Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0023s0082 Marchantia polymorpha HOM05D007098 ORTHO05D008793 0.0e+00 1182.9 948 100.0
Pp3c3_19290 Physcomitrium patens HOM05D007098 ORTHO05D008793 9.3e-43 179.9 183 43.7
SEGI_05165 Sequoiadendron giganteum HOM05D007098 ORTHO05D008793 1.8e-33 149.1 201 35.3
Cc04_g10690 Coffea canephora HOM05D007098 ORTHO05D008793 1.1e-32 146.4 218 36.2
Atru.chr9.986 Acer truncatum HOM05D007098 ORTHO05D008793 9.7e-32 143.3 215 34.4
CDE09G0597 Ceratophyllum demersum HOM05D007098 ORTHO05D008793 1.3e-31 142.9 222 33.8
ATR0824G168 Amborella trichopoda HOM05D007098 ORTHO05D008793 2.8e-31 141.7 195 36.4
Manes.06G113500 Manihot esculenta HOM05D007098 ORTHO05D008793 3.1e-30 138.3 304 30.3
Lsat_1_v5_gn_4_78280 Lactuca sativa HOM05D007098 ORTHO05D008793 4.1e-30 137.9 240 32.1
Dinv11119 Davidia involucrata HOM05D002040 ORTHO05D002502 6.9e-30 137.1 196 36.7
Glyma.02G116500 Glycine max HOM05D007098 ORTHO05D008793 1.5e-29 136.0 238 31.9
Peaxi162Scf00089g00927 Petunia axillaris HOM05D007098 ORTHO05D008793 1.5e-29 136.0 241 32.0
Nitab4.5_0001360g0150 Nicotiana tabacum HOM05D007098 ORTHO05D008793 3.4e-29 134.8 196 36.2
TAR371G0113 Trochodendron aralioides HOM05D007098 ORTHO05D008793 4.5e-29 134.4 201 34.8
VMungo1127G2011 Vigna mungo HOM05D007098 ORTHO05D008793 4.5e-29 134.4 268 32.5
GSVIVG01007576001 Vitis vinifera HOM05D007098 ORTHO05D008793 4.5e-29 134.4 220 30.9
Lj5A101T108 Lonicera japonica HOM05D007098 ORTHO05D008793 5.9e-29 134.0 203 34.5
MBI11_g46348_MAGBIO Magnolia biondii HOM05D007098 ORTHO05D008793 1.0e-28 133.3 246 30.9
ClCG03G003340 Citrullus lanatus HOM05D007098 ORTHO05D008793 1.3e-28 132.9 201 34.8
Nitab4.5_0006717g0020 Nicotiana tabacum HOM05D007098 ORTHO05D008793 1.3e-28 132.9 231 33.3
PGSC0003DMG400015232 Solanum tuberosum HOM05D007098 ORTHO05D008793 1.3e-28 132.9 234 32.5
AagrBONN_evm.TU.Sc2ySwM_228.5130 Anthoceros agrestis HOM05D007098 ORTHO05D008793 1.7e-28 132.5 187 35.3
CsaV3_1G009150 Cucumis sativus L. HOM05D007098 ORTHO05D008793 1.7e-28 132.5 203 34.5
Thecc.03G120500 Theobroma cacao HOM05D007098 ORTHO05D008793 1.7e-28 132.5 259 32.4
Cpa.g.sc4.42 Carica papaya HOM05D007098 ORTHO05D008793 2.2e-28 132.1 261 31.8
Gorai.001G062100 Gossypium raimondii HOM05D007098 ORTHO05D008793 2.2e-28 132.1 268 31.7
Sabra12G0066500 Salix brachista HOM05D007098 ORTHO05D008793 2.2e-28 132.1 230 34.3
VMungo1215G0824 Vigna mungo HOM05D007098 ORTHO05D008793 2.2e-28 132.1 206 35.0
Duzib205G2031 Durio zibethinus HOM05D007098 ORTHO05D008793 2.9e-28 131.7 200 36.0
