Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 0.0e+00 1204.1 620 100.0
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.4e-76 291.6 517 36.0
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 3.2e-76 290.4 550 34.0
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 7.9e-67 259.2 609 31.0
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.5e-57 228.4 589 32.1
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.1e-47 195.7 609 27.6
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 3.8e-45 187.2 610 28.2
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 3.8e-45 187.2 625 27.7
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 5.0e-45 186.8 619 26.2
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.9e-44 184.9 613 27.7
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 8.0e-43 179.5 551 27.2
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 8.0e-43 179.5 629 28.0
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.3e-42 177.9 561 26.6
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 5.2e-42 176.8 559 27.7
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 3.4e-41 174.1 607 26.4
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.4e-41 173.7 608 27.3
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 7.5e-41 172.9 623 26.6
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 2.2e-40 171.4 609 26.8
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 2.8e-40 171.0 608 27.0
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.7e-40 170.6 569 28.1
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.7e-40 170.6 547 27.1
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 3.7e-40 170.6 555 27.2
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 4.8e-40 170.2 551 27.4
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 4.8e-40 170.2 608 26.8
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 6.3e-40 169.9 608 27.0
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 8.3e-40 169.5 619 27.0
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 8.3e-40 169.5 624 24.8
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 1.4e-39 168.7 553 27.5
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 5.4e-39 166.8 562 26.5
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 9.1e-39 166.0 612 26.3
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 9.1e-39 166.0 608 24.5
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 9.1e-39 166.0 603 24.7
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.2e-38 165.6 550 27.3
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.2e-38 165.6 561 26.4
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.7e-38 164.5 557 27.5
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 2.7e-38 164.5 564 27.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 4.5e-38 163.7 610 24.9
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 4.5e-38 163.7 558 25.8
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 7.7e-38 162.9 551 24.5
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.0e-37 162.5 565 25.5
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.0e-37 162.5 556 26.1
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 1.3e-37 162.2 578 25.8
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.3e-37 162.2 617 25.9
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.7e-37 161.8 629 25.4
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.8e-37 160.6 629 25.3
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.1e-36 159.1 629 25.3
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 4.2e-36 157.1 565 25.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 5.5e-36 156.8 570 26.7
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 7.2e-36 156.4 558 25.4
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 7.2e-36 156.4 631 26.5
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 2.1e-35 154.8 623 25.2
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 4.7e-35 153.7 623 24.9
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.8e-34 151.8 582 24.6
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.3e-34 151.4 551 24.3
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 3.0e-34 151.0 593 25.3
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 4.0e-34 150.6 555 26.1
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 5.2e-34 150.2 586 25.8
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 6.8e-34 149.8 535 27.5
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 3.4e-33 147.5 618 24.1
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 4.4e-33 147.1 576 24.3
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 4.4e-33 147.1 624 25.8
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 4.4e-33 147.1 570 25.1
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 5.7e-33 146.7 493 26.6
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.3e-32 145.6 607 24.5
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 2.2e-32 144.8 617 24.0
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.8e-32 144.4 622 25.6
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 4.9e-32 143.7 582 24.4
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 1.1e-31 142.5 548 23.4
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.4e-31 142.1 578 24.4
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 2.4e-31 141.4 561 26.0
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 4.1e-31 140.6 572 24.1
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 4.1e-31 140.6 491 27.7
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 4.5e-30 137.1 555 25.4
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 2.3e-29 134.8 560 23.9
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.9e-29 134.4 576 23.8
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 5.0e-29 133.7 630 24.0
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 5.0e-29 133.7 631 24.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 3.3e-28 131.0 539 25.8
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 1.2e-27 129.0 637 22.4
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 2.1e-27 128.3 564 23.4
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 8.0e-27 126.3 515 26.4
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.0e-26 125.9 651 23.3
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 1.2e-25 122.5 520 23.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 3.4e-25 120.9 563 23.4
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 2.9e-24 117.9 366 26.2
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.1e-23 115.9 475 24.2
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.8e-23 115.2 601 23.0
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.4e-23 113.6 225 32.4
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.2e-22 112.5 350 26.9
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 3.5e-22 110.9 416 26.0
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 7.8e-22 109.8 225 32.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 3.3e-20 104.4 190 35.8
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 4.3e-20 104.0 772 22.0
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 4.3e-20 104.0 187 34.8
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 4.3e-20 104.0 385 26.0
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 7.3e-20 103.2 563 21.3
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 7.3e-20 103.2 617 24.3
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 9.5e-20 102.8 511 23.1
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.3e-16 89.7 349 25.8
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 7.8e-14 83.2 287 25.1
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-13 80.9 154 33.1
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.5e-12 79.0 217 27.2
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 3.3e-12 77.8 416 24.0
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.1e-10 72.8 86 44.2
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.1e-10 72.8 232 25.0
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 3.2e-07 61.2 98 35.7


User provided reference genes

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