Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 3.4e-144 515.0 265 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.7e-87 326.6 245 66.1
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 1.1e-81 307.4 249 60.2
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 4.6e-80 302.0 225 64.4
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.1e-76 290.8 246 57.7
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 4.0e-76 288.9 246 57.3
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 2.0e-75 286.6 261 56.3
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.9e-74 282.7 238 59.2
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 9.2e-73 277.7 238 58.4
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 6.0e-72 275.0 238 57.1
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.3e-71 273.9 230 58.3
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.3e-71 273.1 237 57.8
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.1e-70 270.8 230 58.7
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.1e-70 270.8 239 56.9
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.1e-70 270.8 230 58.7
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.5e-70 270.4 238 57.1
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.9e-70 270.0 237 57.4
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.9e-70 270.0 230 57.8
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 4.3e-70 268.9 240 55.4
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 5.6e-70 268.5 230 57.0
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 5.6e-70 268.5 241 55.2
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 7.3e-70 268.1 241 55.2
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 9.5e-70 267.7 230 57.4
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 9.5e-70 267.7 243 54.3
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 1.2e-69 267.3 230 57.0
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.2e-69 267.3 230 56.5
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.6e-69 266.9 230 56.5
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 2.1e-69 266.5 247 51.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 2.1e-69 266.5 238 55.0
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 2.8e-69 266.2 230 57.0
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 2.8e-69 266.2 230 57.0
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.8e-69 266.2 240 55.8
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 4.7e-69 265.4 240 54.2
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 6.2e-69 265.0 239 55.6
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 6.2e-69 265.0 237 56.1
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 6.2e-69 265.0 237 56.1
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 6.2e-69 265.0 237 56.1
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 6.2e-69 265.0 237 55.3
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 8.1e-69 264.6 230 56.5
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 8.1e-69 264.6 230 56.5
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 8.1e-69 264.6 230 56.5
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 8.1e-69 264.6 230 55.7
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.1e-68 264.2 224 57.1
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 1.1e-68 264.2 227 57.7
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.1e-68 264.2 230 56.5
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.1e-68 264.2 238 54.2
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.4e-68 263.8 230 56.5
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.8e-68 263.5 237 54.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 2.3e-68 263.1 235 57.0
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 2.3e-68 263.1 229 55.9
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 3.1e-68 262.7 243 53.5
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 4.0e-68 262.3 243 55.1
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.2e-68 261.9 266 52.6
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 6.8e-68 261.5 237 55.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 8.9e-68 261.2 230 56.5
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 8.9e-68 261.2 243 53.5
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.9e-68 261.2 237 55.3
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 8.9e-68 261.2 237 55.3
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 8.9e-68 261.2 241 54.8
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.2e-67 260.8 240 54.6
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.2e-67 260.8 240 54.6
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.2e-67 260.8 237 54.4
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 1.5e-67 260.4 238 52.9
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 2.0e-67 260.0 230 56.1
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.6e-67 259.6 245 53.9
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 3.4e-67 259.2 253 53.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.4e-67 258.8 237 54.9
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 7.5e-67 258.1 225 56.0
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.3e-66 257.3 237 54.4
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.7e-66 256.9 245 53.1
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.2e-66 256.5 237 54.4
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.9e-66 256.1 223 56.5
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 2.9e-66 256.1 231 55.0
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 3.7e-66 255.8 231 54.5
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.4e-65 253.8 243 54.3
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.9e-65 253.4 232 53.4
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 4.1e-65 252.3 260 50.4
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 9.2e-65 251.1 231 54.1
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.5e-64 249.2 229 52.8
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.5e-64 249.2 235 53.6
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 3.5e-64 249.2 256 52.0
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 6.0e-64 248.4 262 50.0
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.0e-63 247.7 229 52.4
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 2.3e-63 246.5 236 53.0
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 7.3e-62 241.5 256 50.4
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 3.6e-61 239.2 232 51.7
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.4e-60 236.5 251 48.2
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 3.1e-60 236.1 280 46.8
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 6.8e-60 235.0 198 59.1
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 8.9e-60 234.6 234 52.6
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 8.9e-60 234.6 228 52.2
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 4.4e-59 232.3 230 52.2
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.6e-59 231.5 260 46.2
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.7e-58 230.3 209 56.0
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 2.7e-56 223.0 230 49.6
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 1.9e-54 216.9 201 55.2
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 3.3e-54 216.1 174 61.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.3e-54 214.9 206 54.4
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.3e-53 214.2 196 55.1
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.2e-50 203.4 196 53.6
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.2e-48 197.6 156 59.6
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.6e-48 197.2 276 41.3
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 1.5e-46 190.7 170 56.5
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.2e-45 185.3 296 37.5
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 6.2e-45 185.3 237 43.5
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.6e-40 170.6 198 47.0
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 3.5e-40 169.5 129 65.9
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 8.7e-39 164.9 172 50.6
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.8e-36 157.1 172 48.8
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.8e-36 157.1 172 48.8
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 9.0e-36 154.8 138 56.5
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 9.0e-36 154.8 198 44.4
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.3e-31 141.0 124 57.3
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 2.1e-24 117.1 123 52.8
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 4.1e-20 102.8 166 39.2
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.1e-17 94.7 85 51.8
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.4e-17 94.4 95 54.7
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.2e-16 91.3 66 63.6
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 3.3e-14 83.2 71 59.2
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 9.7e-14 81.6 63 55.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 8.2e-13 78.6 54 63.0
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.9e-10 70.1 166 29.5
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 2.1e-08 63.9 129 36.4
Cre14.g619613 Chlamydomonas reinhardtii HOM05D006316 ORTHO05D008032 4.7e-08 62.8 168 27.4
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 3.0e-07 60.1 75 41.3


User provided reference genes

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