Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 2.9e-84 315.1 150 100.0
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 9.5e-59 230.3 133 79.7
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 6.2e-58 227.6 132 77.3
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 8.1e-58 227.3 142 76.8
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 1.1e-57 226.9 116 88.8
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 1.1e-57 226.9 132 78.8
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 1.8e-57 226.1 128 81.2
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 2.4e-57 225.7 139 75.5
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 3.1e-57 225.3 134 77.6
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 4.0e-57 224.9 134 77.6
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 4.0e-57 224.9 123 82.1
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 4.0e-57 224.9 132 77.3
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 5.2e-57 224.6 142 73.9
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 6.8e-57 224.2 117 85.5
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 8.9e-57 223.8 145 73.1
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 8.9e-57 223.8 142 73.2
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 8.9e-57 223.8 134 77.6
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 8.9e-57 223.8 139 74.8
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 1.2e-56 223.4 142 73.2
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 1.2e-56 223.4 145 74.5
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 1.2e-56 223.4 139 74.1
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 1.5e-56 223.0 145 73.8
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 1.5e-56 223.0 145 73.8
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.5e-56 223.0 125 80.0
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.0e-56 222.6 117 84.6
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 3.4e-56 221.9 134 76.9
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 3.4e-56 221.9 137 73.7
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 3.4e-56 221.9 125 80.0
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 4.4e-56 221.5 144 72.9
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 4.4e-56 221.5 124 79.8
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 5.8e-56 221.1 146 71.9
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 7.6e-56 220.7 130 79.2
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 7.6e-56 220.7 121 81.0
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 7.6e-56 220.7 124 79.8
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 7.6e-56 220.7 140 72.9
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 9.9e-56 220.3 144 70.8
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 9.9e-56 220.3 116 84.5
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 9.9e-56 220.3 124 80.6
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 9.9e-56 220.3 118 83.9
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 1.3e-55 219.9 117 82.9
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.3e-55 219.9 117 82.9
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 1.3e-55 219.9 129 79.1
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 1.7e-55 219.5 123 82.1
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 1.7e-55 219.5 123 82.1
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 1.7e-55 219.5 144 70.8
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 2.2e-55 219.2 117 82.1
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 2.2e-55 219.2 117 82.9
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 2.2e-55 219.2 142 72.5
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 2.9e-55 218.8 119 80.7
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 2.9e-55 218.8 127 78.0
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 2.9e-55 218.8 116 83.6
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 3.8e-55 218.4 121 80.2
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 3.8e-55 218.4 117 82.1
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 3.8e-55 218.4 126 77.0
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 4.9e-55 218.0 134 74.6
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 4.9e-55 218.0 145 69.7
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 8.4e-55 217.2 117 82.1
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 8.4e-55 217.2 136 73.5
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 1.1e-54 216.9 137 73.0
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 1.1e-54 216.9 129 77.5
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 1.1e-54 216.9 117 82.9
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 1.4e-54 216.5 147 70.1
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 1.9e-54 216.1 145 68.3
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 1.9e-54 216.1 130 76.2
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.9e-54 216.1 117 82.1
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 1.9e-54 216.1 117 82.1
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 2.4e-54 215.7 125 76.0
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 2.4e-54 215.7 117 81.2
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 3.2e-54 215.3 125 76.8
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 3.2e-54 215.3 120 80.8
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 3.2e-54 215.3 137 71.5
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 4.1e-54 214.9 117 79.5
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 4.1e-54 214.9 117 79.5
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 4.1e-54 214.9 137 71.5
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 5.4e-54 214.5 111 84.7
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 5.4e-54 214.5 111 84.7
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 9.2e-54 213.8 116 81.0
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 9.2e-54 213.8 140 70.0
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 9.2e-54 213.8 129 77.5
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 9.2e-54 213.8 126 75.4
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 1.2e-53 213.4 128 75.0
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 2.1e-53 212.6 117 80.3
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 2.1e-53 212.6 117 78.6
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 2.1e-53 212.6 142 69.0
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 2.7e-53 212.2 120 77.5
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 2.7e-53 212.2 123 80.5
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 3.5e-53 211.8 133 71.4
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 3.5e-53 211.8 133 75.2
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 4.6e-53 211.5 144 71.5
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 6.6e-52 207.6 136 70.6
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 8.6e-52 207.2 137 70.8
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 1.1e-51 206.8 113 81.4
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 1.5e-51 206.5 141 66.7
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 1.5e-51 206.5 144 66.7
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 2.5e-51 205.7 111 81.1
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 3.3e-51 205.3 126 73.0
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 4.3e-51 204.9 104 86.5
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 9.6e-51 203.8 114 78.9
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 2.1e-50 202.6 137 68.6
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.6e-50 201.8 114 78.1
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 3.6e-50 201.8 114 78.1
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 3.6e-50 201.8 135 70.4
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 6.2e-50 201.1 106 83.0
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 8.1e-50 200.7 127 73.2
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.8e-49 199.5 177 58.2
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 1.8e-49 199.5 177 58.2
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 3.1e-49 198.7 114 76.3
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 4.0e-49 198.4 117 75.2
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 5.2e-49 198.0 147 64.6
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 6.9e-49 197.6 134 69.4
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 3.4e-48 195.3 113 76.1
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 1.3e-47 193.4 142 64.8
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 2.2e-47 192.6 103 83.5
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.4e-46 189.1 102 77.5
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 7.1e-46 187.6 102 76.5
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 2.1e-42 176.0 129 67.4
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 3.6e-42 175.3 91 81.3
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 7.6e-40 167.5 109 71.6
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 2.9e-39 165.6 113 71.7
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 8.4e-39 164.1 92 79.3
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 1.1e-38 163.7 152 57.2
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 7.1e-38 161.0 119 63.9
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.8e-36 156.4 123 61.8
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 3.0e-36 155.6 78 85.9
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 5.6e-35 151.4 77 83.1
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.4e-33 146.0 112 59.8
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 6.9e-33 144.4 127 58.3
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 5.8e-32 141.4 89 71.9
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 2.1e-29 132.9 73 80.8
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 8.2e-26 120.9 102 55.9
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 2.0e-24 116.3 71 69.0
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 4.9e-23 111.7 67 76.1
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 1.6e-21 106.7 63 71.4
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 6.7e-20 101.3 62 69.4
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 3.7e-18 95.5 52 78.8
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 3.7e-18 95.5 43 86.0
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.1e-14 84.0 52 69.2
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 5.1e-12 75.1 43 79.1
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 3.3e-11 72.4 64 59.4
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 5.7e-11 71.6 40 72.5
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 2.4e-09 66.2 39 76.9
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.2e-08 63.9 49 61.2
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 1.5e-08 63.5 40 70.0


User provided reference genes

Program Settings