Lj2g0008135 Lotus japonicus HOM05D007098 ORTHO05D008793 2.9e-28 131.7 234 32.5
Sopen03g030770 Solanum pennellii HOM05D007098 ORTHO05D008793 2.9e-28 131.7 299 30.4
CSS0030055 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 3.8e-28 131.3 198 33.8
Gohir.D07G058600 Gossypium hirsutum HOM05D007098 ORTHO05D008793 5.0e-28 131.0 261 33.3
TWI39G0887 Tripterygium wilfordii HOM05D007098 ORTHO05D008793 5.0e-28 131.0 253 28.9
Gohir.A07G054300 Gossypium hirsutum HOM05D007098 ORTHO05D008793 6.5e-28 130.6 257 33.5
HanXRQChr09g0272771 Helianthus annuus HOM05D007098 ORTHO05D008793 8.5e-28 130.2 365 27.9
Phvul.011G039200 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 8.5e-28 130.2 235 33.6
Ciclev10019054m.g Citrus clementina HOM05D007098 ORTHO05D008793 1.4e-27 129.4 264 28.8
Nn5g28372 Nelumbo nucifera HOM05D007098 ORTHO05D008793 1.4e-27 129.4 196 32.7
CiPaw.11G013600 Carya illinoinensis HOM05D007098 ORTHO05D008793 2.5e-27 128.6 201 33.8
Glyma.12G037500 Glycine max HOM05D007098 ORTHO05D008793 2.5e-27 128.6 202 35.1
MD06G1160200 Malus domestica HOM05D007098 ORTHO05D008793 2.5e-27 128.6 201 35.3
Hma1.2p1_0014F.1_g009950 Hydrangea macrophylla HOM05D007098 ORTHO05D008793 3.2e-27 128.3 198 34.3
Phvul.003G042600 Phaseolus vulgaris HOM05D007098 ORTHO05D008793 3.2e-27 128.3 202 34.7
Solyc03g111650.4 Solanum lycopersicum HOM05D007098 ORTHO05D008793 3.2e-27 128.3 299 30.4
ECA232G2468 Erigeron canadensis HOM05D001195 ORTHO05D001138 4.2e-27 127.9 260 30.8
FAN04G0983 Fragaria x ananassa HOM05D007098 ORTHO05D008793 4.2e-27 127.9 212 33.5
FAN18G2243 Fragaria x ananassa HOM05D007098 ORTHO05D008793 4.2e-27 127.9 212 33.0
arahy.Tifrunner.gnm1.ann1.RHK9HC Arachis hypogaea HOM05D007098 ORTHO05D008793 9.4e-27 126.7 304 28.6
BcaB01g02904 Brassica carinata HOM05D007098 ORTHO05D008793 9.4e-27 126.7 199 35.2
AUR62025750 Chenopodium quinoa HOM05D007098 ORTHO05D008793 9.4e-27 126.7 237 31.6
Psat2g130240 Pisum sativum HOM05D007098 ORTHO05D008793 9.4e-27 126.7 196 35.7
Cfa018906 Carpinus fangiana HOM05D007098 ORTHO05D008793 1.2e-26 126.3 202 33.2
CANSAT80G2237 Cannabis sativa HOM05D007098 ORTHO05D008793 1.6e-26 125.9 207 32.4
Glyma.11G111200 Glycine max HOM05D007098 ORTHO05D008793 2.1e-26 125.6 260 30.8
BolC3t15668H Brassica oleracea HOM05D007098 ORTHO05D008793 2.7e-26 125.2 199 35.2
EL10Ac7g18049 Beta vulgaris HOM05D007098 ORTHO05D008793 3.6e-26 124.8 207 33.3
A03p27750 Brassica napus HOM05D007098 ORTHO05D008793 3.6e-26 124.8 199 34.7
