Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 1.1e-237 827.0 511 100.0
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 7.0e-64 249.6 419 46.3
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 5.0e-62 243.4 422 49.1
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.6e-36 158.7 388 45.1
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.6e-36 157.5 388 44.8
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 3.6e-36 157.5 384 40.4
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 8.1e-36 156.4 372 41.4
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 1.1e-35 156.0 383 38.4
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 6.8e-35 153.3 383 38.6
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.2e-34 152.5 459 36.2
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 1.5e-34 152.1 386 39.1
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 5.8e-34 150.2 381 28.6
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 5.8e-34 150.2 372 45.2
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.7e-33 148.7 366 41.0
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 2.2e-33 148.3 373 44.0
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 2.2e-33 148.3 378 40.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 2.9e-33 147.9 384 42.2
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.9e-33 147.9 393 28.0
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 3.8e-33 147.5 380 40.8
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.9e-33 147.1 383 39.7
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 4.9e-33 147.1 387 36.7
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 6.4e-33 146.7 393 37.9
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 6.4e-33 146.7 385 39.5
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 6.4e-33 146.7 383 37.6
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 8.4e-33 146.4 367 43.6
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 8.4e-33 146.4 372 41.1
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.9e-32 145.2 384 39.8
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.9e-32 145.2 374 45.2
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 2.4e-32 144.8 383 27.2
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.2e-32 144.4 387 38.2
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 3.2e-32 144.4 385 40.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 4.1e-32 144.1 384 39.6
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 5.4e-32 143.7 370 43.2
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 5.4e-32 143.7 373 43.4
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 9.2e-32 142.9 371 43.4
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 1.6e-31 142.1 373 43.4
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 1.6e-31 142.1 374 40.9
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 1.0e-30 139.4 386 38.9
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.3e-30 139.0 380 42.6
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 1.3e-30 139.0 374 43.9
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 2.3e-30 138.3 374 41.2
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 2.3e-30 138.3 414 41.1
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.3e-30 138.3 367 42.2
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 3.0e-30 137.9 360 40.3
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 3.0e-30 137.9 367 36.0
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 5.1e-30 137.1 374 44.1
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 5.1e-30 137.1 370 43.2
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 5.1e-30 137.1 338 40.8
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 8.7e-30 136.3 383 37.9
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 8.7e-30 136.3 421 40.1
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.1e-29 136.0 398 25.9
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.9e-29 135.2 372 44.1
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.9e-29 135.2 348 41.1
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.9e-29 135.2 375 38.4
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 3.3e-29 134.4 369 43.9
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 3.3e-29 134.4 373 38.6
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 4.3e-29 134.0 360 44.4
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 4.3e-29 134.0 372 44.1
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 4.3e-29 134.0 348 29.0
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 5.6e-29 133.7 381 39.6
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 5.6e-29 133.7 373 42.6
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 9.6e-29 132.9 354 43.5
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 9.6e-29 132.9 354 43.5
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 9.6e-29 132.9 370 38.6
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.6e-28 132.1 375 38.4
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 1.6e-28 132.1 374 43.6
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.1e-28 131.7 419 40.6
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 2.1e-28 131.7 333 45.3
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 2.1e-28 131.7 379 42.5
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 2.8e-28 131.3 348 42.2
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 3.6e-28 131.0 349 41.5
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.6e-28 131.0 350 33.7
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 6.2e-28 130.2 345 47.2
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 6.2e-28 130.2 346 41.9
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 6.2e-28 130.2 384 37.8
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.1e-27 129.4 349 34.7
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 2.4e-27 128.3 375 42.7
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.4e-27 128.3 371 39.4
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 5.2e-27 127.1 371 40.2
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 5.2e-27 127.1 373 38.6
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 5.2e-27 127.1 336 41.4
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 5.2e-27 127.1 389 38.8
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 6.9e-27 126.7 429 36.4
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 9.0e-27 126.3 347 45.2
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 9.0e-27 126.3 336 43.8
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.2e-26 125.9 344 45.9
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 2.0e-26 125.2 417 35.7
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 2.6e-26 124.8 348 40.8
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.4e-26 124.4 388 37.1
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 3.4e-26 124.4 388 37.1
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 4.4e-26 124.0 330 40.3
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 5.8e-26 123.6 364 38.7
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 9.9e-26 122.9 348 33.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.3e-25 122.5 335 42.1
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.7e-25 122.1 457 33.5
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 2.9e-25 121.3 362 41.7
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.8e-25 120.9 336 41.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 4.9e-25 120.6 357 40.3
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 4.9e-25 120.6 357 40.3
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.1e-24 119.4 348 39.9
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.9e-24 118.6 329 41.0
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.4e-24 118.2 348 38.8
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 5.4e-24 117.1 357 42.6
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.4e-24 117.1 348 36.2
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 9.3e-24 116.3 194 35.1
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.5e-23 114.4 175 33.7
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 5.3e-19 100.5 114 41.2
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 4.9e-09 67.4 386 22.0
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 7.9e-07 60.1 102 33.3
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 6.7e-06 57.0 199 25.1


User provided reference genes

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