Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0017s0002 Marchantia polymorpha HOM05D002224 ORTHO05D256857 2.5e-28 128.6 94 100.0
Mapoly0151s0018 Marchantia polymorpha HOM05D002224 ORTHO05D002446 2.3e-10 68.9 52 75.0
Pp3c12_900 Physcomitrium patens HOM05D002224 ORTHO05D002446 3.9e-10 68.2 53 73.6
Pp3c12_910 Physcomitrium patens HOM05D002224 ORTHO05D002446 3.9e-10 68.2 53 73.6
Pp3c17_680 Physcomitrium patens HOM05D002224 ORTHO05D002446 3.9e-10 68.2 53 73.6
Pp3c17_710 Physcomitrium patens HOM05D002224 ORTHO05D002446 3.9e-10 68.2 53 73.6
AagrBONN_evm.TU.Sc2ySwM_117.1220 Anthoceros agrestis HOM05D002224 ORTHO05D002446 7.4e-09 63.9 53 67.9
MBI11_g40184_MAGBIO Magnolia biondii HOM05D002224 ORTHO05D002446 7.4e-09 63.9 58 62.1
GSVIVG01018133001 Vitis vinifera HOM05D002224 ORTHO05D002446 7.4e-09 63.9 58 60.3
Sc25g0004120 Simmondsia chinensis HOM05D002224 ORTHO05D002446 1.3e-08 63.2 57 59.6
Ca_11949_v3 Cicer arietinum L. HOM05D002224 ORTHO05D002446 2.2e-08 62.4 58 58.6
FvH4_4g02970 Fragaria vesca HOM05D002224 ORTHO05D002446 2.2e-08 62.4 57 59.6
TAR633G1794 Trochodendron aralioides HOM05D002224 ORTHO05D002446 2.2e-08 62.4 55 61.8
Aqoxy2G03594 Aquilegia oxysepala HOM05D002224 ORTHO05D002446 4.8e-08 61.2 58 58.6
vmacro15416 Vaccinium macrocarpon HOM05D002224 ORTHO05D002446 4.8e-08 61.2 58 56.9
PGR004G2419 Punica granatum HOM05D002224 ORTHO05D002446 6.3e-08 60.8 57 59.6
RcHm_v2.0_Chr4g0391041 Rosa chinensis HOM05D002224 ORTHO05D002446 6.3e-08 60.8 56 58.9
Lj5g0007272 Lotus japonicus HOM05D002224 ORTHO05D002446 8.2e-08 60.5 58 56.9
Lj6g0016969 Lotus japonicus HOM05D002224 ORTHO05D002446 8.2e-08 60.5 58 56.9
Psat6g107120 Pisum sativum HOM05D002224 ORTHO05D002446 8.2e-08 60.5 57 57.9
TPR.G26447 Trifolium pratense HOM05D002224 ORTHO05D002446 8.2e-08 60.5 58 56.9
MD13G1209100 Malus domestica HOM05D002224 ORTHO05D002446 1.4e-07 59.7 55 60.0
Prupe.1G033200 Prunus persica HOM05D002224 ORTHO05D002446 1.4e-07 59.7 55 60.0
Lalb_Chr19g0128431 Lupinus albus HOM05D002224 ORTHO05D002446 1.8e-07 59.3 57 57.9
Lalb_Chr21g0312421 Lupinus albus HOM05D002224 ORTHO05D002446 1.8e-07 59.3 57 54.4
Medtr1g044450 Medicago truncatula HOM05D002224 ORTHO05D002446 2.4e-07 58.9 57 56.1
Rhsim02G0034400 Rhododendron simsii HOM05D002224 ORTHO05D002446 2.4e-07 58.9 58 60.3
Sc13g0005120 Simmondsia chinensis HOM05D002224 ORTHO05D002446 2.4e-07 58.9 57 56.1
TPR.G28750 Trifolium pratense HOM05D002224 ORTHO05D002446 2.4e-07 58.9 57 56.1
HPP92_015885 Vanilla planifolia HOM05D002224 ORTHO05D002446 2.4e-07 58.9 57 59.6
Lalb_Chr03g0037041 Lupinus albus HOM05D002224 ORTHO05D002446 3.1e-07 58.5 57 56.1
Medtr1g073790 Medicago truncatula HOM05D002224 ORTHO05D002446 3.1e-07 58.5 58 55.2
TWI73G0813 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 3.1e-07 58.5 58 55.2
Duzib052G0858 Durio zibethinus HOM05D002224 ORTHO05D002446 4.1e-07 58.2 58 60.3
Lj3A795G23 Lonicera japonica HOM05D002224 ORTHO05D002446 4.1e-07 58.2 58 53.4
Oeu021414.1 Olea europaea HOM05D002224 ORTHO05D002446 4.1e-07 58.2 57 57.9
PSO210G1885 Papaver somniferum HOM05D002224 ORTHO05D002446 4.1e-07 58.2 57 54.4
PSO832G3587 Papaver somniferum HOM05D002224 ORTHO05D002446 5.3e-07 57.8 57 54.4
Cpa.g.sc44.110 Carica papaya HOM05D002224 ORTHO05D002446 6.9e-07 57.4 56 55.4