Rhsim08G0182900 Rhododendron simsii HOM05D007098 ORTHO05D008793 3.6e-26 124.8 202 31.7
RcHm_v2.0_Chr7g0191671 Rosa chinensis HOM05D007098 ORTHO05D008793 3.6e-26 124.8 264 31.1
arahy.Tifrunner.gnm1.ann1.PW5CDL Arachis hypogaea HOM05D007098 ORTHO05D008793 4.7e-26 124.4 304 28.3
Thhalv10012796m.g Eutrema salsugineum HOM05D007098 ORTHO05D008793 4.7e-26 124.4 196 34.2
THA.LOC104824999 Tarenaya hassleriana HOM05D007098 ORTHO05D008793 4.7e-26 124.4 236 30.1
Carub.0008s1032 Capsella rubella HOM05D007098 ORTHO05D008793 7.9e-26 123.6 222 31.5
FAN13G2898 Fragaria x ananassa HOM05D007098 ORTHO05D008793 7.9e-26 123.6 211 32.7
vmacro19257 Vaccinium macrocarpon HOM05D007098 ORTHO05D008793 7.9e-26 123.6 251 28.7
C03p33470 Brassica napus HOM05D007098 ORTHO05D008793 1.0e-25 123.2 199 34.7
FvH4_5g07010 Fragaria vesca HOM05D007098 ORTHO05D008793 1.0e-25 123.2 212 33.0
PSO063G4104 Papaver somniferum HOM05D007098 ORTHO05D008793 1.0e-25 123.2 210 30.5
Potri.012G091800 Populus trichocarpa HOM05D007098 ORTHO05D008793 1.0e-25 123.2 308 28.6
Hund21512 Selenicereus undatus HOM05D007098 ORTHO05D008793 1.0e-25 123.2 266 29.3
Haze_07291 Corylus avellana HOM05D007098 ORTHO05D008793 1.4e-25 122.9 252 29.8
Prupe.5G160200 Prunus persica HOM05D007098 ORTHO05D008793 1.4e-25 122.9 261 30.3
QL10p005624 Quercus lobata HOM05D007098 ORTHO05D008793 1.4e-25 122.9 200 33.5
BraA03t11986Z Brassica rapa HOM05D007098 ORTHO05D008793 1.8e-25 122.5 240 31.7
Actinidia16202 Actinidia chinensis HOM05D007098 ORTHO05D008793 3.0e-25 121.7 290 29.0
BcaC01g04822 Brassica carinata HOM05D007098 ORTHO05D008793 3.9e-25 121.3 199 34.2
Aa31LG3G5960 Aethionema arabicum HOM05D007098 ORTHO05D008793 5.2e-25 120.9 198 30.8
AUR62001258 Chenopodium quinoa HOM05D007098 ORTHO05D008793 5.2e-25 120.9 237 32.1
PSO782G3618 Papaver somniferum HOM05D007098 ORTHO05D008793 5.2e-25 120.9 210 30.5
MSTRG.9703 Avicennia marina HOM05D007098 ORTHO05D008793 6.7e-25 120.6 241 31.1
SalBow1G0423 Salvia bowleyana HOM05D007098 ORTHO05D008793 6.7e-25 120.6 305 28.5
Dinv38489 Davidia involucrata HOM05D007098 ORTHO05D008793 8.8e-25 120.2 200 32.5
Medtr5g045490 Medicago truncatula HOM05D007098 ORTHO05D008793 8.8e-25 120.2 299 29.1
Sed0010608 Sechium edule HOM05D007098 ORTHO05D008793 1.1e-24 119.8 201 32.8
CARHR258300 Cardamine hirsuta HOM05D007098 ORTHO05D008793 2.0e-24 119.0 196 32.1
Migut.D02039 Erythranthe guttata HOM05D007098 ORTHO05D008793 2.0e-24 119.0 206 33.5
AT5G50280 Arabidopsis thaliana HOM05D007098 ORTHO05D008793 2.6e-24 118.6 196 33.2
