400 Carya illinoinensis HOM05D003618 ORTHO05D004302 1.5e-193 679.9 416 76.0
Eucgr.B00316 Eucalyptus grandis HOM05D003618 ORTHO05D004302 1.5e-193 679.9 421 76.2
CDE07G0194 Ceratophyllum demersum HOM05D003618 ORTHO05D004302 1.9e-193 679.5 426 75.4
Atru.chr9.2476 Acer truncatum HOM05D003618 ORTHO05D004302 2.5e-193 679.1 427 75.9
Thhalv10004122m.g Eutrema salsugineum HOM05D003618 ORTHO05D004302 2.5e-193 679.1 431 75.4
Os01g0106900 Oryza sativa ssp. japonica HOM05D003618 ORTHO05D004302 2.5e-193 679.1 433 74.4
MSTRG.23128 Avicennia marina HOM05D003618 ORTHO05D004302 4.3e-193 678.3 416 78.4
A06p29560 Brassica napus HOM05D003618 ORTHO05D004302 4.3e-193 678.3 407 78.4
GSVIVG01007752001 Vitis vinifera HOM05D003618 ORTHO05D004302 4.3e-193 678.3 414 77.3
HanXRQChr05g0153451 Helianthus annuus HOM05D003618 ORTHO05D004302 5.7e-193 677.9 416 78.1
THA.LOC104818235 Tarenaya hassleriana HOM05D003618 ORTHO05D004302 5.7e-193 677.9 430 75.6
Nitab4.5_0007719g0010 Nicotiana tabacum HOM05D003618 ORTHO05D004302 1.3e-192 676.8 416 77.6
HanXRQChr09g0272201 Helianthus annuus HOM05D003618 ORTHO05D004302 1.6e-192 676.4 418 77.3
Lsat_1_v5_gn_5_14440 Lactuca sativa HOM05D003618 ORTHO05D004302 1.6e-192 676.4 437 74.8
Lalb_Chr13g0297811 Lupinus albus HOM05D003618 ORTHO05D004302 1.6e-192 676.4 487 69.6
Oeu035988.1 Olea europaea HOM05D003618 ORTHO05D004302 1.6e-192 676.4 417 77.0
Zm00001eb126690 Zea mays HOM05D003618 ORTHO05D004302 1.6e-192 676.4 407 79.1
MD14G1180500 Malus domestica HOM05D003618 ORTHO05D004302 2.2e-192 676.0 415 77.3
Manes.14G065900 Manihot esculenta HOM05D003618 ORTHO05D004302 2.2e-192 676.0 414 76.3
Prupe.5G174000 Prunus persica HOM05D003618 ORTHO05D004302 2.2e-192 676.0 423 76.1
RcHm_v2.0_Chr7g0193571 Rosa chinensis HOM05D003618 ORTHO05D004302 2.2e-192 676.0 421 76.0
Nitab4.5_0009783g0020 Nicotiana tabacum HOM05D003618 ORTHO05D004302 2.8e-192 675.6 416 77.6
SGA_v2.0_scaffold90G27940 Striga asiatica HOM05D003618 ORTHO05D004302 2.8e-192 675.6 416 77.2
TWI14G0558 Tripterygium wilfordii HOM05D003618 ORTHO05D004302 2.8e-192 675.6 482 68.5
Cc04_g14010 Coffea canephora HOM05D003618 ORTHO05D004302 3.7e-192 675.2 416 76.4
Oeu040829.1 Olea europaea HOM05D003618 ORTHO05D004302 4.8e-192 674.9 426 75.8
Migut.I00013 Erythranthe guttata HOM05D003618 ORTHO05D004302 6.3e-192 674.5 414 78.0
MD06G1174000 Malus domestica HOM05D003618 ORTHO05D004302 6.3e-192 674.5 415 77.1
TPR.G37486 Trifolium pratense HOM05D003618 ORTHO05D004302 6.3e-192 674.5 411 76.6
ATR0730G147 Amborella trichopoda HOM05D003618 ORTHO05D004302 1.4e-191 673.3 412 77.2
