Gene: Pp3c12_900
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c12_900
- Transcript Identifier Pp3c12_900V3.4
- Gene Type Coding gene
- Location Chr12 : 899527-908083 : positive
Gene Family Information
- ID HOM05D002224
- #Genes/#Species 302/99
- Phylogenetic origin
- ID ORTHO05D002446
- #Genes/#Species 287/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- name Pp3c12_900V3.4
- pacid 32972816
- alias Phypa_3473
- alias Phpat.012G002200
- alias Pp1s349_6V6
- uniprot A0A2K1JP13
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045087 | ISO | PLAZA Integrative Orthology | innate immune response | AT5G43560 |
| GO:1905037 | ISO | PLAZA Integrative Orthology | autophagosome organization | AT5G43560 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0043424 | ISO | PLAZA Integrative Orthology | protein histidine kinase binding | AT5G43560 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G43560 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G04300 |
| GO:0005776 | ISO | PLAZA Integrative Orthology | autophagosome | AT5G43560 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G04300 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.3.2.3 | Protein homeostasis.autophagy.nucleation complexes.auxiliary ATG6-stability component TRAF1 |