arahy.Tifrunner.gnm1.ann1.L7HRZC Arachis hypogaea HOM05D007098 ORTHO05D008793 2.6e-24 118.6 304 27.3
Sp6g12370 Schrenkiella parvula HOM05D007098 ORTHO05D008793 4.4e-24 117.9 196 31.6
Ah.08g218330 Amaranthus hybridus HOM05D007098 ORTHO05D008793 5.7e-24 117.5 200 32.5
Lalb_Chr10g0098821 Lupinus albus HOM05D007098 ORTHO05D008793 7.4e-24 117.1 240 31.2
MELO3C002322.2 Cucumis melo HOM05D007098 ORTHO05D008793 1.3e-23 116.3 202 32.7
CSS0038177 Camellia sinensis var. sinensis HOM05D007098 ORTHO05D008793 2.8e-23 115.2 198 31.8
HPP92_024236 Vanilla planifolia HOM05D007098 ORTHO05D008793 3.7e-23 114.8 161 36.6
Sc22g0003940 Simmondsia chinensis HOM05D007098 ORTHO05D008793 4.8e-23 114.4 175 34.9
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 5.3e-22 110.9 307 27.7
TPR.G24468 Trifolium pratense HOM05D007098 ORTHO05D008793 2.0e-21 109.0 196 32.1
Ca_04973_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 1.1e-19 103.2 256 29.7
Eucgr.B00165 Eucalyptus grandis HOM05D007098 ORTHO05D008793 3.6e-18 98.2 149 34.2
CAN.G472.49 Capsicum annuum HOM05D007098 ORTHO05D008793 6.7e-17 94.0 141 36.2
Glyma.01G059100 Glycine max HOM05D007098 ORTHO05D008793 5.9e-13 80.9 153 30.7
Cpa.g.sc4.27 Carica papaya HOM05D006000 ORTHO05D008793 1.3e-12 79.7 129 34.1
Atru.ctg752_3.82 Acer truncatum HOM05D002453 ORTHO05D008746 3.6e-10 71.6 181 25.4
RcHm_v2.0_Chr7g0184831 Rosa chinensis HOM05D002453 ORTHO05D008746 5.2e-09 67.8 180 26.1
PGR042G2216 Punica granatum HOM05D007322 ORTHO05D009029 1.2e-08 66.6 139 29.5
Cfa019553 Carpinus fangiana HOM05D002453 ORTHO05D008746 2.6e-08 65.5 180 24.4
TWI38G0410 Tripterygium wilfordii HOM05D002453 ORTHO05D008746 2.6e-08 65.5 197 25.4
FvH4_5g12530 Fragaria vesca HOM05D002453 ORTHO05D008746 9.8e-08 63.5 182 28.6
Pp3c4_14490 Physcomitrium patens HOM05D005862 ORTHO05D000003 9.8e-08 63.5 167 24.0
CsaV3_4G032750 Cucumis sativus L. HOM05D002453 ORTHO05D008746 1.3e-07 63.2 200 25.5
Haze_09312 Corylus avellana HOM05D002453 ORTHO05D008746 2.2e-07 62.4 180 23.9
FAN18G1084 Fragaria x ananassa HOM05D002453 ORTHO05D008746 2.2e-07 62.4 182 28.6
MELO3C007342.2 Cucumis melo HOM05D000891 ORTHO05D000761 4.8e-07 61.2 210 25.2
Ca_30971_v3 Cicer arietinum L. HOM05D007098 ORTHO05D008793 6.3e-07 60.8 152 29.6
MELO3C007346.2 Cucumis melo HOM05D000891 ORTHO05D000761 3.1e-06 58.5 106 27.4
Oeu059257.1 Olea europaea HOM05D002453 ORTHO05D008746 9.1e-06 57.0 162 21.6
Hund12986 Selenicereus undatus HOM05D007322 ORTHO05D009029 9.1e-06 57.0 167 23.4


User provided reference genes

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