Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 4.2e-124 448.0 217 100.0
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.4e-79 300.1 203 66.5
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 7.3e-76 287.7 194 67.5
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 5.2e-66 255.0 196 60.2
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 9.2e-63 244.2 196 60.2
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 1.2e-62 243.8 214 55.6
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 2.7e-62 242.7 202 56.9
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 2.7e-62 242.7 221 52.9
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 3.5e-62 242.3 193 58.5
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 4.6e-62 241.9 200 56.0
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.0e-61 240.7 196 57.1
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.3e-61 240.4 186 58.1
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.3e-61 240.4 204 54.4
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.7e-61 240.0 199 56.8
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 1.7e-61 240.0 199 57.3
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 6.6e-61 238.0 205 54.1
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 8.6e-61 237.7 191 58.6
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 1.9e-60 236.5 196 55.1
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 2.5e-60 236.1 192 58.3
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 2.5e-60 236.1 192 58.3
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 3.3e-60 235.7 200 55.5
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 3.3e-60 235.7 193 58.5
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 4.3e-60 235.3 203 56.7
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 7.3e-60 234.6 202 53.0
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 2.1e-59 233.0 201 54.2
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 2.8e-59 232.6 196 55.1
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.8e-59 232.6 196 54.6
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.8e-59 232.6 193 55.4
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 3.6e-59 232.3 201 56.7
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 3.6e-59 232.3 189 56.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.7e-59 231.9 205 52.7
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.7e-59 231.9 205 52.7
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 4.7e-59 231.9 196 55.6
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 6.2e-59 231.5 205 52.2
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 6.2e-59 231.5 193 57.0
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 8.1e-59 231.1 195 56.4
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 1.1e-58 230.7 196 56.1
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 1.4e-58 230.3 185 58.4
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.4e-58 230.3 200 54.0
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 3.1e-58 229.2 206 52.4
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 3.1e-58 229.2 194 56.2
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 3.1e-58 229.2 206 51.0
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 5.2e-58 228.4 197 52.8
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 8.9e-58 227.6 208 55.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 8.9e-58 227.6 192 53.6
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 8.9e-58 227.6 193 57.0
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 8.9e-58 227.6 196 56.1
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 8.9e-58 227.6 193 54.9
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 8.9e-58 227.6 191 56.5
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 8.9e-58 227.6 203 53.2
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.5e-57 226.9 196 55.6
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 3.4e-57 225.7 192 55.2
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 4.4e-57 225.3 187 58.8
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 4.4e-57 225.3 187 59.4
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 5.8e-57 224.9 209 53.6
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 5.8e-57 224.9 189 58.2
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 7.6e-57 224.6 200 55.0
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.7e-56 223.4 195 55.9
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 1.7e-56 223.4 187 58.3
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 3.8e-56 222.2 187 57.2
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 4.9e-56 221.9 196 54.6
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 6.4e-56 221.5 197 54.3
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 8.4e-56 221.1 214 50.0
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 1.4e-55 220.3 192 53.6
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 4.2e-55 218.8 196 52.0
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 9.3e-55 217.6 196 52.0
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.6e-54 216.9 199 54.8
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.6e-54 216.9 192 53.6
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 2.1e-54 216.5 196 53.1
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.0e-54 214.9 198 51.5
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 3.0e-53 212.6 205 48.3
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 2.8e-51 206.1 172 56.4
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 9.0e-50 201.1 193 52.3
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 9.9e-49 197.6 175 54.9
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 6.4e-48 194.9 168 56.0
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 7.1e-47 191.4 187 51.9
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 7.4e-44 181.4 149 57.7
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 1.8e-42 176.8 146 54.8
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 9.9e-41 171.0 192 43.2
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 1.2e-38 164.1 123 61.0
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 5.1e-37 158.7 159 51.6
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 7.6e-33 144.8 204 41.7
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 7.1e-31 138.3 93 64.5
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.0e-29 134.4 137 48.9
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.8e-29 133.7 199 36.2
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 5.1e-29 132.1 122 58.2
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 1.6e-27 127.1 191 37.2
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.0e-24 117.9 169 42.0
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 4.6e-22 109.0 88 54.5
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.5e-16 88.6 92 45.7
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 1.4e-15 87.4 92 48.9
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 2.1e-14 83.6 94 45.7
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 6.1e-14 82.0 83 51.8
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 3.8e-08 62.8 73 45.2


User provided reference genes

Program Settings