Oeu002596.1 Olea europaea HOM05D002224 ORTHO05D002446 6.9e-07 57.4 57 54.4
SMO143G0062 Selaginella moellendorffii HOM05D002224 ORTHO05D002446 6.9e-07 57.4 45 68.9
SEGI_07200 Sequoiadendron giganteum HOM05D002224 ORTHO05D002446 6.9e-07 57.4 54 57.4
TAR636G2710 Trochodendron aralioides HOM05D002224 ORTHO05D002446 6.9e-07 57.4 53 58.5
Ca_11941_v3 Cicer arietinum L. HOM05D002224 ORTHO05D002446 9.1e-07 57.0 57 52.6
FAN17G0240 Fragaria x ananassa HOM05D002224 ORTHO05D002446 9.1e-07 57.0 52 61.5
FAN22G0018 Fragaria x ananassa HOM05D002224 ORTHO05D002446 9.1e-07 57.0 52 61.5
Psat6g132600 Pisum sativum HOM05D002224 ORTHO05D002446 9.1e-07 57.0 56 55.4
Manes.15G037500 Manihot esculenta HOM05D002224 ORTHO05D002446 1.2e-06 56.6 56 57.1
Hund11858 Selenicereus undatus HOM05D002224 ORTHO05D002446 1.2e-06 56.6 48 62.5
TWI09G1092 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 1.2e-06 56.6 58 53.4
Potri.008G163300 Populus trichocarpa HOM05D002224 ORTHO05D002446 1.5e-06 56.2 56 55.4
Potri.010G075000 Populus trichocarpa HOM05D002224 ORTHO05D002446 1.5e-06 56.2 56 55.4
QL06p015938 Quercus lobata HOM05D002224 ORTHO05D002446 1.5e-06 56.2 54 57.4
Sabra08G0124600 Salix brachista HOM05D002224 ORTHO05D002446 1.5e-06 56.2 56 55.4
Sabra10G0033800 Salix brachista HOM05D002224 ORTHO05D002446 1.5e-06 56.2 56 55.4
EL10Ac3g05897 Beta vulgaris HOM05D002224 ORTHO05D002446 2.0e-06 55.8 58 56.9
Phvul.007G129700 Phaseolus vulgaris HOM05D002224 ORTHO05D002446 2.0e-06 55.8 48 60.4
Sed0005071 Sechium edule HOM05D002224 ORTHO05D002446 2.0e-06 55.8 57 57.9
VMungo0720G0464 Vigna mungo HOM05D002224 ORTHO05D002446 2.0e-06 55.8 48 60.4
TWI53G1239 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 2.6e-06 55.5 56 53.6
TWI53G1395 Tripterygium wilfordii HOM05D002224 ORTHO05D002446 2.6e-06 55.5 56 53.6
TAR365G0712 Trochodendron aralioides HOM05D002224 ORTHO05D002446 2.6e-06 55.5 52 57.7
arahy.Tifrunner.gnm1.ann1.1XI841 Arachis hypogaea HOM05D002224 ORTHO05D002446 3.4e-06 55.1 53 56.6
arahy.Tifrunner.gnm1.ann1.E2XQ4Y Arachis hypogaea HOM05D002224 ORTHO05D002446 3.4e-06 55.1 53 56.6
DCAR_002341 Daucus carota HOM05D002224 ORTHO05D002446 3.4e-06 55.1 54 55.6
Hund04557 Selenicereus undatus HOM05D002224 ORTHO05D002446 3.4e-06 55.1 48 60.4
TAR362G0167 Trochodendron aralioides HOM05D002224 ORTHO05D002446 3.4e-06 55.1 48 60.4
CiPaw.02G115800 Carya illinoinensis HOM05D002224 ORTHO05D002446 4.5e-06 54.7 53 56.6
CsaV3_3G012500 Cucumis sativus L. HOM05D002224 ORTHO05D002446 4.5e-06 54.7 57 56.1
MD16G1211000 Malus domestica HOM05D002224 ORTHO05D002446 4.5e-06 54.7 52 57.7
Atru.chr4.2182 Acer truncatum HOM05D002224 ORTHO05D002446 5.9e-06 54.3 48 60.4
MSTRG.24697 Avicennia marina HOM05D002224 ORTHO05D002446 5.9e-06 54.3 58 53.4
DCAR_027286 Daucus carota HOM05D002224 ORTHO05D002446 5.9e-06 54.3 56 53.6
Glyma.10G188600 Glycine max HOM05D002224 ORTHO05D002446 5.9e-06 54.3 55 56.4
Nn1g02667 Nelumbo nucifera HOM05D002224 ORTHO05D002446 5.9e-06 54.3 52 59.6
Carub.0001s0349 Capsella rubella HOM05D002224 ORTHO05D002446 7.7e-06 53.9 54 53.7
Ciclev10004192m.g Citrus clementina HOM05D002224 ORTHO05D002446 7.7e-06 53.9 48 60.4
DCAR_030728 Daucus carota HOM05D002224 ORTHO05D002446 7.7e-06 53.9 58 50.0


User provided reference genes

Program Settings