Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 0.0e+00 1258.0 635 100.0
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 9.0e-191 671.0 637 54.9
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.3e-181 640.6 640 51.2
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 4.2e-180 635.6 642 51.9
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 4.2e-180 635.6 643 51.3
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 4.6e-179 632.1 644 50.8
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.0e-178 630.9 638 50.8
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 2.3e-178 629.8 638 51.3
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 5.1e-178 628.6 644 49.7
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 5.1e-178 628.6 638 50.6
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.1e-177 627.5 633 50.4
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.5e-177 627.1 638 50.8
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.5e-177 626.3 641 50.9
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 5.6e-177 625.2 638 50.2
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 7.4e-177 624.8 644 50.3
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 9.6e-177 624.4 640 50.2
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 9.6e-177 624.4 640 50.2
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.3e-176 624.0 641 49.8
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.3e-176 624.0 640 50.0
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.6e-176 623.6 640 49.8
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.6e-176 623.6 639 50.4
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 2.8e-176 622.9 609 55.3
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 2.8e-176 622.9 639 49.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 2.8e-176 622.9 638 50.8
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 2.8e-176 622.9 640 50.8
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 5.3e-175 618.6 635 50.2
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 5.3e-175 618.6 638 49.1
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 9.0e-175 617.8 644 49.5
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.2e-174 617.5 645 49.8
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 5.8e-174 615.1 638 49.7
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 5.8e-174 615.1 639 49.9
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 9.9e-174 614.4 639 50.5
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.3e-173 614.0 639 49.3
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.7e-173 613.6 643 49.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.7e-173 613.6 641 49.8
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 2.2e-173 613.2 636 49.5
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.2e-173 613.2 641 50.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.9e-173 612.8 642 48.8
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 2.9e-173 612.8 646 49.5
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 3.8e-173 612.5 641 50.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 4.9e-173 612.1 643 49.6
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 6.4e-173 611.7 642 49.7
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.1e-172 610.9 686 47.7
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.4e-172 610.5 638 49.1
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 1.9e-172 610.1 639 48.7
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.9e-172 610.1 643 50.2
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 9.3e-172 607.8 639 49.0
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.6e-171 607.1 639 50.2
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 2.1e-171 606.7 631 53.7
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 3.5e-171 605.9 640 49.1
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 6.0e-171 605.1 643 50.4
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 3.0e-170 602.8 610 51.3
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 3.9e-170 602.4 644 50.3
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 5.1e-170 602.1 606 51.3
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 6.7e-170 601.7 643 49.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 4.3e-169 599.0 636 49.2
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 7.4e-169 598.2 642 49.2
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 7.4e-169 598.2 649 49.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.8e-168 596.3 628 49.7
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.8e-168 595.5 636 48.6
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 8.2e-168 594.7 624 50.6
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 8.2e-168 594.7 646 48.6
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 6.9e-167 591.7 660 47.1
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.5e-166 590.5 623 49.9
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 3.4e-166 589.3 639 47.6
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.7e-165 587.0 646 49.2
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 3.8e-165 585.9 629 48.6
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 3.8e-165 585.9 612 50.7
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 2.5e-164 583.2 641 49.1
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 2.5e-164 583.2 641 49.1
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 2.5e-164 583.2 637 48.7
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 7.1e-164 581.6 636 48.1
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.5e-163 579.3 639 47.7
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 3.5e-163 579.3 642 48.1
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 3.5e-163 579.3 635 48.5
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 1.0e-162 577.8 642 48.3
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 3.9e-162 575.9 646 49.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 5.1e-162 575.5 639 47.7
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 5.7e-161 572.0 630 47.5
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.3e-160 570.9 643 47.4
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 2.8e-160 569.7 585 49.7
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.1e-159 567.8 647 46.8
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.3e-159 565.5 640 47.0
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 4.5e-158 562.4 643 46.7
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 2.2e-157 560.1 645 46.8
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 8.5e-157 558.1 587 50.9
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.1e-156 557.8 602 47.7
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 3.2e-156 556.2 642 46.3
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 2.7e-155 553.1 676 46.6
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 7.9e-155 551.6 597 49.4
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 5.7e-153 545.4 504 54.2
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 3.2e-148 529.6 578 48.4
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 3.2e-148 529.6 640 45.6
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.7e-144 517.3 616 44.2
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.5e-142 510.8 641 43.7
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 2.4e-127 460.3 456 53.1
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 8.3e-120 435.3 459 48.4
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 3.5e-118 429.9 457 48.6
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 4.0e-114 416.4 776 35.8
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.6e-110 404.4 410 52.4
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.0e-109 401.7 410 49.3
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 8.6e-109 398.7 426 49.1
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 8.9e-90 335.5 428 44.4
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 3.9e-69 266.9 624 32.1
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 3.9e-69 266.9 430 39.8
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 6.7e-61 239.6 285 45.3
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 3.2e-39 167.5 176 48.9
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.8e-37 161.8 187 46.0
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.8e-32 144.1 150 52.7
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.0e-24 119.4 229 33.2
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.1e-20 105.9 72 65.3
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 7.0e-18 96.7 164 39.6
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 7.7e-09 66.6 90 38.9
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.0e-08 66.2 53 58.5
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 5.5e-07 60.5 86 37.2


User provided reference genes

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