Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.0e-101 372.9 247 100.0
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.1e-38 164.5 251 62.5
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 7.1e-35 151.8 187 68.4
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 3.5e-34 149.4 163 70.6
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.1e-32 144.4 226 51.3
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 9.6e-32 141.4 175 65.1
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 9.6e-32 141.4 183 60.7
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.3e-31 141.0 175 64.6
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 1.3e-31 141.0 175 64.6
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.1e-31 140.2 159 71.7
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 8.1e-31 138.3 179 66.5
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 8.1e-31 138.3 169 65.7
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.1e-30 137.9 175 66.3
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.8e-30 137.1 169 60.9
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 6.9e-30 135.2 175 66.3
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.5e-29 134.0 174 67.2
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 2.0e-29 133.7 184 58.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.0e-29 133.7 215 59.1
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 2.0e-29 133.7 179 64.2
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 2.6e-29 133.3 175 66.9
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 3.4e-29 132.9 243 56.4
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 4.5e-29 132.5 163 69.3
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 4.5e-29 132.5 191 57.6
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 5.8e-29 132.1 166 68.1
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 9.9e-29 131.3 162 68.5
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 9.9e-29 131.3 162 68.5
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 1.3e-28 131.0 175 65.1
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 2.2e-28 130.2 171 66.1
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.2e-28 130.2 179 63.7
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.2e-28 130.2 180 61.7
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 2.9e-28 129.8 196 56.1
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 3.8e-28 129.4 183 63.9
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.9e-28 129.0 162 67.9
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 4.9e-28 129.0 175 64.0
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 4.9e-28 129.0 168 64.3
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 8.4e-28 128.3 163 65.6
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 1.4e-27 127.5 167 64.7
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.4e-27 127.5 169 66.3
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 2.4e-27 126.7 160 70.0
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 2.4e-27 126.7 164 67.1
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 4.2e-27 125.9 162 68.5
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 4.2e-27 125.9 228 53.5
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 5.5e-27 125.6 207 50.7
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 9.3e-27 124.8 167 64.7
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 1.2e-26 124.4 166 66.3
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 1.6e-26 124.0 163 67.5
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 2.1e-26 123.6 159 64.8
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 2.1e-26 123.6 211 54.0
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 2.7e-26 123.2 167 65.3
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 4.6e-26 122.5 158 69.0
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 4.6e-26 122.5 163 67.5
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 4.6e-26 122.5 162 66.0
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 4.6e-26 122.5 167 64.7
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 6.0e-26 122.1 168 66.7
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 6.0e-26 122.1 166 62.0
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 6.0e-26 122.1 163 66.9
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 7.9e-26 121.7 154 69.5
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 7.9e-26 121.7 175 62.9
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.8e-25 120.6 164 66.5
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 1.8e-25 120.6 167 64.7
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 5.1e-25 119.0 181 60.8
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 6.7e-25 118.6 192 61.5
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 8.7e-25 118.2 167 65.3
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.5e-24 117.5 142 74.6
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.9e-24 117.1 178 61.8
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 1.9e-24 117.1 177 61.0
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.9e-24 117.1 222 54.5
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 3.3e-24 116.3 167 64.1
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 4.3e-24 115.9 213 56.3
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 5.6e-24 115.5 244 51.6
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 7.4e-24 115.2 164 62.2
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 7.4e-24 115.2 244 52.5
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 9.6e-24 114.8 141 75.2
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 1.6e-23 114.0 159 59.7
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.7e-23 112.8 187 42.8
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.1e-22 111.3 166 57.8
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 6.9e-22 108.6 170 55.9
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 9.0e-22 108.2 181 54.7
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.5e-21 107.5 162 59.9
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.5e-21 107.5 164 62.2
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.5e-21 107.5 164 62.2
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.5e-21 107.5 164 62.2
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 2.0e-21 107.1 74 67.6
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 2.0e-21 107.1 160 61.2
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.3e-20 104.4 194 58.2
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.3e-20 104.4 147 67.3
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 1.3e-20 104.4 230 49.6
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 6.5e-20 102.1 145 67.6
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.1e-19 101.3 72 65.3
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.4e-19 100.9 172 57.0
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.2e-18 97.8 168 60.7
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 7.9e-18 95.1 69 63.8
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 3.0e-17 93.2 164 59.8
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 5.1e-17 92.4 164 57.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 5.1e-17 92.4 164 57.9
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.1e-16 91.3 164 57.3
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 4.3e-16 89.4 164 56.7
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 6.3e-15 85.5 164 57.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 4.1e-14 82.8 233 48.1
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 4.1e-14 82.8 175 52.0
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 3.4e-13 79.7 49 75.5
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.0e-12 78.2 62 58.1
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 6.5e-12 75.5 43 79.1
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 8.4e-12 75.1 199 52.8
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 1.1e-11 74.7 126 69.0
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.1e-11 74.7 47 72.3
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.2e-11 72.8 53 58.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 5.5e-11 72.4 130 36.9
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 3.5e-10 69.7 54 63.0
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 3.5e-10 69.7 164 59.8
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.0e-09 68.2 71 46.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.5e-08 64.3 37 75.7
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.7e-07 59.7 34 79.4
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 1.4e-06 57.8 48 54.2


User provided reference genes

Program Settings