Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 5.0e-96 354.4 172 100.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 5.1e-64 248.1 171 66.7
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 6.6e-64 247.7 169 67.5
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 6.6e-64 247.7 169 67.5
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 1.1e-63 246.9 168 67.3
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.9e-63 246.1 168 66.7
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.9e-63 246.1 168 66.7
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 3.3e-63 245.4 163 68.1
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 4.3e-63 245.0 168 66.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.3e-63 245.0 168 66.7
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 4.3e-63 245.0 168 66.1
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 7.3e-63 244.2 169 67.5
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 7.3e-63 244.2 164 67.7
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 9.6e-63 243.8 169 66.3
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.2e-62 243.4 170 65.3
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.8e-62 242.3 169 65.7
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 2.8e-62 242.3 165 66.7
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 3.6e-62 241.9 165 66.7
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 4.7e-62 241.5 169 63.9
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.7e-62 241.5 170 64.7
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 4.7e-62 241.5 164 66.5
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 6.2e-62 241.1 164 66.5
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 6.2e-62 241.1 164 67.1
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 8.1e-62 240.7 168 66.7
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 8.1e-62 240.7 164 67.1
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 8.1e-62 240.7 165 66.1
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 8.1e-62 240.7 164 67.1
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.1e-61 240.4 165 66.1
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 1.4e-61 240.0 168 66.1
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 1.4e-61 240.0 164 67.1
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.8e-61 239.6 170 64.7
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.8e-61 239.6 170 64.7
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 2.4e-61 239.2 164 67.7
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 2.4e-61 239.2 168 66.1
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 2.4e-61 239.2 165 66.7
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 3.1e-61 238.8 169 64.5
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 3.1e-61 238.8 165 66.7
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 3.1e-61 238.8 165 66.7
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 3.1e-61 238.8 175 64.0
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 3.1e-61 238.8 168 65.5
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 3.1e-61 238.8 170 64.7
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 4.0e-61 238.4 163 66.9
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 5.2e-61 238.0 168 63.7
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 5.2e-61 238.0 168 63.7
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 5.2e-61 238.0 168 63.7
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 5.2e-61 238.0 164 65.9
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 6.9e-61 237.7 169 62.7
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 6.9e-61 237.7 170 63.5
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 9.0e-61 237.3 167 65.3
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 9.0e-61 237.3 169 63.3
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 1.2e-60 236.9 165 64.2
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 1.2e-60 236.9 165 64.2
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 1.2e-60 236.9 165 64.2
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.2e-60 236.9 170 64.1
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.2e-60 236.9 163 66.3
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.5e-60 236.5 170 63.5
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.5e-60 236.5 169 64.5
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 2.0e-60 236.1 168 63.1
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 2.6e-60 235.7 168 63.7
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.6e-60 235.7 170 63.5
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 2.6e-60 235.7 164 65.2
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.6e-60 235.7 160 68.1
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 4.4e-60 235.0 163 66.3
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.4e-60 235.0 163 66.9
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 4.4e-60 235.0 164 65.9
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 5.8e-60 234.6 169 63.3
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 5.8e-60 234.6 169 63.3
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 5.8e-60 234.6 164 65.9
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 9.9e-60 233.8 169 66.3
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 9.9e-60 233.8 176 62.5
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.3e-59 233.4 164 64.6
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.7e-59 233.0 169 62.7
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.7e-59 233.0 164 66.5
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 2.2e-59 232.6 163 64.4
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 2.2e-59 232.6 163 64.4
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.2e-59 232.6 168 62.5
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 2.9e-59 232.3 164 64.6
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 2.9e-59 232.3 164 63.4
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 3.8e-59 231.9 164 63.4
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 3.8e-59 231.9 164 64.0
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 6.4e-59 231.1 164 62.8
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.1e-58 230.3 164 62.2
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.4e-58 229.9 167 61.7
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 4.2e-58 228.4 164 64.0
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 5.4e-58 228.0 163 64.4
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 4.6e-57 224.9 156 66.0
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 6.0e-57 224.6 172 61.6
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 7.8e-57 224.2 166 60.8
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 7.8e-57 224.2 197 55.8
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 1.1e-55 220.3 163 63.2
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 4.8e-54 214.9 199 53.3
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 3.1e-53 212.2 173 59.0
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.8e-51 205.3 144 66.0
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 6.0e-49 198.0 168 56.5
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.4e-45 186.8 176 51.7
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 1.4e-45 186.8 164 54.9
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 7.6e-44 181.0 146 61.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 9.9e-44 180.6 131 62.6
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 6.0e-41 171.4 164 53.0
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 6.0e-41 171.4 126 61.1
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 6.7e-40 167.9 180 49.4
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 1.3e-38 163.7 116 65.5
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 3.1e-37 159.1 116 60.3
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 4.0e-37 158.7 175 49.7
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 5.8e-36 154.8 114 59.6
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 3.8e-35 152.1 110 60.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 3.8e-35 152.1 114 57.0
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 3.8e-35 152.1 146 52.7
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 6.5e-35 151.4 111 61.3
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 6.0e-33 144.8 96 70.8
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.0e-32 144.1 109 61.5
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.3e-30 137.1 97 64.9
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 4.8e-30 135.2 97 66.0
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.0e-19 100.9 151 40.4
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 2.0e-15 86.7 167 32.9
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 5.7e-15 85.1 177 31.6
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 1.4e-13 80.5 52 69.2
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 3.4e-12 75.9 167 28.7
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 7.7e-12 74.7 46 71.7
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 3.0e-08 62.8 66 43.9


User provided reference genes

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