Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 1.5e-101 372.9 192 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 2.9e-44 182.6 191 49.2
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.1e-43 180.6 193 56.0
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 2.5e-43 179.5 188 52.1
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 5.5e-43 178.3 188 51.6
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 9.4e-43 177.6 189 52.9
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.2e-42 177.2 190 53.7
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.7e-42 176.0 192 53.1
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 3.6e-42 175.6 190 50.5
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 3.0e-41 172.6 189 51.3
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 3.0e-41 172.6 190 50.5
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 3.0e-41 172.6 189 52.4
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 3.0e-41 172.6 189 50.3
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 3.9e-41 172.2 190 51.1
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 6.7e-41 171.4 188 52.1
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 8.8e-41 171.0 189 49.2
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 8.8e-41 171.0 188 50.5
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.1e-40 170.6 189 49.7
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 2.0e-40 169.9 189 50.3
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 2.6e-40 169.5 189 54.0
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 3.3e-40 169.1 189 49.2
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 3.3e-40 169.1 189 49.2
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 4.4e-40 168.7 189 49.7
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.4e-40 168.7 189 49.7
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 5.7e-40 168.3 201 50.2
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 7.4e-40 167.9 189 49.7
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 9.7e-40 167.5 188 51.1
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.7e-39 166.8 187 51.3
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.7e-39 166.8 187 51.9
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 2.2e-39 166.4 188 51.1
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 2.8e-39 166.0 189 50.3
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 2.8e-39 166.0 189 50.3
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 8.2e-39 164.5 189 49.7
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.1e-38 164.1 188 51.6
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 1.1e-38 164.1 189 51.3
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 1.8e-38 163.3 189 50.3
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.8e-38 163.3 189 50.8
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 2.4e-38 162.9 189 50.8
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 3.1e-38 162.5 189 51.9
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 4.1e-38 162.2 188 50.0
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 5.3e-38 161.8 196 47.4
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 9.1e-38 161.0 192 47.9
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 9.1e-38 161.0 192 47.9
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 9.1e-38 161.0 188 49.5
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.2e-37 160.6 187 48.1
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 2.0e-37 159.8 188 49.5
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 2.6e-37 159.5 188 49.5
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 3.5e-37 159.1 189 52.4
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 3.5e-37 159.1 189 48.7
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 4.5e-37 158.7 188 49.5
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 7.7e-37 157.9 175 51.4
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.0e-36 157.5 189 49.2
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 1.0e-36 157.5 178 53.9
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 1.7e-36 156.8 188 47.9
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.7e-36 156.8 188 48.4
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 2.2e-36 156.4 190 50.5
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 2.2e-36 156.4 196 49.0
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 6.5e-36 154.8 190 47.4
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 6.5e-36 154.8 190 47.4
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 8.5e-36 154.5 189 48.1
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 8.5e-36 154.5 189 47.1
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 1.1e-35 154.1 191 47.6
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 1.9e-35 153.3 195 46.2
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.5e-35 152.9 192 47.4
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 3.2e-35 152.5 188 46.3
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 4.2e-35 152.1 189 46.0
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 4.2e-35 152.1 191 48.7
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 7.2e-35 151.4 191 46.6
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 7.2e-35 151.4 188 46.8
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 1.2e-34 150.6 191 47.1
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 1.2e-34 150.6 188 47.3
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.6e-34 150.2 189 45.5
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 1.6e-34 150.2 189 44.4
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 2.1e-34 149.8 189 48.1
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 3.6e-34 149.1 185 48.1
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 4.7e-34 148.7 187 48.1
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 4.7e-34 148.7 191 45.5
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 4.7e-34 148.7 182 48.4
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 4.0e-33 145.6 190 46.8
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 5.2e-33 145.2 189 44.4
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.5e-32 143.7 188 43.6
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 2.6e-32 142.9 188 47.3
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 2.6e-32 142.9 200 44.0
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 9.7e-32 141.0 189 44.4
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 2.8e-31 139.4 190 42.6
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 3.7e-31 139.0 195 42.6
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 3.7e-31 139.0 190 44.2
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 4.8e-31 138.7 190 46.3
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 3.1e-30 136.0 201 48.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 5.3e-30 135.2 191 42.9
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 5.3e-30 135.2 189 43.4
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 5.3e-30 135.2 189 46.6
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 9.1e-30 134.4 189 45.0
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 3.5e-29 132.5 188 41.0
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 1.3e-28 130.6 175 44.0
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.2e-28 129.8 188 43.6
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.9e-27 126.7 189 41.3
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 9.4e-27 124.4 188 41.5
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.1e-26 123.2 188 39.9
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 2.7e-26 122.9 174 43.7
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 2.7e-26 122.9 164 46.3
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 3.6e-26 122.5 202 39.1
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 6.1e-26 121.7 188 42.0
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.0e-25 120.9 189 41.3
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.5e-24 117.1 192 40.1
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 7.5e-24 114.8 188 37.2
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 7.5e-24 114.8 152 44.7
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 2.4e-22 109.8 216 35.6
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 4.1e-22 109.0 188 38.3
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 4.1e-22 109.0 188 38.3
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 2.7e-21 106.3 150 43.3
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 4.5e-21 105.5 198 35.9
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 1.0e-20 104.4 188 35.6
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.0e-20 104.4 150 43.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 3.3e-19 99.4 155 43.9
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 5.5e-19 98.6 83 60.2
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 1.4e-17 94.0 73 63.0
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.8e-17 93.6 73 61.6
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 2.3e-17 93.2 97 51.5
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 4.0e-17 92.4 73 60.3
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 8.9e-17 91.3 175 34.3
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.0e-16 90.1 136 40.4
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 2.6e-16 89.7 77 58.4
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 1.7e-15 87.0 116 43.1
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 4.9e-15 85.5 59 69.5
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 4.9e-15 85.5 153 37.3
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 3.1e-14 82.8 146 37.0
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 1.0e-12 77.8 84 47.6
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 1.3e-12 77.4 154 35.7
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 2.9e-12 76.3 108 43.5
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 5.6e-11 72.0 163 32.5
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 1.2e-10 70.9 79 49.4
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.6e-10 70.5 74 51.4
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 4.7e-10 68.9 188 31.4
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.3e-09 66.6 83 45.8
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 4.9e-07 58.9 118 37.3


User provided reference genes

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