Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 5.1e-120 434.5 230 100.0
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 4.2e-66 255.4 221 58.4
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 5.5e-66 255.0 221 57.0
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.0e-64 249.2 221 57.5
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.0e-64 249.2 221 57.5
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 5.2e-64 248.4 221 54.8
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 5.2e-64 248.4 221 58.4
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 2.0e-63 246.5 221 57.9
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 2.8e-62 242.7 221 54.3
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 3.7e-62 242.3 215 56.7
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 4.9e-62 241.9 222 54.1
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.1e-61 240.7 221 56.6
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.4e-61 240.4 221 53.8
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 1.8e-61 240.0 206 57.3
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 3.1e-61 239.2 221 56.6
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 4.1e-61 238.8 221 54.3
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.1e-61 238.8 221 56.1
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 4.1e-61 238.8 221 55.2
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 5.4e-61 238.4 221 54.3
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 5.4e-61 238.4 211 56.9
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 9.2e-61 237.7 221 53.8
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.6e-60 236.9 221 55.7
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 2.0e-60 236.5 219 56.6
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 2.7e-60 236.1 221 53.4
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.7e-60 236.1 221 53.8
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 2.7e-60 236.1 221 55.2
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 4.5e-60 235.3 221 54.3
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 4.5e-60 235.3 221 53.4
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 5.9e-60 235.0 221 52.0
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 5.9e-60 235.0 215 55.8
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 7.8e-60 234.6 221 53.8
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 7.8e-60 234.6 224 52.7
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 7.8e-60 234.6 221 53.4
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 1.0e-59 234.2 221 52.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 1.7e-59 233.4 221 54.8
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 1.7e-59 233.4 215 54.0
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.7e-59 233.4 221 53.4
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 5.0e-59 231.9 221 54.8
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 6.6e-59 231.5 215 54.0
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 6.6e-59 231.5 221 54.3
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 8.6e-59 231.1 228 52.6
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.1e-58 230.7 221 53.4
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.1e-58 230.7 221 52.0
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.5e-58 230.3 221 52.5
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 2.5e-58 229.6 221 54.3
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 2.5e-58 229.6 221 54.3
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.5e-58 229.6 246 50.0
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 3.3e-58 229.2 221 53.8
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.3e-58 229.2 205 57.1
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 4.3e-58 228.8 221 53.8
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 5.6e-58 228.4 215 53.0
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 5.6e-58 228.4 221 55.2
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 5.6e-58 228.4 215 54.0
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 1.2e-57 227.3 221 53.8
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 1.2e-57 227.3 221 52.9
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 1.6e-57 226.9 221 54.3
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 2.8e-57 226.1 221 52.9
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 2.8e-57 226.1 254 47.2
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 8.0e-57 224.6 221 53.4
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.4e-56 223.8 215 52.1
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 4.0e-56 222.2 223 51.6
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 5.2e-56 221.9 205 54.1
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 1.2e-55 220.7 204 55.9
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.2e-55 220.7 216 54.2
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.2e-55 220.7 221 52.0
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 1.5e-55 220.3 224 52.2
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 3.4e-55 219.2 254 46.9
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 9.8e-55 217.6 215 52.1
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 2.9e-54 216.1 221 50.7
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 8.3e-54 214.5 221 50.2
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 8.3e-54 214.5 206 54.4
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 2.4e-53 213.0 215 51.2
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 5.4e-53 211.8 226 48.7
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.4e-53 211.8 205 53.7
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 7.0e-53 211.5 213 52.1
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 9.2e-53 211.1 221 49.8
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 9.2e-53 211.1 221 50.2
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 9.2e-53 211.1 221 50.2
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 9.2e-53 211.1 221 50.2
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 1.2e-52 210.7 215 50.7
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 1.2e-52 210.7 221 48.9
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 1.2e-52 210.7 221 48.9
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.2e-52 210.7 205 53.2
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 2.0e-52 209.9 221 48.9
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 2.0e-52 209.9 194 56.2
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 4.6e-52 208.8 208 51.9
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 6.0e-52 208.4 221 48.4
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 6.0e-52 208.4 221 48.4
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 6.0e-52 208.4 221 48.4
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.3e-51 207.2 195 52.8
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 6.6e-51 204.9 220 52.3
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 6.6e-51 204.9 215 49.3
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 1.9e-50 203.4 221 47.1
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 5.6e-50 201.8 195 51.8
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 9.5e-50 201.1 199 51.8
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 9.5e-50 201.1 197 53.3
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 3.6e-49 199.1 215 49.3
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 4.7e-49 198.7 217 49.3
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 8.0e-49 198.0 195 54.4
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 8.0e-49 198.0 221 49.3
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 8.9e-48 194.5 225 48.4
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 8.9e-48 194.5 221 47.5
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 2.0e-47 193.4 195 49.7
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 5.8e-47 191.8 221 46.6
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 1.7e-43 180.3 221 45.7
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 1.7e-43 180.3 221 45.7
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 8.6e-43 177.9 221 44.8
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 1.0e-27 127.9 158 46.8
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 3.3e-26 122.9 138 47.1
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 7.1e-21 105.1 216 31.5
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 2.7e-20 103.2 99 53.5
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 6.6e-19 98.6 209 34.0
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.4e-16 90.1 163 35.6
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 9.0e-16 88.2 85 48.2
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 6.4e-14 82.0 196 31.1
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.2e-12 77.8 215 28.8


User provided reference genes

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