Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 3.5e-239 831.2 433 100.0
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 1.2e-109 401.0 353 56.1
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 1.2e-48 198.4 181 54.1
Cre13.g572800 Chlamydomonas reinhardtii HOM05D028917 ORTHO05D023487 2.4e-38 164.1 454 31.3
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 2.8e-18 97.4 244 29.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 9.3e-14 82.4 315 26.3
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.3e-12 78.6 317 24.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 3.0e-12 77.4 324 25.0
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 6.6e-12 76.3 357 24.1
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.1e-11 75.5 289 23.5
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.3e-11 73.9 362 23.2
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 5.6e-11 73.2 320 25.0
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 5.6e-11 73.2 362 23.2
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 7.3e-11 72.8 280 25.0
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.6e-10 70.5 307 24.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 6.2e-10 69.7 284 23.9
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 6.2e-10 69.7 357 23.2
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 8.1e-10 69.3 279 26.2
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.1e-09 68.9 313 22.4
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.1e-09 68.9 315 25.1
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.1e-09 68.9 315 23.5
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.4e-09 68.6 313 23.6
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.4e-09 68.6 277 22.7
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 1.8e-09 68.2 265 27.5
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.4e-09 67.8 313 22.7
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 2.4e-09 67.8 306 25.2
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.4e-09 67.8 253 26.1
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 9.0e-09 65.9 282 23.4
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.2e-08 65.5 276 23.6
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.5e-08 65.1 237 24.5
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 2.0e-08 64.7 311 24.1
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 2.0e-08 64.7 325 22.5
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 3.4e-08 63.9 225 27.1
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 7.6e-08 62.8 284 22.9
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.7e-07 61.6 237 27.0
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.2e-07 61.2 285 24.2
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 6.4e-07 59.7 238 26.5
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.1e-06 58.9 283 22.3
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.1e-06 58.9 285 24.6


User provided reference genes

Program Settings