Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 4.6e-222 774.2 392 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 1.8e-120 436.8 417 55.2
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.0e-104 382.9 395 50.4
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 2.2e-91 340.1 318 53.5
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 3.6e-89 332.8 355 45.6
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.2e-86 323.6 313 50.2
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 2.2e-86 323.6 313 50.2
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 6.5e-75 285.4 284 50.0
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 3.0e-72 276.6 316 43.4
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 5.2e-72 275.8 347 40.1
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 5.2e-72 275.8 326 42.6
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 2.6e-71 273.5 362 39.8
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 7.5e-71 271.9 366 38.3
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 4.8e-70 269.2 315 41.0
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 8.3e-70 268.5 334 41.3
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 1.8e-69 267.3 359 39.3
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 3.1e-69 266.5 324 41.7
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 7.0e-69 265.4 285 45.3
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 7.0e-69 265.4 325 42.2
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 9.1e-69 265.0 330 41.5
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 9.1e-69 265.0 315 41.9
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 1.2e-68 264.6 330 41.2
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 2.0e-68 263.8 325 40.0
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 2.0e-68 263.8 330 41.2
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 5.9e-68 262.3 335 40.9
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 5.9e-68 262.3 333 41.4
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 5.9e-68 262.3 333 40.8
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 7.7e-68 261.9 361 39.3
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 7.7e-68 261.9 333 40.5
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 1.3e-67 261.2 301 41.5
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 1.3e-67 261.2 334 41.0
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 1.3e-67 261.2 332 39.5
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 1.7e-67 260.8 315 42.2
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.7e-67 260.8 325 40.0
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 2.3e-67 260.4 344 40.1
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 2.9e-67 260.0 337 40.9
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 5.0e-67 259.2 340 40.0
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 5.0e-67 259.2 293 44.7
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 6.5e-67 258.8 270 46.7
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 8.6e-67 258.5 346 40.2
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 8.6e-67 258.5 332 40.4
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.6e-67 258.5 337 40.1
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 1.1e-66 258.1 335 40.3
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 1.1e-66 258.1 268 45.5
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 1.1e-66 258.1 332 38.6
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 1.5e-66 257.7 271 45.0
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 2.5e-66 256.9 346 39.6
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 3.2e-66 256.5 268 45.1
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.2e-66 256.1 332 38.9
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 5.5e-66 255.8 293 43.0
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 5.5e-66 255.8 339 39.2
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 1.2e-65 254.6 341 39.0
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 1.2e-65 254.6 330 40.6
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.6e-65 254.2 378 36.8
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 1.6e-65 254.2 339 40.4
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 2.1e-65 253.8 322 40.7
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 2.8e-65 253.4 324 40.7
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 3.6e-65 253.1 332 38.0
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 6.1e-65 252.3 340 39.4
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.0e-64 251.5 386 39.9
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 1.0e-64 251.5 331 38.1
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 1.4e-64 251.1 268 44.4
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 6.8e-64 248.8 355 42.3
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 6.8e-64 248.8 267 43.8
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 2.0e-63 247.3 326 40.5
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 2.0e-63 247.3 311 39.2
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 2.6e-63 246.9 315 41.3
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.6e-63 246.9 348 37.4
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 3.4e-63 246.5 315 41.3
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 3.4e-63 246.5 355 42.0
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 4.4e-63 246.1 329 39.2
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 5.7e-63 245.7 347 39.2
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.5e-63 245.4 337 40.1
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 9.8e-63 245.0 380 40.3
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 2.2e-62 243.8 289 41.9
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 2.2e-62 243.8 342 37.7
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 2.2e-62 243.8 318 38.1
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 2.8e-62 243.4 380 40.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 8.3e-62 241.9 342 37.7
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 1.4e-61 241.1 304 40.5
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 2.4e-61 240.4 336 39.3
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 3.1e-61 240.0 265 47.2
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 3.1e-61 240.0 322 38.2
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 5.4e-61 239.2 334 36.8
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 5.4e-61 239.2 358 36.6
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 7.0e-61 238.8 334 36.8
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 1.2e-60 238.0 316 38.6
