Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0015s0073 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 7609.6 3862 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2769 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 4562.3 3645 62.9
Mapoly0043s0089 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 4539.2 3521 64.4
Pp3c23_17280 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 4303.1 3629 60.6
PRCOL_00006702 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 3713.3 3600 53.6
Cre05.g244250 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 3650.5 3650 52.9
MCO10G182 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 3508.0 3318 54.7
Mapoly0022s0169 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 3223.0 3615 47.6
SMO364G0392 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 3221.4 3573 48.1
Cre02.g141606 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 3151.7 3593 47.1
PRCOL_00001499 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 3134.4 3374 49.4
MCO12G056 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 3074.6 3422 48.2
SMO367G1221 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 3002.6 2208 67.3
Mapoly0035s0021 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 2919.8 3650 44.5
SMO116G0311 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 2910.6 3041 50.2
MCO02G109 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 2894.4 3252 47.3
Pp3c12_9940 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 2892.1 3162 48.0
Cre02.g107050 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2882.4 3154 48.4
Cre09.g392282 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2867.4 3633 44.1
Cre16.g685450 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2858.9 3219 47.8
CBR_g5736 Chara braunii HOM05D005521 ORTHO05D008962 0.0e+00 2858.6 3577 43.9
Cre12.g555950 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2803.9 3459 44.4
PRCOL_00006732 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 2795.0 3509 44.9
PRCOL_00006358 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 2766.1 3604 43.0
Mapoly0032s0050 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 2749.5 3574 42.8
MCO02G369 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 2717.6 3625 42.4
Pp3c27_6210 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 2716.8 3426 43.2
Pp3c6_28550 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 2702.2 3423 43.5
Pp3c20_6270 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 2583.5 2797 48.8
Cre02.g107350 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2523.8 3404 42.9
Mapoly0083s0015 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 2290.4 3184 41.1
MCO09G678 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 2275.7 3538 37.3
SMO117G0259 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 2275.4 3045 41.8
Cre14.g627576 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2273.8 3256 40.8
PRCOL_00006448 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 2263.4 3594 37.8
Pp3c7_8280 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 2252.2 3116 40.9
SMO011G0045 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 2174.1 2596 47.0
AagrBONN_evm.TU.Sc2ySwM_228.4355 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 2107.4 2414 47.0
Cre14.g624950 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 2064.7 3568 36.0
MCO12G412 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 2029.6 3513 35.8
CBR_g39582 Chara braunii HOM05D005521 ORTHO05D008962 0.0e+00 2017.7 3599 35.3
SMO332G0013 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 1992.6 3459 35.2
PRCOL_00002002 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 1982.2 3479 34.6
Mapoly0004s0117 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 1913.3 3382 35.4
AagrBONN_evm.TU.Sc2ySwM_344.5243 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 1909.0 2903 37.7
