Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 3.3e-121 438.7 283 100.0
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 4.8e-27 125.9 104 66.3
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.4e-26 124.4 102 67.6
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.8e-26 124.0 113 61.9
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 5.5e-23 112.5 136 48.5
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 3.0e-21 106.7 102 58.8
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 5.1e-21 105.9 114 54.4
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 1.1e-20 104.8 114 52.6
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 1.5e-20 104.4 105 56.2
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 1.9e-20 104.0 100 58.0
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 1.9e-20 104.0 102 57.8
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 3.3e-20 103.2 110 53.6
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 4.3e-20 102.8 105 57.1
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 4.3e-20 102.8 105 56.2
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 7.4e-20 102.1 107 54.2
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.6e-19 100.9 110 56.4
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 2.2e-19 100.5 97 56.7
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 4.8e-19 99.4 101 56.4
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 6.3e-19 99.0 70 70.0
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 6.3e-19 99.0 101 55.4
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 8.2e-19 98.6 100 54.0
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 8.2e-19 98.6 104 52.9
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 8.2e-19 98.6 115 49.6
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.1e-18 98.2 101 53.5
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.4e-18 97.8 99 54.5
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.8e-18 97.4 97 56.7
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.4e-18 97.1 110 50.0
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 2.4e-18 97.1 61 77.0
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.1e-18 96.7 110 50.9
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 3.1e-18 96.7 98 55.1
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 3.1e-18 96.7 102 52.9
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 4.1e-18 96.3 101 53.5
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 5.3e-18 95.9 98 54.1
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 5.3e-18 95.9 102 52.9
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 6.9e-18 95.5 101 53.5
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 9.0e-18 95.1 99 54.5
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 9.0e-18 95.1 101 52.5
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.5e-17 94.4 128 45.3
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.5e-17 94.4 103 53.4
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.5e-17 94.4 63 73.0
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 1.5e-17 94.4 97 53.6
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.5e-17 94.4 97 52.6
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.5e-17 94.4 68 67.6
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.5e-17 94.4 99 53.5
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 3.4e-17 93.2 97 53.6
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.4e-17 93.2 110 50.0
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 3.4e-17 93.2 97 55.7
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 4.5e-17 92.8 105 49.5
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 4.5e-17 92.8 97 53.6
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 4.5e-17 92.8 97 55.7
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 5.9e-17 92.4 62 72.6
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 7.7e-17 92.0 63 71.4
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 1.3e-16 91.3 63 69.8
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 3.8e-16 89.7 92 52.2
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 3.8e-16 89.7 147 42.2
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 3.8e-16 89.7 68 67.6
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 5.0e-16 89.4 60 75.0
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 5.0e-16 89.4 101 50.5
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 6.5e-16 89.0 64 68.8
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 8.5e-16 88.6 100 51.0
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 8.5e-16 88.6 68 64.7
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 8.5e-16 88.6 97 53.6
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 1.4e-15 87.8 63 66.7
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 1.4e-15 87.8 63 66.7
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 1.4e-15 87.8 63 66.7
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.4e-15 87.8 156 41.0
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 1.4e-15 87.8 64 68.8
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.4e-15 87.8 147 42.2
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 1.9e-15 87.4 63 66.7
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 1.9e-15 87.4 63 66.7
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 1.9e-15 87.4 60 70.0
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.9e-15 87.4 63 66.7
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.9e-15 87.4 63 66.7
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 1.9e-15 87.4 63 66.7
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 1.9e-15 87.4 60 70.0
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.9e-15 87.4 110 50.0
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.9e-15 87.4 97 52.6
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 3.2e-15 86.7 57 75.4
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 4.2e-15 86.3 60 68.3
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 4.2e-15 86.3 65 67.7
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 5.5e-15 85.9 63 66.7
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 5.5e-15 85.9 63 66.7
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 5.5e-15 85.9 64 67.2
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 7.2e-15 85.5 63 66.7
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 7.2e-15 85.5 56 75.0
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 1.6e-14 84.3 64 65.6
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 2.1e-14 84.0 96 46.9
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.0e-13 81.6 111 45.0
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 3.3e-12 76.6 85 50.6
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 3.3e-12 76.6 51 74.5
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 4.3e-12 76.3 52 71.2
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 2.8e-11 73.6 63 61.9
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.8e-10 70.9 96 43.8
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.2e-09 68.2 96 44.8
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.7e-08 64.3 73 50.7
AagrBONN_evm.TU.Sc2ySwM_362.439 Anthoceros agrestis HOM05D007606 ORTHO05D009600 3.8e-08 63.2 37 75.7


User provided reference genes

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