Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 4.3e-150 534.6 272 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 4.6e-59 232.3 212 59.9
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 7.8e-51 204.9 206 52.4
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 1.7e-50 203.8 256 47.3
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.5e-49 199.9 198 51.5
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 5.6e-49 198.7 196 54.6
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 9.5e-49 198.0 192 52.1
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 2.1e-48 196.8 196 54.1
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 2.1e-48 196.8 190 51.6
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 2.8e-48 196.4 204 53.9
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 3.6e-48 196.1 193 52.8
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 3.6e-48 196.1 195 52.3
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 3.6e-48 196.1 206 50.5
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 3.6e-48 196.1 206 50.5
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 4.7e-48 195.7 194 52.1
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 4.7e-48 195.7 194 52.6
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 6.2e-48 195.3 193 52.3
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 6.2e-48 195.3 206 50.5
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 1.1e-47 194.5 200 50.5
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 1.1e-47 194.5 199 50.3
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 1.1e-47 194.5 190 53.7
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 1.4e-47 194.1 197 52.3
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 1.4e-47 194.1 197 52.3
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 1.4e-47 194.1 197 52.3
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.4e-47 194.1 207 48.8
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 1.4e-47 194.1 194 50.5
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.4e-47 194.1 190 53.7
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 1.4e-47 194.1 190 53.7
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 1.8e-47 193.7 188 53.7
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 1.8e-47 193.7 191 51.8
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 1.8e-47 193.7 198 52.5
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 2.3e-47 193.4 201 51.2
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 2.3e-47 193.4 201 51.2
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 3.1e-47 193.0 201 50.7
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.1e-47 193.0 190 53.7
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 4.0e-47 192.6 191 55.0
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 5.2e-47 192.2 193 51.8
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 5.2e-47 192.2 193 52.3
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 8.9e-47 191.4 199 52.8
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 8.9e-47 191.4 195 51.3
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 1.2e-46 191.0 199 51.3
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 1.2e-46 191.0 211 50.7
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 1.5e-46 190.7 200 51.5
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 1.5e-46 190.7 199 51.8
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 2.0e-46 190.3 192 51.6
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 2.0e-46 190.3 188 51.1
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.0e-46 190.3 195 50.3
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 2.0e-46 190.3 195 50.8
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 2.0e-46 190.3 229 46.3
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 2.0e-46 190.3 196 50.0
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 3.4e-46 189.5 196 52.6
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 3.4e-46 189.5 196 52.6
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 3.4e-46 189.5 192 51.6
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 3.4e-46 189.5 200 50.5
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 3.4e-46 189.5 194 50.5
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 4.4e-46 189.1 191 52.4
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 4.4e-46 189.1 196 51.5
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 4.4e-46 189.1 190 52.1
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 5.8e-46 188.7 192 52.1
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 7.5e-46 188.3 195 50.3
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 7.5e-46 188.3 196 50.5
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 9.8e-46 188.0 199 49.7
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 1.3e-45 187.6 194 51.0
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 1.7e-45 187.2 210 48.1
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 1.7e-45 187.2 186 53.2
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 2.2e-45 186.8 196 49.0
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 2.9e-45 186.4 173 53.8
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 3.7e-45 186.0 194 51.0
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 3.7e-45 186.0 192 50.0
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 3.7e-45 186.0 195 49.7
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 3.7e-45 186.0 198 50.0
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 3.7e-45 186.0 232 46.1
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 4.9e-45 185.7 192 50.5
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 4.9e-45 185.7 197 49.2
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 4.9e-45 185.7 205 48.8
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 6.4e-45 185.3 197 49.2
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 6.4e-45 185.3 188 53.2
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 8.3e-45 184.9 191 50.3
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 1.1e-44 184.5 197 49.2
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 1.4e-44 184.1 195 50.3
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 1.4e-44 184.1 196 49.0
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 1.9e-44 183.7 191 50.3
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 1.9e-44 183.7 195 51.8
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 1.9e-44 183.7 195 50.3
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 2.4e-44 183.3 207 46.9
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 2.4e-44 183.3 196 50.0
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.4e-44 183.3 196 50.0
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 3.2e-44 183.0 190 50.5
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 5.4e-44 182.2 194 50.5
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 5.4e-44 182.2 179 53.6
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 9.2e-44 181.4 201 49.8
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 1.2e-43 181.0 176 52.8
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 3.5e-43 179.5 198 48.5
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 4.6e-43 179.1 191 50.8
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 6.0e-43 178.7 211 46.4
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 1.0e-42 177.9 200 50.0
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.3e-42 176.8 203 47.3
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 3.9e-42 176.0 179 52.0
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 6.6e-42 175.3 186 51.6
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 1.5e-41 174.1 190 47.4
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 3.6e-40 169.5 218 45.0
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.4e-39 167.5 236 41.5
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 1.8e-39 167.2 141 56.7
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 3.1e-39 166.4 128 60.2
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 3.1e-39 166.4 178 48.3
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 8.9e-39 164.9 127 61.4
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 8.9e-39 164.9 205 44.9
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 5.8e-38 162.2 115 65.2
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 7.6e-38 161.8 191 47.1
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 3.3e-33 146.4 134 55.2
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 2.7e-27 126.7 146 47.9
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 3.1e-23 113.2 71 71.8
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 1.1e-20 104.8 186 36.0
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 3.2e-20 103.2 102 53.9
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 6.0e-19 99.0 102 52.0
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 2.3e-18 97.1 61 68.9
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 3.1e-15 86.7 145 37.2
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 6.9e-15 85.5 56 69.6
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 1.7e-13 80.9 50 70.0
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 8.1e-08 62.0 66 48.5


User provided reference genes

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