Pp3c17_1970 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 1894.4 3098 36.4
PRCOL_00003512 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 1875.5 3472 34.0
SMO352G0080 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 1865.1 3479 33.6
AagrBONN_evm.TU.Sc2ySwM_228.3514 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 1858.6 3486 33.5
MCO11G302 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 1852.0 3384 34.2
Cre12.g484250 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 1811.2 3512 32.3
Cre06.g265950 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 1770.4 3858 32.1
MCO08G072 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 1758.4 3490 32.9
Pp3c22_18230 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 1747.6 3056 34.9
Pp3c22_18240 Physcomitrium patens HOM05D005521 ORTHO05D008962 0.0e+00 1747.6 3056 34.9
CBR_g23890 Chara braunii HOM05D005521 ORTHO05D008962 0.0e+00 1745.3 3495 32.2
MCO13G141 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 1734.9 3440 32.5
PRCOL_00005933 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 1711.8 3413 31.9
AagrBONN_evm.TU.Sc2ySwM_117.525 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 1688.7 1506 56.7
Mapoly0064s0039 Marchantia polymorpha HOM05D005521 ORTHO05D008962 0.0e+00 1622.8 2639 36.3
PRCOL_00005693 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 1585.1 3131 32.7
Cre09.g403800 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 1578.1 3126 32.0
Cre03.g145127 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 1469.9 3267 30.7
PRCOL_00005761 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 0.0e+00 1443.3 3053 31.6
MCO14G480 Micromonas commoda HOM05D005521 ORTHO05D008962 0.0e+00 1405.6 3152 29.8
AagrBONN_evm.TU.Sc2ySwM_117.2559 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 1350.9 1816 41.6
Cre11.g476050 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 0.0e+00 1343.2 2461 34.5
AagrBONN_evm.TU.Sc2ySwM_362.572 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 1319.7 1604 45.6
AagrBONN_evm.TU.Sc2ySwM_362.573 Anthoceros agrestis HOM05D005521 ORTHO05D008962 0.0e+00 1139.8 1525 43.1
SMO367G0359 Selaginella moellendorffii HOM05D005521 ORTHO05D008962 0.0e+00 1134.8 811 69.5
Cfa025692 Carpinus fangiana HOM05D005521 ORTHO05D008962 0.0e+00 1108.2 3438 26.4
Cre06.g250300 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D017330 0.0e+00 1086.2 3374 26.4
CBR_g12673 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-311 1073.2 3190 26.9
Mapoly0070s0015 Marchantia polymorpha HOM05D005521 ORTHO05D008962 2.4e-310 1070.8 3379 25.9
MCO14G126 Micromonas commoda HOM05D005521 ORTHO05D017330 4.4e-309 1066.6 3348 26.7
CBR_g34182 Chara braunii HOM05D000019 ORTHO05D008962 9.6e-304 1048.9 863 60.8
CBR_g53503 Chara braunii HOM05D005521 ORTHO05D008962 3.9e-297 1026.9 979 53.1
PRCOL_00001970 Prasinoderma coloniale HOM05D005521 ORTHO05D017330 8.2e-295 1019.2 3013 27.3
AagrBONN_evm.TU.Sc2ySwM_117.524 Anthoceros agrestis HOM05D005521 ORTHO05D008962 2.3e-289 1001.1 1008 50.8
Cre06.g297850 Chlamydomonas reinhardtii HOM05D005521 ORTHO05D008962 5.3e-286 989.9 3374 24.9
Mapoly0108s0011 Marchantia polymorpha HOM05D005521 ORTHO05D017330 1.1e-275 955.7 3177 25.6
CBR_g34178 Chara braunii HOM05D000409 ORTHO05D008962 5.7e-272 943.3 976 50.1
CBR_g45840 Chara braunii HOM05D000019 ORTHO05D008962 7.8e-221 773.5 1558 33.0
CBR_g57824 Chara braunii HOM05D005521 ORTHO05D008962 5.4e-214 750.7 3402 22.9
CBR_g64 Chara braunii HOM05D005521 ORTHO05D008962 3.9e-212 744.6 1075 40.5
CBR_g45837 Chara braunii HOM05D005521 ORTHO05D008962 1.2e-208 733.0 1249 35.4
CBR_g26004 Chara braunii HOM05D005521 ORTHO05D008962 4.6e-205 721.1 749 50.9
CBR_g62 Chara braunii HOM05D005521 ORTHO05D008962 9.0e-201 706.8 1045 39.7
PRCOL_00001999 Prasinoderma coloniale HOM05D005521 ORTHO05D008962 3.8e-183 648.3 2614 24.1
CBR_g4417 Chara braunii HOM05D005521 ORTHO05D008962 1.3e-180 639.8 2175 25.4