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 1.2e-60 238.0 337 37.1
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 2.7e-60 236.9 282 41.8
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 7.8e-60 235.3 361 35.5
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.0e-59 232.6 337 36.2
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 1.5e-58 231.1 353 36.0
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 1.9e-58 230.7 344 35.2
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 4.3e-58 229.6 328 35.7
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 5.6e-58 229.2 369 34.4
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 5.6e-58 229.2 364 35.2
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.1e-57 227.3 358 34.1
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 2.8e-57 226.9 304 39.1
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 4.7e-57 226.1 322 37.0
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 4.7e-57 226.1 359 35.9
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 6.1e-57 225.7 347 36.3
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.8e-56 224.2 335 34.9
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 1.5e-55 221.1 350 33.4
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 2.0e-55 220.7 345 33.6
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 3.4e-55 219.9 346 33.5
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 9.8e-55 218.4 345 35.1
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 9.8e-55 218.4 323 33.7
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 8.3e-54 215.3 314 38.2
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 1.2e-52 211.5 228 45.2
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.6e-52 211.1 357 32.8
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.0e-52 210.7 269 39.4
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 4.6e-52 209.5 344 32.6
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 1.0e-51 208.4 344 32.6
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.6e-51 205.7 337 36.2
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 1.9e-50 204.1 314 36.3
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 9.5e-50 201.8 346 35.0
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 2.1e-49 200.7 270 38.1
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 8.0e-49 198.7 288 38.2
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 1.1e-48 198.4 362 32.6
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.3e-48 197.2 281 36.3
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.2e-48 196.1 286 35.3
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 2.6e-47 193.7 296 35.5
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 9.8e-47 191.8 345 33.6
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 8.3e-46 188.7 353 34.0
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 8.3e-46 188.7 358 33.8
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.1e-45 188.3 224 41.5
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 1.9e-45 187.6 389 33.4
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 1.9e-45 187.6 368 31.8
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 2.4e-45 187.2 346 32.7
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 5.4e-45 186.0 331 33.8
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 7.0e-45 185.7 346 32.7
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 1.2e-44 184.9 254 38.6
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 2.0e-44 184.1 341 34.6
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 2.0e-44 184.1 371 32.9
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 4.6e-44 183.0 385 29.6
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 7.8e-44 182.2 338 33.4
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 7.8e-44 182.2 338 33.4
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 3.0e-43 180.3 385 29.4
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 6.6e-43 179.1 385 29.1
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 6.6e-43 179.1 275 36.0
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 1.1e-42 178.3 338 32.0
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.5e-42 177.9 269 32.7
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 2.5e-42 177.2 353 32.3
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 2.5e-42 177.2 315 31.7
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 9.5e-42 175.3 326 31.9
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 9.5e-42 175.3 317 33.1
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 2.1e-41 174.1 343 32.1
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 2.8e-41 173.7 210 43.3
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 3.6e-41 173.3 343 32.1
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 4.7e-41 172.9 268 35.4
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 1.4e-40 171.4 284 32.7
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 8.9e-40 168.7 244 37.7
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.6e-39 167.2 242 37.2
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 4.9e-38 162.9 242 36.4
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 7.1e-37 159.1 205 38.0
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.2e-36 158.3 293 31.4
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 3.9e-35 153.3 202 39.6
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 5.6e-34 149.4 174 40.8
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.4e-32 144.8 191 39.3
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 8.4e-30 135.6 224 33.9
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 5.1e-27 126.3 134 43.3
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 8.4e-22 109.0 165 37.6
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.1e-18 98.6 139 41.0
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 2.5e-18 97.4 145 35.2
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 1.8e-16 91.3 87 48.3
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 4.0e-16 90.1 170 26.5
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 4.0e-16 90.1 128 39.1
PRCOL_00002048 Prasinoderma coloniale HOM05D000861 ORTHO05D004749 1.7e-14 84.7 259 25.9
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 8.4e-14 82.4 118 39.0
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 7.1e-13 79.3 71 46.5
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.8e-08 64.7 107 33.6
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 5.3e-08 63.2 60 45.0
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.7e-06 58.2 79 40.5
CBR_g4192 Chara braunii HOM05D000019 ORTHO05D022303 2.2e-06 57.8 94 29.8


User provided reference genes

Program Settings