SalBow5G0347 Salvia bowleyana HOM05D003618 ORTHO05D004302 1.4e-191 673.3 414 78.7
SalBow5G5681 Salvia bowleyana HOM05D003618 ORTHO05D004302 1.4e-191 673.3 414 78.7
MSTRG.11450 Avicennia marina HOM05D003618 ORTHO05D004302 1.8e-191 672.9 417 77.0
Gohir.A09G171800 Gossypium hirsutum HOM05D003618 ORTHO05D004302 2.4e-191 672.5 418 76.1
Lj5A124T67 Lonicera japonica HOM05D003618 ORTHO05D004302 2.4e-191 672.5 420 75.5
Nn4g22770 Nelumbo nucifera HOM05D003618 ORTHO05D004302 2.4e-191 672.5 413 77.2
BraA09t36436Z Brassica rapa HOM05D003618 ORTHO05D004302 3.1e-191 672.2 440 73.6
FvH4_5g05300 Fragaria vesca HOM05D003618 ORTHO05D004302 3.1e-191 672.2 421 74.8
FAN18G3775 Fragaria x ananassa HOM05D003618 ORTHO05D004302 3.1e-191 672.2 428 74.3
Sabra15G0101400 Salix brachista HOM05D003618 ORTHO05D004302 3.1e-191 672.2 417 75.8
unitig_0.g1445 Utricularia gibba HOM05D003618 ORTHO05D004302 3.1e-191 672.2 430 75.3
Hund02742 Selenicereus undatus HOM05D003618 ORTHO05D004302 5.3e-191 671.4 419 76.6
Gohir.D09G167500 Gossypium hirsutum HOM05D003618 ORTHO05D004302 9.0e-191 670.6 418 75.6
Gorai.006G189200 Gossypium raimondii HOM05D003618 ORTHO05D004302 9.0e-191 670.6 418 76.1
arahy.Tifrunner.gnm1.ann1.2KV8GB Arachis hypogaea HOM05D003618 ORTHO05D004302 1.2e-190 670.2 415 76.1
arahy.Tifrunner.gnm1.ann1.9FL7A6 Arachis hypogaea HOM05D003618 ORTHO05D004302 1.2e-190 670.2 415 76.1
TAR622G0131 Trochodendron aralioides HOM05D003618 ORTHO05D004302 1.2e-190 670.2 426 74.9
Lalb_Chr07g0182731 Lupinus albus HOM05D003618 ORTHO05D004302 1.5e-190 669.8 415 77.3
ClCG06G017010 Citrullus lanatus HOM05D003618 ORTHO05D004302 2.0e-190 669.5 426 74.4
COL.COLO4_30036 Corchorus olitorius HOM05D003618 ORTHO05D004302 2.0e-190 669.5 419 75.7
Potri.012G080900 Populus trichocarpa HOM05D003618 ORTHO05D004302 2.0e-190 669.5 475 67.8
Sed0001158 Sechium edule HOM05D003618 ORTHO05D004302 2.0e-190 669.5 416 76.2
Sed0011107 Sechium edule HOM05D003618 ORTHO05D004302 2.6e-190 669.1 416 76.4
MELO3C026292.2 Cucumis melo HOM05D003618 ORTHO05D004302 3.4e-190 668.7 426 75.1
ECA232G0993 Erigeron canadensis HOM05D003618 ORTHO05D004302 3.4e-190 668.7 418 77.0
Glyma.05G037500 Glycine max HOM05D003618 ORTHO05D004302 4.5e-190 668.3 478 69.0
Medtr4g106870 Medicago truncatula HOM05D003618 ORTHO05D004302 4.5e-190 668.3 411 76.2
Ca_21917_v3 Cicer arietinum L. HOM05D003618 ORTHO05D004302 5.9e-190 667.9 487 68.4
BcaC01g02522 Brassica carinata HOM05D003618 ORTHO05D004302 1.0e-189 667.2 404 77.5
C03p63940 Brassica napus HOM05D003618 ORTHO05D004302 1.0e-189 667.2 404 77.5
BolC3t18648H Brassica oleracea HOM05D003618 ORTHO05D004302 1.0e-189 667.2 404 77.5