AagrBONN_evm.TU.Sc2ySwM_117.2560 Anthoceros agrestis HOM05D005521 ORTHO05D008962 8.5e-167 594.0 1365 32.1
CBR_g51641 Chara braunii HOM05D005521 ORTHO05D008962 7.7e-144 517.7 482 50.6
CBR_g22156 Chara braunii HOM05D005521 ORTHO05D008962 4.2e-142 511.9 644 42.7
CBR_g57822 Chara braunii HOM05D005521 ORTHO05D008962 2.8e-125 456.1 745 34.2
Pp3c20_6280 Physcomitrium patens HOM05D005521 ORTHO05D008962 1.7e-122 446.8 464 48.1
AagrBONN_evm.TU.Sc2ySwM_344.1203 Anthoceros agrestis HOM05D005521 ORTHO05D008962 2.1e-101 376.7 1097 27.1
CBR_g31470 Chara braunii HOM05D000019 ORTHO05D000353 4.7e-93 349.0 190 88.4
CBR_g52364 Chara braunii HOM05D000019 ORTHO05D000002 6.4e-90 338.6 564 35.6
CBR_g31015 Chara braunii HOM05D005521 ORTHO05D000002 1.3e-87 330.9 516 38.0
CBR_g53520 Chara braunii HOM05D005521 ORTHO05D008962 4.8e-85 322.4 235 64.3
AagrBONN_evm.TU.Sc2ySwM_344.4755 Anthoceros agrestis HOM05D005521 ORTHO05D008962 9.3e-81 308.1 445 44.3
CBR_g51368 Chara braunii HOM05D005521 ORTHO05D038443 3.0e-79 303.1 279 55.9
Pp3c22_18130 Physcomitrium patens HOM05D005521 ORTHO05D000001 3.3e-78 299.7 632 30.4
CBR_g34179 Chara braunii HOM05D005521 ORTHO05D008962 5.6e-78 298.9 335 45.1
AagrBONN_evm.TU.Sc2ySwM_344.4756 Anthoceros agrestis HOM05D005521 ORTHO05D008962 4.6e-72 279.3 220 66.4
AagrBONN_evm.TU.Sc2ySwM_344.4551 Anthoceros agrestis HOM05D005521 ORTHO05D008962 4.0e-68 266.2 286 54.5
CBR_g38121 Chara braunii HOM05D005521 ORTHO05D017330 3.8e-66 259.6 1601 20.2
CBR_g52377 Chara braunii HOM05D005521 ORTHO05D008962 8.7e-63 248.4 282 49.6
AagrBONN_evm.TU.Sc2ySwM_228.4356 Anthoceros agrestis HOM05D005521 ORTHO05D038443 2.5e-62 246.9 240 50.0
CBR_g31001 Chara braunii HOM05D005521 ORTHO05D008962 4.5e-59 236.1 362 38.1
AagrBONN_evm.TU.Sc2ySwM_344.4757 Anthoceros agrestis HOM05D005521 ORTHO05D008962 2.7e-56 226.9 152 73.7
CBR_g54114 Chara braunii HOM05D000019 ORTHO05D000002 8.2e-53 215.3 206 50.5
SMO269G0026 Selaginella moellendorffii HOM05D005521 ORTHO05D376179 2.1e-40 174.1 334 30.8
CBR_g38132 Chara braunii HOM05D005521 ORTHO05D000014 9.1e-36 158.7 168 46.4
CBR_g31463 Chara braunii HOM05D008971 ORTHO05D011892 1.4e-31 144.8 99 69.7
CBR_g54073 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-29 138.3 162 46.3
CBR_g57826 Chara braunii HOM05D005521 ORTHO05D008962 2.8e-29 137.1 253 32.0
AagrBONN_evm.TU.Sc2ySwM_344.1202 Anthoceros agrestis HOM05D005521 ORTHO05D008962 3.1e-28 133.7 329 27.1
CBR_g65 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-27 129.8 132 44.7
CBR_g49351 Chara braunii HOM05D005521 ORTHO05D008962 1.0e-26 128.6 304 27.6
CBR_g4416 Chara braunii HOM05D005521 ORTHO05D008962 6.5e-26 125.9 155 42.6
AagrBONN_evm.TU.Sc2ySwM_117.2295 Anthoceros agrestis HOM05D005521 ORTHO05D017330 1.6e-24 121.3 337 24.9
AagrBONN_evm.TU.Sc2ySwM_117.2296 Anthoceros agrestis HOM05D005521 ORTHO05D017330 2.3e-23 117.5 547 20.8
CBR_g31474 Chara braunii HOM05D000019 ORTHO05D000002 2.4e-20 107.5 104 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4739 Anthoceros agrestis HOM05D005521 ORTHO05D008962 1.6e-19 104.8 86 62.8
Pp3c1_36760 Physcomitrium patens HOM05D005521 ORTHO05D319434 1.0e-18 102.1 130 37.7
AagrBONN_evm.TU.Sc2ySwM_344.4543 Anthoceros agrestis HOM05D005521 ORTHO05D008962 1.0e-15 92.0 55 80.0
Pp3c22_18120 Physcomitrium patens HOM05D005521 ORTHO05D008962 1.0e-15 92.0 184 29.3
CBR_g4424 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-14 88.2 368 24.5
CBR_g31471 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-13 83.6 69 59.4
CBR_g25996 Chara braunii HOM05D008123 ORTHO05D000800 7.0e-12 79.3 67 61.2
CBR_g31488 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-10 74.7 96 36.5
CBR_g25977 Chara braunii HOM05D008586 ORTHO05D000301 5.5e-09 69.7 70 58.6
AagrBONN_evm.TU.Sc2ySwM_344.4550 Anthoceros agrestis HOM05D005521 ORTHO05D074353 3.0e-07 63.9 112 31.2


User provided reference genes

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