Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.6e-252 875.5 434 100.0
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 3.9e-113 412.5 450 49.3
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 2.0e-109 400.2 440 51.1
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 1.4e-107 394.0 382 53.7
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 6.1e-106 388.7 379 51.7
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 7.9e-106 388.3 369 54.2
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.4e-105 387.5 366 54.1
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.8e-105 387.1 398 50.3
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 2.3e-105 386.7 356 53.4
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 5.1e-105 385.6 408 50.2
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 4.3e-104 382.5 300 60.7
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 2.8e-103 379.8 386 49.7
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 3.7e-103 379.4 367 52.0
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 1.8e-102 377.1 405 48.6
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 3.1e-102 376.3 369 49.9
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 5.3e-102 375.6 372 51.6
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 5.3e-102 375.6 367 49.3
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 4.5e-101 372.5 356 50.8
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 7.7e-101 371.7 438 47.0
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 1.3e-100 370.9 356 50.8
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.3e-100 370.9 416 45.9
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 1.3e-100 370.9 369 51.5
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 1.3e-100 370.9 368 51.6
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 2.9e-100 369.8 387 49.9
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 3.8e-100 369.4 366 50.0
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 5.0e-100 369.0 380 48.9
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.1e-99 367.9 384 49.5
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 1.4e-99 367.5 367 51.0
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.9e-99 367.1 431 45.9
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 2.5e-99 366.7 365 51.2
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 2.5e-99 366.7 384 49.5
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 9.4e-99 364.8 386 46.1
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 1.2e-98 364.4 377 50.1
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 2.1e-98 363.6 366 52.7
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.1e-98 363.6 356 50.3
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 2.7e-98 363.2 306 54.6
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 4.7e-98 362.5 369 48.5
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 6.1e-98 362.1 377 50.1
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 6.1e-98 362.1 367 51.0
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 7.9e-98 361.7 372 50.8
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 7.9e-98 361.7 357 51.0
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 7.9e-98 361.7 412 47.3
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 7.9e-98 361.7 432 46.8
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.0e-97 361.3 372 50.8
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.0e-97 361.3 367 49.9
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.8e-97 360.5 358 52.0
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.8e-97 360.5 377 49.9
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 3.0e-97 359.8 369 49.1
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 3.9e-97 359.4 356 50.6
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 3.9e-97 359.4 363 49.9
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 3.9e-97 359.4 356 50.0
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 5.1e-97 359.0 356 49.7
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 5.1e-97 359.0 371 49.9
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 5.1e-97 359.0 356 50.6
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 8.8e-97 358.2 364 49.5
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 8.8e-97 358.2 367 49.6
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.1e-96 357.8 401 47.4
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.5e-96 357.5 302 56.0
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 2.0e-96 357.1 302 56.0
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.0e-96 357.1 356 49.7
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 2.6e-96 356.7 399 47.4
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 2.6e-96 356.7 401 47.6
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 3.3e-96 356.3 358 51.7
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 3.3e-96 356.3 358 50.8
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 5.7e-96 355.5 369 50.9
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 5.7e-96 355.5 410 45.9
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 7.4e-96 355.1 357 50.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.4e-96 355.1 385 47.3
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 7.4e-96 355.1 395 47.8
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 7.4e-96 355.1 377 47.7
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 7.4e-96 355.1 367 49.3
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 7.4e-96 355.1 367 49.3
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 9.7e-96 354.8 385 47.3
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 9.7e-96 354.8 302 55.3
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 9.7e-96 354.8 382 47.6
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.3e-95 354.4 405 45.7
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.7e-95 354.0 361 50.1
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 1.7e-95 354.0 361 49.6
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.8e-95 352.4 423 46.1
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 4.8e-95 352.4 360 50.0
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 8.2e-95 351.7 394 45.9
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 8.2e-95 351.7 416 43.8
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 8.2e-95 351.7 369 49.3
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 1.1e-94 351.3 385 48.1
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.4e-94 350.9 388 47.7
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 2.4e-94 350.1 364 50.5
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 2.4e-94 350.1 302 56.0
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 3.1e-94 349.7 360 49.4
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.1e-94 349.7 368 50.0
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 5.3e-94 349.0 371 48.8
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.0e-94 348.6 410 45.6
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 7.0e-94 348.6 448 42.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 9.1e-94 348.2 302 55.0
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.2e-93 347.8 419 45.8
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.7e-92 344.0 347 52.4
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 6.1e-90 335.5 397 47.9
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 6.1e-90 335.5 357 48.7
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 5.2e-89 332.4 355 47.3
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 8.8e-89 331.6 341 48.7
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.6e-88 330.1 348 49.1
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.8e-86 323.9 323 49.8
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.2e-85 321.2 298 54.0
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 2.5e-83 313.5 335 47.5
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 9.4e-83 311.6 447 40.0
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 5.2e-81 305.8 317 48.9
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 9.8e-80 301.6 236 61.0
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 4.5e-77 292.7 317 44.2
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 3.8e-76 289.7 236 59.3
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.0e-69 267.3 284 46.5
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 1.2e-61 241.5 240 49.2
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 1.0e-60 238.4 239 49.0
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.8e-57 227.6 291 44.7
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 1.3e-52 211.5 208 51.0
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 2.8e-50 203.8 413 34.1
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 4.7e-50 203.0 175 54.9
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.1e-49 201.8 158 58.2
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.5e-48 198.0 335 37.6
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.7e-47 194.5 274 40.5
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 8.9e-41 172.2 147 49.7
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.9e-39 167.2 154 52.6
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.9e-38 164.5 244 38.9
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 9.2e-38 162.2 289 37.0
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.1e-35 155.2 142 53.5
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 1.1e-17 95.5 70 62.9
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.4e-14 84.3 54 72.2
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.0e-12 79.0 130 40.0
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 5.3e-09 66.6 111 35.1
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 2.6e-08 64.3 109 33.9
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 7.1e-06 56.2 36 66.7


User provided reference genes

Program Settings