Potri.015G076200 Populus trichocarpa HOM05D003618 ORTHO05D004302 1.3e-189 666.8 417 75.5
vmacro19385 Vaccinium macrocarpon HOM05D003618 ORTHO05D004302 1.3e-189 666.8 436 73.9
CsaV3_1G001500 Cucumis sativus L. HOM05D003618 ORTHO05D004302 1.7e-189 666.4 426 74.4
CANSAT80G1130 Cannabis sativa HOM05D003618 ORTHO05D004302 2.2e-189 666.0 412 75.5
PGR083G1520 Punica granatum HOM05D003618 ORTHO05D004302 3.8e-189 665.2 421 75.8
BraA06t25902Z Brassica rapa HOM05D003618 ORTHO05D004302 8.5e-189 664.1 425 74.8
Rhsim08G0171900 Rhododendron simsii HOM05D003618 ORTHO05D004302 8.5e-189 664.1 451 71.6
Duzib205G1198 Durio zibethinus HOM05D003618 ORTHO05D004302 1.1e-188 663.7 480 68.3
DCAR_026133 Daucus carota HOM05D003618 ORTHO05D004302 1.4e-188 663.3 417 74.8
Phvul.003G200300 Phaseolus vulgaris HOM05D003618 ORTHO05D004302 1.4e-188 663.3 416 76.2
Migut.I00014 Erythranthe guttata HOM05D003618 ORTHO05D004302 1.9e-188 662.9 424 75.2
Lj4g0012807 Lotus japonicus HOM05D003618 ORTHO05D004302 3.2e-188 662.1 414 74.2
Dinv20656 Davidia involucrata HOM05D003618 ORTHO05D004302 4.2e-188 661.8 415 76.1
Lsat_1_v5_gn_4_75261 Lactuca sativa HOM05D003618 ORTHO05D004302 4.2e-188 661.8 416 74.5
Lalb_Chr12g0201571 Lupinus albus HOM05D003618 ORTHO05D004302 4.2e-188 661.8 503 66.6
VMungo1215G2328 Vigna mungo HOM05D003618 ORTHO05D004302 4.2e-188 661.8 417 75.5
HPP92_004862 Vanilla planifolia HOM05D003618 ORTHO05D004302 7.2e-188 661.0 408 76.0
Psat4g058000 Pisum sativum HOM05D003618 ORTHO05D004302 2.1e-187 659.4 480 68.5
Thecc.03G012400 Theobroma cacao HOM05D003618 ORTHO05D004302 3.6e-187 658.7 482 68.0
Gorai.007G001700 Gossypium raimondii HOM05D003618 ORTHO05D004302 4.6e-187 658.3 419 74.7
Gohir.A11G001200 Gossypium hirsutum HOM05D003618 ORTHO05D004302 1.0e-186 657.1 419 75.2
Glyma.17G089600 Glycine max HOM05D003618 ORTHO05D004302 3.0e-186 655.6 415 74.5
FAN04G2056 Fragaria x ananassa HOM05D003618 ORTHO05D004302 6.7e-186 654.4 470 68.1
Lj9A449G48 Lonicera japonica HOM05D003618 ORTHO05D004302 8.8e-186 654.1 523 63.7
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 1.1e-185 653.7 430 74.0
AUR62030965 Chenopodium quinoa HOM05D003618 ORTHO05D004302 2.0e-185 652.9 427 74.2
FAN13G0153 Fragaria x ananassa HOM05D003618 ORTHO05D004302 4.3e-185 651.7 470 67.7
Aa31LG11G890 Aethionema arabicum HOM05D003618 ORTHO05D004302 5.7e-185 651.4 430 72.8
FAN18G3061 Fragaria x ananassa HOM05D003618 ORTHO05D004302 1.3e-184 650.2 470 67.2
FAN08G0480 Fragaria x ananassa HOM05D003618 ORTHO05D004302 1.7e-184 649.8 470 67.7
MBI16_g32207_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 6.3e-184 647.9 417 74.3
Aa31LG11G900 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.1e-183 647.1 409 74.3
CANSAT80G1364 Cannabis sativa HOM05D003618 ORTHO05D004302 5.3e-183 644.8 417 71.7
AUR62008212 Chenopodium quinoa HOM05D003618 ORTHO05D004302 5.3e-183 644.8 421 73.6
MBI10_g14554_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 6.9e-183 644.4 414 74.9
Hund09436 Selenicereus undatus HOM05D003618 ORTHO05D004302 2.2e-181 639.4 426 69.7
arahy.Tifrunner.gnm1.ann1.NJJ8BU Arachis hypogaea HOM05D003618 ORTHO05D004302 1.9e-180 636.3 412 72.8
arahy.Tifrunner.gnm1.ann1.5ZTX8H Arachis hypogaea HOM05D003618 ORTHO05D004302 3.2e-180 635.6 412 72.8
Phvul.010G023000 Phaseolus vulgaris HOM05D003618 ORTHO05D004302 1.2e-179 633.6 417 72.9
TPR.G31563 Trifolium pratense HOM05D003618 ORTHO05D004302 3.6e-179 632.1 415 73.3
Lalb_Chr12g0209981 Lupinus albus HOM05D003618 ORTHO05D004302 1.8e-178 629.8 416 70.7
CBR_g11924 Chara braunii HOM05D003618 ORTHO05D004302 2.3e-178 629.4 410 74.6
Ciclev10019836m.g Citrus clementina HOM05D003618 ORTHO05D004302 5.1e-178 628.2 416 70.7
Lj3g0025861 Lotus japonicus HOM05D003618 ORTHO05D004302 1.5e-177 626.7 442 69.0
Glyma.16G089000 Glycine max HOM05D003618 ORTHO05D004302 4.4e-177 625.2 417 71.7
Ca_23215_v3 Cicer arietinum L. HOM05D003618 ORTHO05D004302 5.7e-177 624.8 415 72.5
VMungo0331G0859 Vigna mungo HOM05D003618 ORTHO05D004302 1.3e-176 623.6 417 71.9
Medtr8g012565 Medicago truncatula HOM05D003618 ORTHO05D004302 1.1e-175 620.5 428 70.6
PGSC0003DMG400024503 Solanum tuberosum HOM05D003618 ORTHO05D004302 1.4e-175 620.2 434 71.2
MBI10_g41914_MAGBIO Magnolia biondii HOM05D003618 ORTHO05D004302 3.1e-175 619.0 414 72.9
Cpa.g.sc76.64 Carica papaya HOM05D003618 ORTHO05D004302 6.5e-173 611.3 373 77.5
Cre12.g546050 Chlamydomonas reinhardtii HOM05D003618 ORTHO05D004302 1.4e-172 610.1 433 69.1
Duzib068G0560 Durio zibethinus HOM05D003618 ORTHO05D004302 1.6e-171 606.7 380 76.3
SGA_v2.0_scaffold25G10843 Striga asiatica HOM05D003618 ORTHO05D004302 3.8e-165 585.5 418 68.4
CDE06G1773 Ceratophyllum demersum HOM05D003618 ORTHO05D004302 1.5e-161 573.5 426 67.1
HanXRQChr16g0517311 Helianthus annuus HOM05D003618 ORTHO05D004302 2.2e-160 569.7 430 64.7
Aa31sc1732G20 Aethionema arabicum HOM05D003618 ORTHO05D004302 4.1e-159 565.5 347 76.7
PRCOL_00002139 Prasinoderma coloniale HOM05D003618 ORTHO05D004302 1.4e-154 550.4 416 65.6
Dinv02897 Davidia involucrata HOM05D003618 ORTHO05D004302 3.4e-153 545.8 323 80.8
CAN.G781.11 Capsicum annuum HOM05D003618 ORTHO05D004302 2.0e-150 536.6 313 81.8
Aa31sc1732G10 Aethionema arabicum HOM05D003618 ORTHO05D004302 1.5e-148 530.4 325 77.2
HanXRQChr05g0156211 Helianthus annuus HOM05D003618 ORTHO05D004302 2.1e-147 526.6 331 77.3
AagrBONN_evm.TU.Sc2ySwM_228.1199 Anthoceros agrestis HOM05D003618 ORTHO05D004302 3.7e-136 489.2 308 79.5
MCO15G646 Micromonas commoda HOM05D003618 ORTHO05D004302 1.1e-135 487.6 356 66.6
Sabra12G0057700 Salix brachista HOM05D003618 ORTHO05D004302 1.2e-131 474.2 412 60.2
Cc00_g09910 Coffea canephora HOM05D003618 ORTHO05D004302 7.3e-124 448.4 294 73.5
Sc12g0005340 Simmondsia chinensis HOM05D003618 ORTHO05D004302 1.3e-107 394.4 258 73.6
Psat4g204400 Pisum sativum HOM05D003618 ORTHO05D004302 4.9e-96 355.9 259 67.2
Actinidia33067 Actinidia chinensis HOM05D003618 ORTHO05D004302 7.1e-87 325.5 269 63.6
Zm00001eb334380 Zea mays HOM05D003618 ORTHO05D004302 4.1e-82 309.7 184 77.7
Gohir.D11G000766 Gossypium hirsutum HOM05D003618 ORTHO05D004302 1.5e-81 307.8 184 77.7
Sc12g0005330 Simmondsia chinensis HOM05D003618 ORTHO05D004302 8.2e-75 285.4 173 74.6
FvH4_4g01210 Fragaria vesca HOM05D003618 ORTHO05D004302 2.2e-72 277.3 263 56.7
Zm00001eb334370 Zea mays HOM05D003618 ORTHO05D004302 7.2e-71 272.3 174 75.3
Gohir.D11G000832 Gossypium hirsutum HOM05D003618 ORTHO05D004302 1.2e-62 245.0 177 66.7
Cc04_g14070 Coffea canephora HOM05D003618 ORTHO05D004302 8.8e-61 238.8 223 58.3
Lsat_1_v5_gn_0_46101 Lactuca sativa HOM05D003618 ORTHO05D004302 2.0e-60 237.7 355 38.6
VMungo0647G0692 Vigna mungo HOM05D003618 ORTHO05D004302 9.7e-60 235.3 164 72.6
Hund09437 Selenicereus undatus HOM05D003618 ORTHO05D004302 2.3e-53 214.2 396 37.6
FvH4_3g27741 Fragaria vesca HOM05D003618 ORTHO05D004302 1.0e-48 198.7 147 67.3
FvH4_1g09716 Fragaria vesca HOM05D003618 ORTHO05D004302 1.2e-38 165.2 153 58.2
FvH4_1g09717 Fragaria vesca HOM05D003618 ORTHO05D004302 2.8e-30 137.5 71 90.1
DCAR_016639 Daucus carota HOM05D003618 ORTHO05D003669 2.7e-25 120.9 75 78.7
FAN09G3822 Fragaria x ananassa HOM05D003618 ORTHO05D004302 4.9e-19 100.1 79 62.0
RcHm_v2.0_Chr1g0360281 Rosa chinensis HOM05D003618 ORTHO05D004302 1.2e-17 95.5 69 63.8
RcHm_v2.0_Chr2g0151191 Rosa chinensis HOM05D001812 ORTHO05D004302 2.3e-16 91.3 73 56.2
Cc00_g21160 Coffea canephora HOM05D003618 ORTHO05D153345 2.6e-12 77.8 47 72.3
Hma1.2p1_0549F.1_g176800 Hydrangea macrophylla HOM05D003618 ORTHO05D004302 2.9e-11 74.3 49 77.6
Cc00_g09880 Coffea canephora HOM05D003618 ORTHO05D004302 6.4e-11 73.2 37 86.5
SGA_v2.0_scaffold45G17201 Striga asiatica HOM05D003618 ORTHO05D404764 2.1e-09 68.2 148 39.9


User provided reference genes

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